Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq106 96.9 8e-15
seq297 91.5 3e-13
>seq106
Length=24021
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | || || |||||||||| ||||||||||| |||||| || ||
Sbjct 4156 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 4215
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || || || || ||||| | | || || || || ||| ||||||
Sbjct 4216 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 4275
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || || || || | |||||| | | ||| || ||||| || ||
Sbjct 4276 GTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 4335
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | || || || ||||||||
Sbjct 4336 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTG 4368
>seq297
Length=71103
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 34784 TCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 34725
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||| | || || || ||||| || | | || || || || ||| ||||||
Sbjct 34724 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 34665
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || || ||| || | |||||| | | ||| || ||||| |||||
Sbjct 34664 ATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 34605
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | ||| || || ||||||||
Sbjct 34604 AGTTTTACCAGTTAAAGTCTTGACGAAAATTTG 34572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178916056489589
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |