Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq181 145 9e-30
>seq181
Length=15068
Score = 145 bits (160), Expect = 9e-30
Identities = 297/431 (69%), Gaps = 14/431 (3%)
Strand=Plus/Minus
Query 159377 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATC 159434
|||| |||||||| | |||||||| |||| ||| || ||||| |||||||| || ||
Sbjct 2729 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 2672
Query 159435 AGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGA 159494
|| | ||| | || |||||||||| || || ||| | |||| || ||
Sbjct 2671 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 2612
Query 159495 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 159550
| ||||| || | ||||| | | || |||| || |||| || | |||||
Sbjct 2611 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 2556
Query 159551 TGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAG 159609
||||||| ||||||||||| ||||| |||||||| || ||| || || ||| | |
Sbjct 2555 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCAAGAGAGCTAT-TGAT 2497
Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669
||||||||||| |||||||| || |||||||||||||| ||| | ||||| || ||
Sbjct 2496 ATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAGTT 2437
Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729
||| || | ||| |||| | ||||| ||||| |||||| | || | ||||| ||
Sbjct 2436 GGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAACT 2377
Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789
|| | | ||||| ||||| ||||| || || || || |||| | |||||
Sbjct 2376 TTTGCTTTGAGTCATGGTGGTGGTGGTCCAGGTCAAGCACCAGTTTGTGTTAAAGAACAT 2317
Query 159790 CTCACACCATT 159800
| | ||||||
Sbjct 2316 TTAAAACCATT 2306
Score = 138 bits (152), Expect = 1e-27
Identities = 195/274 (71%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480
||| ||||| | |||| | ||||| |||||| |||| | || || || ||||| ||
Sbjct 3703 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 3644
Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540
||||||||| || ||||| || || ||| ||||| || || || |||||||| ||
Sbjct 3643 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 3584
Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600
| || |||||| ||| || ||| | | ||||| |||| |||||||| ||
Sbjct 3583 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 3524
Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660
||||| | |||||| ||||| || ||| ||||| || ||||||||| || |||||||
Sbjct 3523 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 3464
Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCA 158694
|| |||| ||||| | ||||||||| ||
Sbjct 3463 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 3430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588048502315120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |