Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq181 143 3e-29
>seq181
Length=15068
Score = 143 bits (158), Expect = 3e-29
Identities = 196/274 (72%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 139268 TGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCA 139327
|| ||||||||| | ||||| |||| || || || | || ||||||||| || ||
Sbjct 3430 TGGACCATGATAGACAGCATAATTAGCAGAAATGTTAGCCAACAATGCTTGTGCAGTACA 3489
Query 139328 GATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCT 139387
||| ||| || ||||| |||||| ||||||| || ||||||||||||| ||||| |
Sbjct 3490 GATATTAGAAGTAGCTTTTTCTCTTTTAATATGTTGTTCTCTAGTTTGTAAAGCTAAACG 3549
Query 139388 GTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCT 139447
| || || |||||| || || || ||| |||||||| || || || |||||
Sbjct 3550 TAAAGCTGGTTTGCCTAATCTATCTTTAGAAATACCAACAATTCTTCCTGGGATTTTTCT 3609
Query 139448 CTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAAT 139507
||| || || ||||| || ||||||||||| ||||| || || || | ||||
Sbjct 3610 TGCATATTTAGATGAAGTTGCGAAAAATGCAGCATGTGGACCACCATAACCAAATGGAAC 3669
Query 139508 ACCAAACCTTTGCATACTACCTACAGCAATATCA 139541
|||||| ||||| | |||| | |||||||||
Sbjct 3670 ACCAAATCTTTGAGAAGTACCCAATGCAATATCA 3703
Score = 136 bits (150), Expect = 5e-27
Identities = 517/792 (65%), Gaps = 31/792 (4%)
Strand=Plus/Plus
Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221
|||||| | | ||||| | |||| || || || || ||||| ||||| |||||
Sbjct 2306 AATGGTTTTAAATGTTCTTTAACACAAACTGGTGCTTGACCTGGACCACCACCACCATGA 2365
Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281
| | || || ||||| | ||| | |||||| ||||| ||||| | |||| |||
Sbjct 2366 CTCAAAGCAAAAGTTTTATGAATATTCAAATGACAAACATCAGCACCTAAATCACCTGGA 2425
Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341
| || ||| || || ||||| | ||| |||||||| ||||| || ||||||||
Sbjct 2426 GAAGTTAAACCAACTTGAGCATTCATATTGGCACCATCAAGATAAACTAAACCACCATGT 2485
Query 138342 TCATGAACGATCTTACATATCTGTCT-GATGTTTGTTTCAAATACACCATGAGTCGATGG 138400
|||||||| || | | ||| || ||| || || |||||||| ||||| ||| |||||
Sbjct 2486 TCATGAACAATATCA-ATAGCTCTCTTGACACCTGGTTCAAATAAACCATAAGTAGATGG 2544
Query 138401 ATATGTAATCATAATACATGA-GAGTT--CA-AATGTATTCATGATTGCTTTCTTCTCTA 138456
||| |||||||||||| | | |||| || |||| || | | ||||| | ||
Sbjct 2545 ATAAGTAATCATAATAGAACACAAGTTAGCAGCATGTTTT--TCA--GCTTTAGCTTGTA 2600
Query 138457 GATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTG 138516
||||| | || || |||| | ||| || || |||||||||| || |
Sbjct 2601 AATCTTCTAAATCAATAGAACCATTAGACAAACATTTAACTGGAACAACTTTCAAACCAG 2660
Query 138517 CCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACT--CTGGTATCAGACATACATT 138574
||| | ||| ||| |||||||| ||||| || ||| |||| |||| ||| | |||
Sbjct 2661 ACATAGCAGCAGAAGCTGGATTAGTACCATGAGC--ACTAACTGGAATCAAACAAATATT 2718
Query 138575 TCTTTTATCA---TCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATA 138631
||||| ||| || || || ||||||| || ||| | | | || | |||
Sbjct 2719 TCTTTGTTCATATTCACCACGAGATTTATGATATTCTCTAATTAATGATAAACCAGTATA 2778
Query 138632 CTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691
||||| || | || | || || | | ||| ||||||||| || ||||||
Sbjct 2779 TTCACCTTGAGCACCAGAATTTGGCATAGAAGTAGTAGCATCAAAACCAGTAATATCATT 2838
Query 138692 TAACCATTTCTGTAAGTCATCTATTATCTTTTGATAACCCATGGTCTGTATC-ATAGGTG 138750
|| ||| | || ||| | |||| | || |||| || || || ||| || || |
Sbjct 2839 CAAATCTTTTTCAAATTCACCAATTAATTCTTTATAA-CCTTGAGCTTGATCAATTGGAG 2897
Query 138751 TATGTGGATGCA---CGTTGGCAAATTCTTCCCAT-GACACAGGCATCAGTTCTGCTGCT 138806
| |||||| | ||| ||| | | ||| || | || || ||| | |
Sbjct 2898 CAAATGGATGAATAGAATTG--AAA--CCTGGCATGGATAAAGTTTGCATTTCAACAGTA 2953
Query 138807 GCATTTAGTTTCATTGTGCAACTACCAAGTGGAACCATACCATTTACTAATGAGAAATC- 138865
||||| | |||||| || || ||| | ||||| ||||| || |||| || |||||
Sbjct 2954 GCATTCAATTTCATAGTACAGGAACCTAATGGAATCATACTATCAGCTAAAGATAAATCC 3013
Query 138866 -TTTAGAGCATAACTCATAGATATATCTCATCATGTCAGTTTCACTGTGATACTTATTGA 138924
||| | ||| || | |||||||| |||| |||||||| |||| | ||||
Sbjct 3014 ATTTTTTG--TAAAGAATGTAAATATCTCAACATGGCAGTTTCAGAATGATGAGTGTTGA 3071
Query 138925 ATACTTCCTGAG 138936
| ||||| ||||
Sbjct 3072 AAACTTCATGAG 3083
Score = 89.7 bits (98), Expect = 6e-13
Identities = 178/261 (68%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| || || | || || || |||||||||||| ||| || || || || || ||
Sbjct 4036 CATGGCTTCCCCAGCAGCGGTACCTTCATCTAATAAAGAAGCATTAGCCATGTCCAAACC 4095
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|||||| || || | |||||||| || || || | | ||||| || ||||| ||
Sbjct 4096 TGTAAGGGAAGTAATTAAAGTTTGGTAGTTCAACAAGGAATTTAATCTACCTTGAGAAAT 4155
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| | |||||| || |||||||| || ||||| ||| ||||||| |||| ||
Sbjct 4156 TTCTGGTTGATATGGTGTGTAAGAAGTATACCATTCTGGAGATTCAAGAAGATTTCTTTG 4215
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAAGACTAGGTTTTACTTT 140098
|| || || ||| |||||| || || |||| ||| || | | | ||||| |||
Sbjct 4216 AATAACAGGTGGTAAAATGGTACCGGCATAACCTTTACCAATGA-AGGATTTTTTATTTT 4274
Query 140099 GTTTGCTTTTGCTATATTTTT 140119
||| || |||| ||||||
Sbjct 4275 ATTTTTATTAGCTA-ATTTTT 4294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578995743844840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |