Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq307 266 4e-66
seq250 260 2e-64
seq124 161 1e-34
>seq307
Length=48190
Score = 266 bits (294), Expect = 4e-66
Identities = 605/901 (67%), Gaps = 27/901 (3%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || |||||| || || ||||| |||||||||| || || || || |
Sbjct 40009 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 39950
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA-----TAGTACTA 36986
| || ||||||||||| ||||| ||||| |||| ||| || | | ||
Sbjct 39949 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 39890
Query 36987 CATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCA 37046
|| | || | | | ||||| |||||| |||| | |||| |||||| | |||
Sbjct 39889 CAAGGCAAATAAT-----AATCTATCAGCAACATATTCAACATATTGACACATCAAGTCA 39835
Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTAT 37105
|||| ||||| | || ||||||| ||||| |||| | || |||||| | ||
Sbjct 39834 CAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAA-ATATTCTTTTTCAAC-AT 39777
Query 37106 TACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATA 37162
|| || ||| ||| ||| || ||| || |||| || ||| | || || |
Sbjct 39776 --CAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 39719
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct 39718 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 39659
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282
|| || || || |||||||| |||||||| ||||| | ||| || || | ||||| ||
Sbjct 39658 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 39599
Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT---GTACCGAAAGT 37339
||| |||||||||||||||| || ||||| || || | | | | | ||||
Sbjct 39598 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAG- 39540
Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399
| || | ||| ||||||||| | | ||| || || || ||| |||| |||
Sbjct 39539 -CATCT-TTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 39482
Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459
||||||| || || || | || | ||||| ||| | | |||||| |||||
Sbjct 39481 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 39422
Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519
|| |||| |||||||||||| ||||| ||||| || || || |||||||| || |
Sbjct 39421 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 39362
Query 37520 CCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTAT 37579
||||||| | | ||| || ||| | |||| | | | ||||||||| ||| ||
Sbjct 39361 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 39302
Query 37580 CCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATT 37636
|||||| ||| || || || || | ||| | ||||| | ||||| |||||
Sbjct 39301 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 39242
Query 37637 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
| || || |||||||||| | |||||| |||||||||||| ||| ||||| ||
Sbjct 39241 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 39182
Query 37697 ACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTAC 37756
|| || |||||| | |||| || |||| || || |||||||| || ||
Sbjct 39181 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 39122
Query 37757 A 37757
|
Sbjct 39121 A 39121
>seq250
Length=32566
Score = 260 bits (288), Expect = 2e-64
Identities = 604/901 (67%), Gaps = 27/901 (3%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || |||||| || || ||||| |||||||||| || || || || |
Sbjct 29495 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 29436
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA-----TAGTACTA 36986
| || ||||||||||| ||||| ||||| |||| ||| || | | ||
Sbjct 29435 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 29376
Query 36987 CATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCA 37046
|| | || | | | ||||| |||||| |||| | |||| |||||| | |||
Sbjct 29375 CAAGGCAAATAAT-----AATCTATCAGCAACATATTCAACATATTGACACATCAAGTCA 29321
Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTAT 37105
|||| ||||| | || ||||||| ||||| |||| | || |||||| | ||
Sbjct 29320 CAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAA-ATATTCTTTTTCAAC-AT 29263
Query 37106 TACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATA 37162
|| || ||| ||| ||| || ||| || |||| || ||| | || || |
Sbjct 29262 --CAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 29205
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct 29204 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 29145
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282
|| || || || |||||||| |||||||| ||||| | ||| || || | ||||| ||
Sbjct 29144 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 29085
Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT---GTACCGAAAGT 37339
||| |||||||||||||||| || ||||| || || | | | | | ||||
Sbjct 29084 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAG- 29026
Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399
| || | ||| ||||||||| | | ||| || || || ||| |||| |||
Sbjct 29025 -CATCT-TTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 28968
Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459
||||||| || || || | || | ||||| ||| | | |||||| |||||
Sbjct 28967 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 28908
Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519
|| |||| |||||||||||| ||||| ||||| || || || |||||||| || |
Sbjct 28907 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 28848
Query 37520 CCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTAT 37579
||||||| | | ||| || || | |||| | | | ||||||||| ||| ||
Sbjct 28847 TTTAGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 28788
Query 37580 CCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATT 37636
|||||| ||| || || || || | ||| | ||||| | ||||| |||||
Sbjct 28787 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 28728
Query 37637 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
| || || |||||||||| | |||||| |||||||||||| ||| ||||| ||
Sbjct 28727 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 28668
Query 37697 ACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTAC 37756
|| || |||||| | |||| || |||| || || |||||||| || ||
Sbjct 28667 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 28608
Query 37757 A 37757
|
Sbjct 28607 A 28607
>seq124
Length=102737
Score = 161 bits (178), Expect = 1e-34
Identities = 557/855 (65%), Gaps = 19/855 (2%)
Strand=Plus/Plus
Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966
|||| || ||||| || || || | | |||||||||||||| ||||||||||||||||
Sbjct 21110 TTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAATGGATTAG 21169
Query 36967 ATGTATTATATATAGTACTACATGAT--AATTCCTTCAGAAGCCTATCCGCAACAAATTC 37024
||||| ||| | | ||| | || | || | ||||| ||| | ||||
Sbjct 21170 TCACGTTATA-ATACTTAT-CATTACCAAAAGCAACCAACAATCTATCGGCACAATATTC 21227
Query 37025 TATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-T 37083
| |||| |||||| | ||| | || ||||| | | ||||||| ||||| |
Sbjct 21228 CACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCATCACT 21287
Query 37084 GAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACAATAACTTCTTCAG 37143
|||| | | |||| | || | ||||| || | | || || | |||| | |
Sbjct 21288 GAAGTACTTCTTTT-CAATACTAACAGCTTCAGTGATAATCTTTTCTATAA--TGGAAGG 21344
Query 37144 TTGGGGGATATTTT--AAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTC 37201
| || |||| | || ||| ||| | |||||| ||| |||| || | ||||||
Sbjct 21345 ATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTC 21404
Query 37202 ATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAAT 37261
|| |||| ||||||||||| || || ||||| |||||||| || ||||||||||| |
Sbjct 21405 GTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAA 21464
Query 37262 CCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321
|||||| || | || || || ||| |||||||| ||||||| || |||||||| ||
Sbjct 21465 CCAAAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCAC 21524
Query 37322 AAGAC---GTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGC 37378
| | || | || | | || | || ||||||| | | | |||||||||
Sbjct 21525 CAATCTTTCTGCAAACAAGGCT--TCT-TCGTCTTGAATCCATCTAATAGCCCAATCTGC 21581
Query 37379 CTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACT 37438
||| || ||| ||| | ||||| || || || | || | || | |
Sbjct 21582 TTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGG 21641
Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498
||| | | || || ||||||| | ||| |||| || || |||||||| ||
Sbjct 21642 ATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGATATTTTCCATCAT 21701
Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558
||||| || |||| | | ||||||| | || ||| || || |||| | |
Sbjct 21702 GATCTGGAATTTGTAAACCAGCTTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTTC 21761
Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618
| | ||||||||||| ||||| ||||| || ||||| || || | ||| | ||
Sbjct 21762 AACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGAT 21821
Query 37619 AAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 37675
||| ||||||||| | || || | |||| |||||||| || |||||| || ||
Sbjct 21822 GAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAATCATCAAAATCTTTACTCAAGTC 21881
Query 37676 AACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATT 37735
|| ||| || | |||||||| ||| | | || || | |||||||| |||
Sbjct 21882 AATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAGG 21941
Query 37736 ATGTTGTATTGGAAA 37750
|| || |||||||||
Sbjct 21942 ATATTTTATTGGAAA 21956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592314082746680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |