Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq259 118 1e-21
seq132 118 1e-21
>seq259
Length=87679
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104867 GAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTT 104926
|||||||||||| | || || | ||| || |||| | |||| | | ||||||
Sbjct 62936 GAATTATTATGGTTTATTGCTGGATCAACCGATGCTAAAATTTTAACCAACAAAGGTGTT 62995
Query 104927 AAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTT-TCG 104985
||| | ||| | | |||||| || ||| ||||||||||| | ||||| ||| |||
Sbjct 62996 AAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATTG-ACTCATCG 63054
Query 104986 AAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATA 105045
||||||||||| |||||| ||||||| || ||||||||||| ||| ||| ||||
Sbjct 63055 TCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATA 63114
Query 105046 TATCGACTGTGATACCGACTATACCGGCCAAGGT 105079
|| || |||||| | || ||||| || ||||||
Sbjct 63115 TAAAGATTGTGATGCTGATTATACTGGACAAGGT 63148
>seq132
Length=62843
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 104867 GAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTT 104926
|||||||||||| | || || | ||| || |||| | |||| | | ||||||
Sbjct 30893 GAATTATTATGGTTTATTGCTGGATCAACCGATGCTAAAATTTTAACCAACAAAGGTGTT 30834
Query 104927 AAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTT-TCG 104985
||| | ||| | | |||||| || ||| ||||||||||| | ||||| ||| |||
Sbjct 30833 AAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATTG-ACTCATCG 30775
Query 104986 AAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATA 105045
||||||||||| |||||| ||||||| || ||||||||||| ||| ||| ||||
Sbjct 30774 TCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATA 30715
Query 105046 TATCGACTGTGATACCGACTATACCGGCCAAGGT 105079
|| || |||||| | || ||||| || ||||||
Sbjct 30714 TAAAGATTGTGATGCTGATTATACTGGACAAGGT 30681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658400179575320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |