Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq307 298 8e-76
seq250 293 3e-74
seq124 185 1e-41
seq106 138 2e-27
seq297 134 2e-26
>seq307
Length=48190
Score = 298 bits (330), Expect = 8e-76
Identities = 605/887 (68%), Gaps = 28/887 (3%)
Strand=Plus/Minus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
|||||||| ||| || ||| | || ||||| || || || || || |||| || ||
Sbjct 40000 AGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGAAAT 39941
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT--AATTCG 17977
| ||| ||||| ||||| ||||| || ||| ||| ||||| || |
Sbjct 39940 ATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTT--CTTGTTACCCAAGGCA 39883
Query 17978 TATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCT 18037
||||||||||||| || ||| |||| |||||||| ||||||| || || ||||||||
Sbjct 39882 AATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACCC 39823
Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTT 18095
| || |||| || ||||||||| | | | ||||||| || | ||||||| ||
Sbjct 39822 AATAAA--GAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAA 39765
Query 18096 TTATTATGTTTATTACCCTAGATTTTGGCAATT-TATTAATT--ATGTGATTATAATATA 18152
|| || ||| || | || ||| || | | || | ||| | | |
Sbjct 39764 CAATAATCTTTTCAACAAT---TTCTGGAGATGGTCTGTGTTGCAAGTGGG---AGAACA 39711
Query 18153 ATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACG 18212
| ||||| ||||||||||| ||||||||||||||||| | || ||||| || || |
Sbjct 39710 ACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAG 39651
Query 18213 TTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAA 18272
| || || ||||| | |||||| ||||| | ||| || || || || || || | |
Sbjct 39650 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGA 39591
Query 18273 AGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCA---AAACTGTATTTA 18328
|||| ||||| |||| ||| || || || | |||||||||||| ||| | ||||
Sbjct 39590 AGAAAATACCTTCAATAGCA-GCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTA 39532
Query 18329 TTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCT 18388
| || | |||||||| |||||||| ||| ||||| || || | ||
Sbjct 39531 T--CTT-GAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCA 39475
Query 18389 ATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAA 18448
|| ||||||||||| ||| ||||| | ||||| | |||||| || ||||| |||
Sbjct 39474 ATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAA 39415
Query 18449 GAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCC 18508
||||||||||||||||| ||| ||||||| || || |||| ||| || ||| ||||
Sbjct 39414 GAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCT 39355
Query 18509 TCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568
|| || ||| | ||| | |||| |||| | ||| || ||| ||| ||||| |||
Sbjct 39354 TCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCA 39295
Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GA 18625
| || |||||||| || ||||| || |||| ||||||||| || || |
Sbjct 39294 GAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTG 39235
Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685
|||||||| ||||| | |||||| || |||||||||||| | ||||| || || | |
Sbjct 39234 TTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCT 39175
Query 18686 TCGGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732
||||| | ||| || | || | || || | || || || |||||
Sbjct 39174 TCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 39128
>seq250
Length=32566
Score = 293 bits (324), Expect = 3e-74
Identities = 604/887 (68%), Gaps = 28/887 (3%)
Strand=Plus/Minus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
|||||||| ||| || ||| | || ||||| || || || || || |||| || ||
Sbjct 29486 AGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGAAAT 29427
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT--AATTCG 17977
| ||| ||||| ||||| ||||| || ||| ||| ||||| || |
Sbjct 29426 ATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTT--CTTGTTACCCAAGGCA 29369
Query 17978 TATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCT 18037
||||||||||||| || ||| |||| |||||||| ||||||| || || ||||||||
Sbjct 29368 AATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACCC 29309
Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTT 18095
| || |||| || ||||||||| | | | ||||||| || | ||||||| ||
Sbjct 29308 AATAAA--GAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAA 29251
Query 18096 TTATTATGTTTATTACCCTAGATTTTGGCAATT-TATTAATT--ATGTGATTATAATATA 18152
|| || ||| || | || ||| || | | || | ||| | | |
Sbjct 29250 CAATAATCTTTTCAACAAT---TTCTGGAGATGGTCTGTGTTGCAAGTGGG---AGAACA 29197
Query 18153 ATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACG 18212
| ||||| ||||||||||| ||||||||||||||||| | || ||||| || || |
Sbjct 29196 ACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAG 29137
Query 18213 TTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAA 18272
| || || ||||| | |||||| ||||| | ||| || || || || || || | |
Sbjct 29136 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGA 29077
Query 18273 AGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCA---AAACTGTATTTA 18328
|||| ||||| |||| ||| || || || | |||||||||||| ||| | ||||
Sbjct 29076 AGAAAATACCTTCAATAGCA-GCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTA 29018
Query 18329 TTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCT 18388
| || | |||||||| |||||||| ||| ||||| || || | ||
Sbjct 29017 T--CTT-GAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCA 28961
Query 18389 ATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAA 18448
|| ||||||||||| ||| ||||| | ||||| | |||||| || ||||| |||
Sbjct 28960 ATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAA 28901
Query 18449 GAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCC 18508
