Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq181 134 2e-26 >seq181 Length=15068 Score = 134 bits (148), Expect = 2e-26 Identities = 194/274 (71%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805 ||||||||| | |||| | ||||| |||||| |||| | || ||||| ||||| || Sbjct 3703 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 3644 Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 ||||||||| || ||||| || || ||| ||||| || || || |||||||| || Sbjct 3643 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 3584 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925 | || |||||| ||| || ||| | | ||||| |||| |||||||| || Sbjct 3583 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 3524 Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985 ||||| | ||||| ||||| || ||| ||||| || || || ||| || ||||||| Sbjct 3523 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 3464 Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019 || |||| ||||| | ||||||||| || Sbjct 3463 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 3430 Score = 132 bits (146), Expect = 6e-26 Identities = 272/394 (69%), Gaps = 18/394 (5%) Strand=Plus/Minus Query 154702 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAG 154759 |||| |||||||| | |||||||| |||| ||| || ||||| |||||||| ||| Sbjct 2729 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 2672 Query 154760 TGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819 ||||| ||| | || |||||||||| || || ||| | ||||| || || Sbjct 2671 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 2612 Query 154820 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 154875 | ||||| || | ||||| | | || |||| || |||| || | ||||| Sbjct 2611 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 2556 Query 154876 TGATTACATACCCATCTACACATGGTGTATTTGAAAC---TAACATTAGACAGATATGTA 154932 ||||||| || |||||||| ||||| |||||||| | | || ||| || ||| | Sbjct 2555 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCA--AGAGAGCTAT-TG 2499 Query 154933 AGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGG 154992 | || |||||||| |||||||| || ||||||||||| || ||| | ||||| || | Sbjct 2498 ATATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAG 2439 Query 154993 TAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAA 155052 | || || | ||| |||| | ||||| ||||| |||||| | || | ||||||| Sbjct 2438 TTGGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAA 2379 Query 155053 CATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 155086 | || | | ||||| ||||| ||||| || Sbjct 2378 CTTTTGCTTTGAGTCATGGTGGTGGTGGTCCAGG 2345 Score = 95.1 bits (104), Expect = 1e-14 Identities = 179/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 153168 AAAAATATAGCAAAAGCAAACAAAGTAAAACCTAGTCTTATAGGTCAAGGATACTATGGA 153227 |||||| |||| || ||| ||| ||||| | | | || ||| |||| || || Sbjct 4294 AAAAAT-TAGCTAATAAAAATAAAATAAAAAATCCT-TCATTGGTAAAGGTTATGCCGGT 4237 Query 153228 ACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCT 153287 |||||| ||| || || || || |||| ||||||| ||| ||||| || ||| Sbjct 4236 ACCATTTTACCACCTGTTATTCAAAGAAATCTTCTTGAATCTCCAGAATGGTATACTTCT 4177 Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 ||||| || |||||| | || || ||||| || ||||| | | || || || |||||| Sbjct 4176 TACACACCATATCAACCAGAAATTTCTCAAGGTAGATTAAATTCCTTGTTGAACTACCAA 4117 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | || || |||||||| || || || || || ||| |||||||||||| Sbjct 4116 ACTTTAATTACTTCCCTTACAGGTTTGGACATGGCTAATGCTTCTTTATTAGATGAAGGT 4057 Query 153408 ACTGCAGCAGCAGAAGCAATG 153428 || || || | ||||| ||| Sbjct 4056 ACCGCTGCTGGGGAAGCCATG 4036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210142861280