Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq181 145 9e-30 >seq181 Length=15068 Score = 145 bits (160), Expect = 9e-30 Identities = 297/431 (69%), Gaps = 14/431 (3%) Strand=Plus/Minus Query 159377 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATC 159434 |||| |||||||| | |||||||| |||| ||| || ||||| |||||||| || || Sbjct 2729 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 2672 Query 159435 AGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGA 159494 || | ||| | || |||||||||| || || ||| | |||| || || Sbjct 2671 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 2612 Query 159495 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 159550 | ||||| || | ||||| | | || |||| || |||| || | ||||| Sbjct 2611 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 2556 Query 159551 TGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAG 159609 ||||||| ||||||||||| ||||| |||||||| || ||| || || ||| | | Sbjct 2555 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCAAGAGAGCTAT-TGAT 2497 Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 ||||||||||| |||||||| || |||||||||||||| ||| | ||||| || || Sbjct 2496 ATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAGTT 2437 Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729 ||| || | ||| |||| | ||||| ||||| |||||| | || | ||||| || Sbjct 2436 GGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAACT 2377 Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789 || | | ||||| ||||| ||||| || || || || |||| | ||||| Sbjct 2376 TTTGCTTTGAGTCATGGTGGTGGTGGTCCAGGTCAAGCACCAGTTTGTGTTAAAGAACAT 2317 Query 159790 CTCACACCATT 159800 | | |||||| Sbjct 2316 TTAAAACCATT 2306 Score = 138 bits (152), Expect = 1e-27 Identities = 195/274 (71%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480 ||| ||||| | |||| | ||||| |||||| |||| | || || || ||||| || Sbjct 3703 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 3644 Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 ||||||||| || ||||| || || ||| ||||| || || || |||||||| || Sbjct 3643 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 3584 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | || |||||| ||| || ||| | | ||||| |||| |||||||| || Sbjct 3583 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 3524 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 ||||| | |||||| ||||| || ||| ||||| || ||||||||| || ||||||| Sbjct 3523 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 3464 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCA 158694 || |||| ||||| | ||||||||| || Sbjct 3463 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 3430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048502315120