Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq106 96.9 8e-15 seq297 91.5 3e-13 >seq106 Length=24021 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | || || |||||||||| ||||||||||| |||||| || || Sbjct 4156 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 4215 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || || ||||| | | || || || || ||| |||||| Sbjct 4216 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 4275 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || || || | |||||| | | ||| || ||||| || || Sbjct 4276 GTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 4335 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | || || || |||||||| Sbjct 4336 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTG 4368 >seq297 Length=71103 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 34784 TCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 34725 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| | || || || ||||| || | | || || || || ||| |||||| Sbjct 34724 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 34665 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || ||| || | |||||| | | ||| || ||||| ||||| Sbjct 34664 ATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 34605 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | ||| || || |||||||| Sbjct 34604 AGTTTTACCAGTTAAAGTCTTGACGAAAATTTG 34572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178916056489589