Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq307 266 4e-66 seq250 260 2e-64 seq124 161 1e-34 >seq307 Length=48190 Score = 266 bits (294), Expect = 4e-66 Identities = 605/901 (67%), Gaps = 27/901 (3%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||| || || ||||| |||||||||| || || || || | Sbjct 40009 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 39950 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA-----TAGTACTA 36986 | || ||||||||||| ||||| ||||| |||| ||| || | | || Sbjct 39949 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 39890 Query 36987 CATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCA 37046 || | || | | | ||||| |||||| |||| | |||| |||||| | ||| Sbjct 39889 CAAGGCAAATAAT-----AATCTATCAGCAACATATTCAACATATTGACACATCAAGTCA 39835 Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTAT 37105 |||| ||||| | || ||||||| ||||| |||| | || |||||| | || Sbjct 39834 CAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAA-ATATTCTTTTTCAAC-AT 39777 Query 37106 TACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATA 37162 || || ||| ||| ||| || ||| || |||| || ||| | || || | Sbjct 39776 --CAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 39719 Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||| Sbjct 39718 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 39659 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 || || || || |||||||| |||||||| ||||| | ||| || || | ||||| || Sbjct 39658 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 39599 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT---GTACCGAAAGT 37339 ||| |||||||||||||||| || ||||| || || | | | | | |||| Sbjct 39598 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAG- 39540 Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399 | || | ||| ||||||||| | | ||| || || || ||| |||| ||| Sbjct 39539 -CATCT-TTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 39482 Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459 ||||||| || || || | || | ||||| ||| | | |||||| ||||| Sbjct 39481 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 39422 Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519 || |||| |||||||||||| ||||| ||||| || || || |||||||| || | Sbjct 39421 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 39362 Query 37520 CCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTAT 37579 ||||||| | | ||| || ||| | |||| | | | ||||||||| ||| || Sbjct 39361 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 39302 Query 37580 CCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATT 37636 |||||| ||| || || || || | ||| | ||||| | ||||| ||||| Sbjct 39301 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 39242 Query 37637 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 | || || |||||||||| | |||||| |||||||||||| ||| ||||| || Sbjct 39241 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 39182 Query 37697 ACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTAC 37756 || || |||||| | |||| || |||| || || |||||||| || || Sbjct 39181 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 39122 Query 37757 A 37757 | Sbjct 39121 A 39121 >seq250 Length=32566 Score = 260 bits (288), Expect = 2e-64 Identities = 604/901 (67%), Gaps = 27/901 (3%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||| || || ||||| |||||||||| || || || || | Sbjct 29495 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 29436 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA-----TAGTACTA 36986 | || ||||||||||| ||||| ||||| |||| ||| || | | || Sbjct 29435 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 29376 Query 36987 CATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCA 37046 || | || | | | ||||| |||||| |||| | |||| |||||| | ||| Sbjct 29375 CAAGGCAAATAAT-----AATCTATCAGCAACATATTCAACATATTGACACATCAAGTCA 29321 Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTAT 37105 |||| ||||| | || ||||||| ||||| |||| | || |||||| | || Sbjct 29320 CAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAA-ATATTCTTTTTCAAC-AT 29263 Query 37106 TACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATA 37162 || || ||| ||| ||| || ||| || |||| || ||| | || || | Sbjct 29262 --CAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 29205 Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||| Sbjct 29204 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 29145 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 || || || || |||||||| |||||||| ||||| | ||| || || | ||||| || Sbjct 29144 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 29085 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT---GTACCGAAAGT 37339 ||| |||||||||||||||| || ||||| || || | | | | | |||| Sbjct 29084 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAG- 29026 Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399 | || | ||| ||||||||| | | ||| || || || ||| |||| ||| Sbjct 29025 -CATCT-TTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 28968 Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459 ||||||| || || || | || | ||||| ||| | | |||||| ||||| Sbjct 28967 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 28908 Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519 || |||| |||||||||||| ||||| ||||| || || || |||||||| || | Sbjct 28907 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 28848 Query 37520 CCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTAT 37579 ||||||| | | ||| || || | |||| | | | ||||||||| ||| || Sbjct 28847 TTTAGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 28788 Query 37580 CCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATT 37636 |||||| ||| || || || || | ||| | ||||| | ||||| ||||| Sbjct 28787 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 28728 Query 37637 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 | || || |||||||||| | |||||| |||||||||||| ||| ||||| || Sbjct 28727 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 28668 Query 37697 ACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTAC 37756 || || |||||| | |||| || |||| || || |||||||| || || Sbjct 28667 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 28608 Query 37757 A 37757 | Sbjct 28607 A 28607 >seq124 Length=102737 Score = 161 bits (178), Expect = 1e-34 Identities = 557/855 (65%), Gaps = 19/855 (2%) Strand=Plus/Plus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 |||| || ||||| || || || | | |||||||||||||| |||||||||||||||| Sbjct 21110 TTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAATGGATTAG 21169 Query 36967 ATGTATTATATATAGTACTACATGAT--AATTCCTTCAGAAGCCTATCCGCAACAAATTC 37024 ||||| ||| | | ||| | || | || | ||||| ||| | |||| Sbjct 21170 TCACGTTATA-ATACTTAT-CATTACCAAAAGCAACCAACAATCTATCGGCACAATATTC 21227 Query 37025 TATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-T 37083 | |||| |||||| | ||| | || ||||| | | ||||||| ||||| | Sbjct 21228 CACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCATCACT 21287 Query 37084 GAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACAATAACTTCTTCAG 37143 |||| | | |||| | || | ||||| || | | || || | |||| | | Sbjct 21288 GAAGTACTTCTTTT-CAATACTAACAGCTTCAGTGATAATCTTTTCTATAA--TGGAAGG 21344 Query 37144 TTGGGGGATATTTT--AAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTC 37201 | || |||| | || ||| ||| | |||||| ||| |||| || | |||||| Sbjct 21345 ATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTC 21404 Query 37202 ATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAAT 37261 || |||| ||||||||||| || || ||||| |||||||| || ||||||||||| | Sbjct 21405 GTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAA 21464 Query 37262 CCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321 |||||| || | || || || ||| |||||||| ||||||| || |||||||| || Sbjct 21465 CCAAAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCAC 21524 Query 37322 AAGAC---GTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGC 37378 | | || | || | | || | || ||||||| | | | ||||||||| Sbjct 21525 CAATCTTTCTGCAAACAAGGCT--TCT-TCGTCTTGAATCCATCTAATAGCCCAATCTGC 21581 Query 37379 CTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACT 37438 ||| || ||| ||| | ||||| || || || | || | || | | Sbjct 21582 TTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGG 21641 Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 ||| | | || || ||||||| | ||| |||| || || |||||||| || Sbjct 21642 ATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGATATTTTCCATCAT 21701 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 ||||| || |||| | | ||||||| | || ||| || || |||| | | Sbjct 21702 GATCTGGAATTTGTAAACCAGCTTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTTC 21761 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | | ||||||||||| ||||| ||||| || ||||| || || | ||| | || Sbjct 21762 AACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGAT 21821 Query 37619 AAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 37675 ||| ||||||||| | || || | |||| |||||||| || |||||| || || Sbjct 21822 GAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAATCATCAAAATCTTTACTCAAGTC 21881 Query 37676 AACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATT 37735 || ||| || | |||||||| ||| | | || || | |||||||| ||| Sbjct 21882 AATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAGG 21941 Query 37736 ATGTTGTATTGGAAA 37750 || || ||||||||| Sbjct 21942 ATATTTTATTGGAAA 21956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314082746680