||||||||||||||||| ||| ||||||| || || |||| ||| || ||| ||||
Sbjct 28900 GAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCT 28841
Query 18509 TCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568
|| || ||| | || | |||| |||| | ||| || ||| ||| ||||| |||
Sbjct 28840 TCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCA 28781
Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GA 18625
| || |||||||| || ||||| || |||| ||||||||| || || |
Sbjct 28780 GAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTG 28721
Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685
|||||||| ||||| | |||||| || |||||||||||| | ||||| || || | |
Sbjct 28720 TTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCT 28661
Query 18686 TCGGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732
||||| | ||| || | || | || || | || || || |||||
Sbjct 28660 TCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 28614
>seq124
Length=102737
Score = 185 bits (204), Expect = 1e-41
Identities = 552/840 (66%), Gaps = 32/840 (4%)
Strand=Plus/Plus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
|||| ||| ||| || ||| | || || |||||||| || || || |||| |||||
Sbjct 21084 AGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATAT 21143
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTA 17979
| ||| ||||||||||||||||| |||||||| || || | || |
Sbjct 21144 ATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCATTACCAAAAGCAAC 21203
Query 17980 TAATAATCTATCTGCTACAA-ATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038
|| |||||||| || |||| |||| |||||||| |||||||||| ||||||||||| |
Sbjct 21204 CAACAATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCATACCCA 21262
Query 18039 GTAGTCTGAAA--GGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCTT 18095
| |||| || || |||||| | || | |||||| || || ||||| ||
Sbjct 21263 --ACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTT-TCAATACTAACAGCTTCAG 21319
Query 18096 TTATTATGTT---TATTACCCTAGATTTTGGCAATTTATT----AATTATGTGATTATAA 18148
| || || || ||| | || | ||| ||||| || |||| ||
Sbjct 21320 TGATAATCTTTTCTATAATGGAAGGATCCGGC---TTATTCTCCAAGTATG-------AA 21369
Query 18149 TATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTA 18208
||| |||||| ||| |||| ||||| | |||||| || || | || ||||| ||
Sbjct 21370 AATAGTAAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAG 21429
Query 18209 AACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTA 18268
|| ||||| || ||||| | ||||||||||| | |||||| || || ||||| | |
Sbjct 21430 AAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCA 21489
Query 18269 GAAAAGAATATACCCTCAA-CGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTT 18327
||||| || || |||| ||| || || || | |||||||| ||||| | ||
Sbjct 21490 CTGAAGAAAATGCCTTCAATAGCA-GCAAATGCCACCAATCTTTCTGCAAACAAGGCTTC 21548
Query 18328 ATTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTC 18387
| | | |||||| | ||||| ||| ||| || | ||| | ||
Sbjct 21549 TTCGTCTTGAATCCATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTC 21608
Query 18388 TATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAA 18447
|| || || ||||| ||| || || | ||| || | || || || ||||| |
Sbjct 21609 AATGGCGTTGAACAAGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTAAAAG 21668
Query 18448 AGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGC 18507
||||| |||| ||||| || ||||||| ||||| || | |||| | | ||
Sbjct 21669 GGAATATGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGTAAACCAGCTTGGC 21728
Query 18508 CTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTC 18567
|| ||| || || || || |||| |||| ||||| || ||||| |||||||| ||
Sbjct 21729 TTCAGGAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATC 21788
Query 18568 AGCAGATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCA---TTATCCTTGA 18623
| | || ||||| || ||||| | || | |||||| | ||||| |||| | |
Sbjct 21789 TGATGCAGCAAAAAAGGCTAAAAC-TCTTGAGATGAAAAATCTTTCATCTTTATTCATTT 21847
Query 18624 GATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATG 18683
||| | ||| ||||| | |||||| | |||| |||||| | ||||||||| ||||
Sbjct 21848 TATTTTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATG 21907
>seq106
Length=24021
Score = 138 bits (152), Expect = 2e-27
Identities = 172/234 (74%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || ||||| ||||||||||| || |||||||||
Sbjct 4374 AAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCC 4315
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | ||| || || ||| |||||| ||||| |||||||| || || |||||
Sbjct 4314 TCCGACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGAT 4255
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| ||||| || | |||||| |||||||| || || ||
Sbjct 4254 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 4195
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || || ||||| ||||| ||||
Sbjct 4194 A--ACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTG 4143
>seq297
Length=71103
Score = 134 bits (148), Expect = 2e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | || || || ||||| |||||||| || || ||||| ||| |||
Sbjct 34568 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCTTC 34627
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | ||| ||||| ||| ||||| |||||||||||||| || || ||||| ||
Sbjct 34628 TGACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATCA 34687
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| || ||||| || | ||||| ||||| || || || || ||
Sbjct 34688 ACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACAA 34747
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || || || || ||||| ||||| |||
Sbjct 34748 CATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 34796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731868642537200
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