Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq250 446 2e-120 seq307 443 2e-119 seq325 349 4e-91 seq51 349 4e-91 seq124 255 7e-63 >seq250 Length=32566 Score = 446 bits (494), Expect = 2e-120 Identities = 690/977 (71%), Gaps = 16/977 (2%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAA-----TTCTCT-TCATTAGAATT---CATTAC 18662 ||| ||||| |||| |||| |||| | |||||| || | || || ||| || Sbjct 29549 TTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATAAC 29490 Query 18663 TCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGA 18722 || |||||| || || | |||||| ||||| || || || ||||| || | || || Sbjct 29489 ACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGA 29430 Query 18723 TATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTC 18782 ||| |||||| ||||| ||||| || | ||||| || | ||| ||| || || | Sbjct 29429 AATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACCCAAGGC 29370 Query 18783 TAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCC 18842 |||| || |||||| || ||| ||| || |||| ||||| ||||| ||||| || Sbjct 29369 AAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACC 29310 Query 18843 TATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGA 18902 | ||| ||| || || ||||| || | | |||||| ||| | || || || || Sbjct 29309 CAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAAC 29250 Query 18903 TATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACA 18962 ||||| | |||| | ||| | || || | | | || |||| |||||| Sbjct 29249 AATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAACAAACA 29190 Query 18963 TGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACC 19022 ||||||||| ||||| || || ||||||| ||||||||||| || || || ||||| Sbjct 29189 AGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCAAACC 29130 Query 19023 AGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATAT 19082 ||||||| ||||| ||||| |||||||| |||||||||||||| ||| ||||| || Sbjct 29129 TGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGAAAAT 29070 Query 19083 ACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAAT 19142 |||||| | || ||||||||||| | |||||| |||| |||||| |||| ||||| Sbjct 29069 ACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCTTGAAT 29010 Query 19143 CCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAA 19202 |||||| | ||||| ||||| ||||| | | |||||| || | || || | |||||| Sbjct 29009 CCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCATTAAA 28950 Query 19203 TAGATACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261 | | | || || || | || ||||||||||| | || || |||||| ||||||| Sbjct 28949 CA-AGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATACATTT 28891 Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCT 19321 | |||||||| ||||| || || || || || || || || | ||||||| | | Sbjct 28890 CAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGCAGTT 28831 Query 19322 GTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAA 19381 | |||||| | |||| |||| | ||| |||||| ||| || |||||| ||| || | Sbjct 28830 GGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGCAGCGA 28771 Query 19382 AAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAAT 19438 |||| ||||| || || ||||| |||||||| ||||| | ||||||| Sbjct 28770 AAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTTCCAAT 28711 Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498 ||| | ||||||| |||||| ||||||||| ||||| || || || || ||||||| Sbjct 28710 CATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCGGCTTTTT 28651 Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT 19558 |||| | ||||| || ||| |||||| || ||||| |||||| | | | ||| |||| Sbjct 28650 TATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATAACGACGTTTGTTTT 28591 Query 19559 CTT-TAAGAATAGGTTC 19574 ||| ||| ||| ||||| Sbjct 28590 CTTGTAATAAT-GGTTC 28575 >seq307 Length=48190 Score = 443 bits (490), Expect = 2e-119 Identities = 689/977 (71%), Gaps = 16/977 (2%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAA-----TTCTCT-TCATTAGAATT---CATTAC 18662 ||| ||||| |||| |||| |||| | |||||| || | || || ||| || Sbjct 40063 TTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATAAC 40004 Query 18663 TCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGA 18722 || |||||| || || | |||||| ||||| || || || ||||| || | || || Sbjct 40003 ACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGA 39944 Query 18723 TATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTC 18782 ||| |||||| ||||| ||||| || | ||||| || | ||| ||| || || | Sbjct 39943 AATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACCCAAGGC 39884 Query 18783 TAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCC 18842 |||| || |||||| || ||| ||| || |||| ||||| ||||| ||||| || Sbjct 39883 AAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACC 39824 Query 18843 TATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGA 18902 | ||| ||| || || ||||| || | | |||||| ||| | || || || || Sbjct 39823 CAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAAC 39764 Query 18903 TATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACA 18962 ||||| | |||| | ||| | || || | | | || |||| |||||| Sbjct 39763 AATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAACAAACA 39704 Query 18963 TGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACC 19022 ||||||||| ||||| || || ||||||| ||||||||||| || || || ||||| Sbjct 39703 AGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCAAACC 39644 Query 19023 AGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATAT 19082 ||||||| ||||| ||||| |||||||| |||||||||||||| ||| ||||| || Sbjct 39643 TGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGAAAAT 39584 Query 19083 ACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAAT 19142 |||||| | || ||||||||||| | |||||| |||| |||||| |||| ||||| Sbjct 39583 ACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCTTGAAT 39524 Query 19143 CCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAA 19202 |||||| | ||||| ||||| ||||| | | |||||| || | || || | |||||| Sbjct 39523 CCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCATTAAA 39464 Query 19203 TAGATACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261 | | | || || || | || ||||||||||| | || || |||||| ||||||| Sbjct 39463 CA-AGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATACATTT 39405 Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCT 19321 | |||||||| ||||| || || || || || || || || | ||||||| | | Sbjct 39404 CAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGCAGTT 39345 Query 19322 GTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAA 19381 | ||||| | |||| |||| | ||| |||||| ||| || |||||| ||| || | Sbjct 39344 GGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGCAGCGA 39285 Query 19382 AAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAAT 19438 |||| ||||| || || ||||| |||||||| ||||| | ||||||| Sbjct 39284 AAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTTCCAAT 39225 Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498 ||| | ||||||| |||||| ||||||||| ||||| || || || || ||||||| Sbjct 39224 CATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCGGCTTTTT 39165 Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT 19558 |||| | ||||| || ||| |||||| || ||||| |||||| | | | ||| |||| Sbjct 39164 TATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATAACGACGTTTGTTTT 39105 Query 19559 CTT-TAAGAATAGGTTC 19574 ||| ||| ||| ||||| Sbjct 39104 CTTGTAATAAT-GGTTC 39089 >seq325 Length=13538 Score = 349 bits (386), Expect = 4e-91 Identities = 1432/2249 (64%), Gaps = 72/2249 (3%) Strand=Plus/Minus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| || || |||||||||||||| ||||| |||| ||||||||||||||||| Sbjct 12573 GTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTT 12514 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132 || |||||| | | || ||| ||| |||||||| | ||||||| |||||||| Sbjct 12513 GTCAATTTACCCATAGTTGGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATG 12454 Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192 || ||| |||||||||| |||||||| | ||| |||||| || ||||| || || Sbjct 12453 AAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTC 12394 Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTCCgttt 47249 || || | || || || ||||||| || | | ||| || || || ||| Sbjct 12393 TTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTG 12334 Query 47250 tctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgtttttaaA 47309 ||||| || | || | ||| ||||| ||| || || || Sbjct 12333 GAAATAATGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACCAAATCCTTCAAC 12274 Query 47310 AGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTT 47369 | | ||||| |||||||| ||||| |||| | ||||| | || || || Sbjct 12273 AAGTATGGATTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAA 12214 Query 47370 GTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATG 47429 || || ||||| | | ||||||| || || || ||||| | ||| || || || ||||| Sbjct 12213 GTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATT 12154 Query 47430 GATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTC 47489 | ||||| || ||| ||||| | |||| ||| |||| | | Sbjct 12153 GGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGCCATCTTTTGTTTCAAAGTATCC 12094 Query 47490 CAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTT 47549 |||||||| | || | ||| ||||| || ||| |||| | | |||| | Sbjct 12093 CAATCCCATAATTCAGTTGGTTTTCTGTTCCACAAGTCAAATTGTAATAAACCTTGAGAA 12034 Query 47550 ATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCT 47609 |||||||| || ||| ||| ||| | | ||| | |||| | | | Sbjct 12033 GCTGGAGAACCTGGGTAACTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAAGAT 11974 Query 47610 TCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCTTCTGA 47668 || | ||| || || || |||||||| |||| ||||||| |||| || |||||| Sbjct 11973 TCAACAGCAGCATGGTAAATGGTTTCAAAGATTTGAATGTTTA-ATTCTCTAGCTTCTTG 11915 Query 47669 TGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACC 47728 || ||||| || | || | ||| || || ||||||||||| | | | Sbjct 11914 AGAATCAAATGGCAATCTCAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGC 11855 Query 47729 AATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATC 47788 ||||||||| || | ||||||| ||||||||||| | ||| || | ||| ||| Sbjct 11854 AATTGGTCTGTGTCTCATATTAGATCTTTCAGCTTCTGGAACTGGGTAGTAGTTACGATC 11795 Query 47789 TATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATC 47848 |||| | | || | || ||| ||||| | ||| | Sbjct 11794 GATAACTCTGTTCAAGTTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTT 11735 Query 47849 AAAC------TTGTTATTTAT-------AACAAACCTATTAAGTGCTATAGATGCTAGAT 47895 | || ||| | || || |||||| | ||| || || || | | Sbjct 11734 ATACCAAGTATTGCT-TTCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGT 11676 Query 47896 TACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCAC 47955 |||| ||||| || |||| |||| || ||||| | |||||| ||| | || | Sbjct 11675 TACAAACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAG 11616 Query 47956 ATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015 ||||||| ||||||||| | || ||| | ||||||| || || || || | || Sbjct 11615 ATTTGATGACACCCAAATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACA 11556 Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAG-ATTCAATGATAGATTTCCAAACAGTCCTAGCC 48074 |||| || || |||||||| | || | | |||| ||||| | ||| | | | | | | Sbjct 11555 TAAATGGAGTACCAGTTTCGGTTTGGGCACTCAA-GATAGCGTACCATA-ATTTTTGGGC 11498 Query 48075 TTT-ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTC 48133 ||| || |||| | || || | ||||||| | |||||||| | |||||||| Sbjct 11497 TTTGATGGTTTGTCTACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTC 11438 Query 48134 ATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTC 48193 ||| || || |||| || || ||| |||||| ||| | | ||| | ||| || | Sbjct 11437 ATCACCGTAGACATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACC 11378 Query 48194 ATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCT 48253 | | || ||||| |||| || | |||||| ||||| | |||| || || || || Sbjct 11377 GTTTTGTTCAACTCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCT 11318 Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313 | ||| | |||||| || || ||| || ||| || | |||||| | |||||| Sbjct 11317 GGCTCTGATTTCTTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACT 11258 Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373 ||||||||||| || |||| || | ||||||||| || ||||| |||||||| | Sbjct 11257 GTGCCATGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAAC 11198 Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433 ||| | ||||| ||||| ||||||| | ||| || | |||||| || || ||||||| Sbjct 11197 ATAACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATT 11138 Query 48434 GGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCAC 48492 || || | ||| ||| ||| | | | || || || || || ||| ||||||| Sbjct 11137 AGTACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAA-ACCAATACCAC 11079 Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552 | || | || || |||| |||||| ||| | ||||| ||||| ||||| || || Sbjct 11078 CAGCACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAAT 11019 Query 48553 CATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAA 48612 |||| ||||| | | ||||| ||||||||| || || || | ||| | Sbjct 11018 CATCCTTCATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGA 10959 Query 48613 ATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAA 48672 | || ||| || | || | || || | | ||| | ||| ||||| |||||||||| Sbjct 10958 ACAAACATGGGGAACCGTGTGTGAAATATCTTTGTGACATCAAATTATAAGTTTCAATAA 10899 Query 48673 C----AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGA 48728 | |||| | | | || || ||||| |||| || | ||| | | || ||| Sbjct 10898 CTCTTGGAATATCTTTACC----GTGAATACCAATAGCAACTCTCATAATTAAATGTTGT 10843 Query 48729 GGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAA 48788 ||||||||| ||| ||| || || || | ||||||| |||||| ||||| ||| Sbjct 10842 GGTCTTTCAGCAACTTTACCGTTGATACGTAACAAATATGATCTTTCCATGGTTTTGAAA 10783 Query 48789 CCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCT 48846 ||||| |||||||| ||||| || | || | || ||| | ||| || | | || | Sbjct 10782 CCAAAGTAGTTGTAATTGAAA--TCTCTGTCGTAAACAATAGCTGAGTTCAATTCATCTT 10725 Query 48847 TATGTT-TAT-ATACTA-CATCCATTACATTTTTTGATAT--------AATTGATTCC-- 48893 ||||| || ||| || ||| || | ||| || || ||| | || Sbjct 10724 CATGTTCCATGATAATATCATAAGTT---TCTTTAGAAATCATAGGAGAATGTAAACCAG 10668 Query 48894 TT-----GTAAAGATCTTC---TACAACAT----CACT---AAATAtttttt--ttGTTT 48936 || || | || ||| || | | | ||| | |||| ||| | |||| Sbjct 10667 TTTTTGGGTTGACATATTCGTATAAAGCTTGAGAAACTTTGGAGTATTGTTTGGTAGTTT 10608 Query 48937 CTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTG 48996 |||||| | ||| || | || ||||| || ||||| | ||| ||||||||||| | | Sbjct 10607 GTTTATGTAAATTGGAGACAGCGATTCTGGCTGCTAAAACAGCGTAATCTGGATGCACGG 10548 Query 48997 TTGTACAT-GTACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCT 49055 | || ||| ||| || ||||| || ||||| |||||||||| ||||||| |||||| Sbjct 10547 TAGT-CATAGTAGCAGCAATTTCAGCAGCTAAGTTATCTAATTCAATAGTAGTAACACCT 10489 Query 49056 GTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATCCATATCC 49115 || | || ||| ||||| | || || || || | |||| ||| Sbjct 10488 TGGTAAACACCAGAAATGACTTTTTGGGTAATGGCGACCGGTTCGACGTGATTTGGATCT 10429 Query 49116 AGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTA 49175 | || ||||||||| ||| | ||| | |||||||||||||| | ||||||| Sbjct 10428 AAACCGTAACATAATCTTTGCACTCTGGCAGTAATTTTATCAAAACGGACTGGCTCTTTA 10369 Query 49176 CGACCGTCACGTTTTATAACAAACATCTT 49204 || || || | ||| | ||| |||| || Sbjct 10368 CGGCCATCTCTTTTAAAGACATACATGTT 10340 >seq51 Length=22326 Score = 349 bits (386), Expect = 4e-91 Identities = 1432/2249 (64%), Gaps = 72/2249 (3%) Strand=Plus/Minus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| || || |||||||||||||| ||||| |||| ||||||||||||||||| Sbjct 20842 GTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTT 20783 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132 || |||||| | | || ||| ||| |||||||| | ||||||| |||||||| Sbjct 20782 GTCAATTTACCCATAGTTGGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATG 20723 Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192 || ||| |||||||||| |||||||| | ||| |||||| || ||||| || || Sbjct 20722 AAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTC 20663 Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTCCgttt 47249 || || | || || || ||||||| || | | ||| || || || ||| Sbjct 20662 TTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTG 20603 Query 47250 tctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgtttttaaA 47309 ||||| || | || | ||| ||||| ||| || || || Sbjct 20602 GAAATAATGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACCAAATCCTTCAAC 20543 Query 47310 AGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTT 47369 | | ||||| |||||||| ||||| |||| | ||||| | || || || Sbjct 20542 AAGTATGGATTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAA 20483 Query 47370 GTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATG 47429 || || ||||| | | ||||||| || || || ||||| | ||| || || || ||||| Sbjct 20482 GTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATT 20423 Query 47430 GATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTC 47489 | ||||| || ||| ||||| | |||| ||| |||| | | Sbjct 20422 GGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGCCATCTTTTGTTTCAAAGTATCC 20363 Query 47490 CAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTT 47549 |||||||| | || | ||| ||||| || ||| |||| | | |||| | Sbjct 20362 CAATCCCATAATTCAGTTGGTTTTCTGTTCCACAAGTCAAATTGTAATAAACCTTGAGAA 20303 Query 47550 ATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCT 47609 |||||||| || ||| ||| ||| | | ||| | |||| | | | Sbjct 20302 GCTGGAGAACCTGGGTAACTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAAGAT 20243 Query 47610 TCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCTTCTGA 47668 || | ||| || || || |||||||| |||| ||||||| |||| || |||||| Sbjct 20242 TCAACAGCAGCATGGTAAATGGTTTCAAAGATTTGAATGTTTA-ATTCTCTAGCTTCTTG 20184 Query 47669 TGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACC 47728 || ||||| || | || | ||| || || ||||||||||| | | | Sbjct 20183 AGAATCAAATGGCAATCTCAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGC 20124 Query 47729 AATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATC 47788 ||||||||| || | ||||||| ||||||||||| | ||| || | ||| ||| Sbjct 20123 AATTGGTCTGTGTCTCATATTAGATCTTTCAGCTTCTGGAACTGGGTAGTAGTTACGATC 20064 Query 47789 TATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATC 47848 |||| | | || | || ||| ||||| | ||| | Sbjct 20063 GATAACTCTGTTCAAGTTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTT 20004 Query 47849 AAAC------TTGTTATTTAT-------AACAAACCTATTAAGTGCTATAGATGCTAGAT 47895 | || ||| | || || |||||| | ||| || || || | | Sbjct 20003 ATACCAAGTATTGCT-TTCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGT 19945 Query 47896 TACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCAC 47955 |||| ||||| || |||| |||| || ||||| | |||||| ||| | || | Sbjct 19944 TACAAACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAG 19885 Query 47956 ATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015 ||||||| ||||||||| | || ||| | ||||||| || || || || | || Sbjct 19884 ATTTGATGACACCCAAATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACA 19825 Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAG-ATTCAATGATAGATTTCCAAACAGTCCTAGCC 48074 |||| || || |||||||| | || | | |||| ||||| | ||| | | | | | | Sbjct 19824 TAAATGGAGTACCAGTTTCGGTTTGGGCACTCAA-GATAGCGTACCATA-ATTTTTGGGC 19767 Query 48075 TTT-ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTC 48133 ||| || |||| | || || | ||||||| | |||||||| | |||||||| Sbjct 19766 TTTGATGGTTTGTCTACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTC 19707 Query 48134 ATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTC 48193 ||| || || |||| || || ||| |||||| ||| | | ||| | ||| || | Sbjct 19706 ATCACCGTAGACATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACC 19647 Query 48194 ATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCT 48253 | | || ||||| |||| || | |||||| ||||| | |||| || || || || Sbjct 19646 GTTTTGTTCAACTCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCT 19587 Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313 | ||| | |||||| || || ||| || ||| || | |||||| | |||||| Sbjct 19586 GGCTCTGATTTCTTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACT 19527 Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373 ||||||||||| || |||| || | ||||||||| || ||||| |||||||| | Sbjct 19526 GTGCCATGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAAC 19467 Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433 ||| | ||||| ||||| ||||||| | ||| || | |||||| || || ||||||| Sbjct 19466 ATAACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATT 19407 Query 48434 GGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCAC 48492 || || | ||| ||| ||| | | | || || || || || ||| ||||||| Sbjct 19406 AGTACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAA-ACCAATACCAC 19348 Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552 | || | || || |||| |||||| ||| | ||||| ||||| ||||| || || Sbjct 19347 CAGCACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAAT 19288 Query 48553 CATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAA 48612 |||| ||||| | | ||||| ||||||||| || || || | ||| | Sbjct 19287 CATCCTTCATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGA 19228 Query 48613 ATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAA 48672 | || ||| || | || | || || | | ||| | ||| ||||| |||||||||| Sbjct 19227 ACAAACATGGGGAACCGTGTGTGAAATATCTTTGTGACATCAAATTATAAGTTTCAATAA 19168 Query 48673 C----AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGA 48728 | |||| | | | || || ||||| |||| || | ||| | | || ||| Sbjct 19167 CTCTTGGAATATCTTTACC----GTGAATACCAATAGCAACTCTCATAATTAAATGTTGT 19112 Query 48729 GGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAA 48788 ||||||||| ||| ||| || || || | ||||||| |||||| ||||| ||| Sbjct 19111 GGTCTTTCAGCAACTTTACCGTTGATACGTAACAAATATGATCTTTCCATGGTTTTGAAA 19052 Query 48789 CCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCT 48846 ||||| |||||||| ||||| || | || | || ||| | ||| || | | || | Sbjct 19051 CCAAAGTAGTTGTAATTGAAA--TCTCTGTCGTAAACAATAGCTGAGTTCAATTCATCTT 18994 Query 48847 TATGTT-TAT-ATACTA-CATCCATTACATTTTTTGATAT--------AATTGATTCC-- 48893 ||||| || ||| || ||| || | ||| || || ||| | || Sbjct 18993 CATGTTCCATGATAATATCATAAGTT---TCTTTAGAAATCATAGGAGAATGTAAACCAG 18937 Query 48894 TT-----GTAAAGATCTTC---TACAACAT----CACT---AAATAtttttt--ttGTTT 48936 || || | || ||| || | | | ||| | |||| ||| | |||| Sbjct 18936 TTTTTGGGTTGACATATTCGTATAAAGCTTGAGAAACTTTGGAGTATTGTTTGGTAGTTT 18877 Query 48937 CTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTG 48996 |||||| | ||| || | || ||||| || ||||| | ||| ||||||||||| | | Sbjct 18876 GTTTATGTAAATTGGAGACAGCGATTCTGGCTGCTAAAACAGCGTAATCTGGATGCACGG 18817 Query 48997 TTGTACAT-GTACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCT 49055 | || ||| ||| || ||||| || ||||| |||||||||| ||||||| |||||| Sbjct 18816 TAGT-CATAGTAGCAGCAATTTCAGCAGCTAAGTTATCTAATTCAATAGTAGTAACACCT 18758 Query 49056 GTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATCCATATCC 49115 || | || ||| ||||| | || || || || | |||| ||| Sbjct 18757 TGGTAAACACCAGAAATGACTTTTTGGGTAATGGCGACCGGTTCGACGTGATTTGGATCT 18698 Query 49116 AGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTA 49175 | || ||||||||| ||| | ||| | |||||||||||||| | ||||||| Sbjct 18697 AAACCGTAACATAATCTTTGCACTCTGGCAGTAATTTTATCAAAACGGACTGGCTCTTTA 18638 Query 49176 CGACCGTCACGTTTTATAACAAACATCTT 49204 || || || | ||| | ||| |||| || Sbjct 18637 CGGCCATCTCTTTTAAAGACATACATGTT 18609 >seq124 Length=102737 Score = 255 bits (282), Expect = 7e-63 Identities = 602/885 (68%), Gaps = 37/885 (4%) Strand=Plus/Plus Query 18671 TTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATT 18730 |||| || || | ||||| |||||||||||||| ||||| || | || |||||| || Sbjct 21089 TTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTT 21148 Query 18731 CCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAAT-CCTAATTCTAATAGT 18789 |||| |||||||||||||| | || ||||| || || | | | || || | | | Sbjct 21149 CCATGAAATCAAATGGATTAGTCACGTTATA-ATACTTATCATTACCAAAAGCAACCAAC 21207 Query 18790 AGTCTATCCGCTACAA-ATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 | |||||| || |||| ||| | |||| ||||| |||||||||||| || | || Sbjct 21208 AATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAA 21266 Query 18849 TTTAACAGGTAGTGCATCTGT-AAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAA 18907 ||| || || ||||| | ||| | ||||| ||| ||| | || || || | |||| Sbjct 21267 AGAAACTGGAAGCGCATCACTGAAGTACTTCTT-TTCAATACTAACAGCTTCAGTGATAA 21325 Query 18908 TAGATACAACTCTATCTTCATTAGGAG--GG--TATAGAAGATGTTTAAACATC--AAAC 18961 | | ||||| | |||| || ||| | || | || || |||| Sbjct 21326 TCTTT-----TCTATAATGGA-AGGATCCGGCTTATTCTCCAAGTATGAAAATAGTAAAC 21379 Query 18962 ATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAAC 19021 | ||| |||| || | || ||||| |||| ||||||||||| || || ||||||| Sbjct 21380 AAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAAC 21439 Query 19022 CAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATA 19081 | ||||||| ||||||||||| ||||| || || ||||| ||||| ||| ||||| | Sbjct 21440 CTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAAA 21499 Query 19082 TACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGA 19140 | ||||| | || ||||| || || | ||||||| || ||| | || || | | ||| Sbjct 21500 TGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCA-AACAAGGCTTCTTCGTCTTGA 21558 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATG----GCATTGTCTCTATAGA 19196 |||||| | | ||||||| || |||||| || ||| || | || || | Sbjct 21559 ATCCATCTAATAGCCCAAT----CTGCTTTTTCACCAATGTATTTAATATTGTCAATGGC 21614 Query 19197 ATTAAATAGATACATACG-CTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGT 19255 || || | | | || | ||| | | ||| || | || | || || || | | Sbjct 21615 GTTGAACA-AGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTAAAAGGGAAT 21673 Query 19256 ACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTT-GCTTCT 19314 | |||||||||| |||||||| || ||||| ||| || ||| || ||| ||||| Sbjct 21674 ATGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCA 21732 Query 19315 GTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTA 19374 | | | |||||| ||||||| |||| ||||| |||||||| ||||| ||||| Sbjct 21733 GGAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGAT 21792 Query 19375 GCTGCAAAAAATGCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAATGTATT 19433 || |||||||| ||||| || | || | || ||| | |||||||| | | | |||| Sbjct 21793 GCAGCAAAAAAGGCTAAAAC-TCTTGAGATGAAAAATCTTTCATCTTTATTCATTTTATT 21851 Query 19434 ---CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC 19490 |||||||| || ||||||| || || | |||||| |||||||||| || || | Sbjct 21852 TTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAAC 21911 Query 19491 TGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAA 19535 | ||| || || | |||| || ||| |||||| ||| ||||| Sbjct 21912 AGATTTCTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAAA 21956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106221325880