Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq325 201 6e-47 seq51 201 6e-47 >seq325 Length=13538 Score = 201 bits (222), Expect = 6e-47 Identities = 303/426 (71%), Gaps = 6/426 (1%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| ||| ||| ||| | ||||| |||||| ||| ||| || |||||||| Sbjct 11404 ATTTGGAGAGAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCTGG 11345 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||||| || || || ||||| ||||| ||||||||||| ||||| |||||| | Sbjct 11344 GATCCACAAAGCTGGGAACAAGTCTCTGGCTCTGATTTCTTCTTTACCGTGGTTCTTTCT 11285 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | || ||||| ||||| |||||||||||| || || | ||||||| ||| Sbjct 11284 AATATCGATAAAGTCAAAGATATCACTGTGCCATGGTTCCAAGTATAAAGCAAAAGCACC 11225 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||||||||| || || | ||||| | ||||||||| | | ||| Sbjct 11224 TGGTCTCTTGTTACCACCTTGATCAACATAACGAGCAGTGTTGTTGAAAACTCTGACCAT 11165 Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 |||| |||| | |||| || | || || || | | ||| | | || || || | || Sbjct 11164 AGGAA-TAATACCGTTGGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGAA 11106 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA--ATCTGA 26244 | | ||| || | ||| || |||||||| | || ||||| ||||| || | | Sbjct 11105 TGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCACATGATTTCA 11046 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || |||||| |||| |||| ||| |||| | ||||| | | || ||||| ||||| Sbjct 11045 AA--GTATCGTAAATACCTTCAATGGAATCATCCTTCATAGCAAGCAAGAAACATGAAGA 10988 Query 26305 TAATTG 26310 | ||| Sbjct 10987 CATTTG 10982 Score = 132 bits (146), Expect = 2e-26 Identities = 346/519 (67%), Gaps = 8/519 (2%) Strand=Plus/Minus Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724 |||||||| |||| | || | || |||||| | || ||||| ||||| ||||| Sbjct 12603 GTAAATTGAATAGCGGCAGAAGCAGCTTGAGTTCTCAAGTAGTACATACCAGTCTTCAAA 12544 Query 24725 TTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGCTGAT-TCTAA 24783 |||||||||||| || |||||||| ||| | ||| | || ||| ||| | ||| Sbjct 12543 CCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTACCCATAGTTG--GATCTTTAA 12486 Query 24784 AAACAAG-TTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAA 24842 || |||| ||||||| ||| || ||| |||||| ||||| | |||| Sbjct 12485 TGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAA 12426 Query 24843 TGATC-GTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGA 24901 |||| ||||| | || || || || | || ||||| | || || ||| ||| Sbjct 12425 TGATATGTTTTTGT-GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGG 12367 Query 24902 ATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCT-CATATTCGG 24960 || ||| | | ||| | || ||||| | | |||| | | ||| |||| Sbjct 12366 ATGTTTGGCAAACCTTGGATCGAACCATTGT-TGGAAATAATGTTACTCTTCATAGCATC 12308 Query 24961 TGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTC 25020 |||||| | | | | | ||| | | ||||| | ||| | || ||||| Sbjct 12307 ATTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTC 12248 Query 25021 TCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATT 25080 |||| |||||||||||| | | ||| |||||| | ||||| ||||||||||| || Sbjct 12247 ACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTT 12188 Query 25081 TCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAA 25140 || |||||||| |||||||| || ||||||||| || | || | || |||||||| Sbjct 12187 ACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAA 12128 Query 25141 ACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 ||||| ||| | |||| |||||| || |||||||||| Sbjct 12127 ACCATGTTTGGCCATCTTTTGTTTCAAAGTATCCCAATC 12089 >seq51 Length=22326 Score = 201 bits (222), Expect = 6e-47 Identities = 303/426 (71%), Gaps = 6/426 (1%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| ||| ||| ||| | ||||| |||||| ||| ||| || |||||||| Sbjct 19673 ATTTGGAGAGAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCTGG 19614 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||||| || || || ||||| ||||| ||||||||||| ||||| |||||| | Sbjct 19613 GATCCACAAAGCTGGGAACAAGTCTCTGGCTCTGATTTCTTCTTTACCGTGGTTCTTTCT 19554 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | || ||||| ||||| |||||||||||| || || | ||||||| ||| Sbjct 19553 AATATCGATAAAGTCAAAGATATCACTGTGCCATGGTTCCAAGTATAAAGCAAAAGCACC 19494 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||||||||| || || | ||||| | ||||||||| | | ||| Sbjct 19493 TGGTCTCTTGTTACCACCTTGATCAACATAACGAGCAGTGTTGTTGAAAACTCTGACCAT 19434 Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 |||| |||| | |||| || | || || || | | ||| | | || || || | || Sbjct 19433 AGGAA-TAATACCGTTGGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGAA 19375 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA--ATCTGA 26244 | | ||| || | ||| || |||||||| | || ||||| ||||| || | | Sbjct 19374 TGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCACATGATTTCA 19315 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || |||||| |||| |||| ||| |||| | ||||| | | || ||||| ||||| Sbjct 19314 AA--GTATCGTAAATACCTTCAATGGAATCATCCTTCATAGCAAGCAAGAAACATGAAGA 19257 Query 26305 TAATTG 26310 | ||| Sbjct 19256 CATTTG 19251 Score = 132 bits (146), Expect = 2e-26 Identities = 346/519 (67%), Gaps = 8/519 (2%) Strand=Plus/Minus Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724 |||||||| |||| | || | || |||||| | || ||||| ||||| ||||| Sbjct 20872 GTAAATTGAATAGCGGCAGAAGCAGCTTGAGTTCTCAAGTAGTACATACCAGTCTTCAAA 20813 Query 24725 TTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGCTGAT-TCTAA 24783 |||||||||||| || |||||||| ||| | ||| | || ||| ||| | ||| Sbjct 20812 CCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTACCCATAGTTG--GATCTTTAA 20755 Query 24784 AAACAAG-TTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAA 24842 || |||| ||||||| ||| || ||| |||||| ||||| | |||| Sbjct 20754 TGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAA 20695 Query 24843 TGATC-GTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGA 24901 |||| ||||| | || || || || | || ||||| | || || ||| ||| Sbjct 20694 TGATATGTTTTTGT-GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGG 20636 Query 24902 ATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCT-CATATTCGG 24960 || ||| | | ||| | || ||||| | | |||| | | ||| |||| Sbjct 20635 ATGTTTGGCAAACCTTGGATCGAACCATTGT-TGGAAATAATGTTACTCTTCATAGCATC 20577 Query 24961 TGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTC 25020 |||||| | | | | | ||| | | ||||| | ||| | || ||||| Sbjct 20576 ATTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTC 20517 Query 25021 TCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATT 25080 |||| |||||||||||| | | ||| |||||| | ||||| ||||||||||| || Sbjct 20516 ACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTT 20457 Query 25081 TCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAA 25140 || |||||||| |||||||| || ||||||||| || | || | || |||||||| Sbjct 20456 ACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAA 20397 Query 25141 ACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 ||||| ||| | |||| |||||| || |||||||||| Sbjct 20396 ACCATGTTTGGCCATCTTTTGTTTCAAAGTATCCCAATC 20358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038868199525