Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq181 134 2e-26
>seq181
Length=15068
Score = 134 bits (148), Expect = 2e-26
Identities = 194/274 (71%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805
||||||||| | |||| | ||||| |||||| |||| | || ||||| ||||| ||
Sbjct 3703 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 3644
Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865
||||||||| || ||||| || || ||| ||||| || || || |||||||| ||
Sbjct 3643 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 3584
Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925
| || |||||| ||| || ||| | | ||||| |||| |||||||| ||
Sbjct 3583 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 3524
Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985
||||| | ||||| ||||| || ||| ||||| || || || ||| || |||||||
Sbjct 3523 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 3464
Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019
|| |||| ||||| | ||||||||| ||
Sbjct 3463 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 3430
Score = 132 bits (146), Expect = 6e-26
Identities = 272/394 (69%), Gaps = 18/394 (5%)
Strand=Plus/Minus
Query 154702 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAG 154759
|||| |||||||| | |||||||| |||| ||| || ||||| |||||||| |||
Sbjct 2729 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 2672
Query 154760 TGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819
||||| ||| | || |||||||||| || || ||| | ||||| || ||
Sbjct 2671 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 2612
Query 154820 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 154875
| ||||| || | ||||| | | || |||| || |||| || | |||||
Sbjct 2611 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 2556
Query 154876 TGATTACATACCCATCTACACATGGTGTATTTGAAAC---TAACATTAGACAGATATGTA 154932
||||||| || |||||||| ||||| |||||||| | | || ||| || ||| |
Sbjct 2555 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCA--AGAGAGCTAT-TG 2499
Query 154933 AGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGG 154992
| || |||||||| |||||||| || ||||||||||| || ||| | ||||| || |
Sbjct 2498 ATATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAG 2439
Query 154993 TAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAA 155052
| || || | ||| |||| | ||||| ||||| |||||| | || | |||||||
Sbjct 2438 TTGGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAA 2379
Query 155053 CATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 155086
| || | | ||||| ||||| ||||| ||
Sbjct 2378 CTTTTGCTTTGAGTCATGGTGGTGGTGGTCCAGG 2345
Score = 95.1 bits (104), Expect = 1e-14
Identities = 179/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Minus
Query 153168 AAAAATATAGCAAAAGCAAACAAAGTAAAACCTAGTCTTATAGGTCAAGGATACTATGGA 153227
|||||| |||| || ||| ||| ||||| | | | || ||| |||| || ||
Sbjct 4294 AAAAAT-TAGCTAATAAAAATAAAATAAAAAATCCT-TCATTGGTAAAGGTTATGCCGGT 4237
Query 153228 ACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCT 153287
|||||| ||| || || || || |||| ||||||| ||| ||||| || |||
Sbjct 4236 ACCATTTTACCACCTGTTATTCAAAGAAATCTTCTTGAATCTCCAGAATGGTATACTTCT 4177
Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347
||||| || |||||| | || || ||||| || ||||| | | || || || ||||||
Sbjct 4176 TACACACCATATCAACCAGAAATTTCTCAAGGTAGATTAAATTCCTTGTTGAACTACCAA 4117
Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407
|| | || || |||||||| || || || || || ||| ||||||||||||
Sbjct 4116 ACTTTAATTACTTCCCTTACAGGTTTGGACATGGCTAATGCTTCTTTATTAGATGAAGGT 4057
Query 153408 ACTGCAGCAGCAGAAGCAATG 153428
|| || || | ||||| |||
Sbjct 4056 ACCGCTGCTGGGGAAGCCATG 4036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579210142861280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |