Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq307 262 8e-65
seq250 257 3e-63
seq124 181 2e-40
seq106 159 7e-34
seq297 149 1e-30
>seq307
Length=48190
Score = 262 bits (290), Expect = 8e-65
Identities = 539/804 (67%), Gaps = 14/804 (2%)
Strand=Plus/Minus
Query 49642 CATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATAC 49701
|| ||||||||||||| || ||| ||||||||||||| |||| || ||||| |||||||
Sbjct 39884 CAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATAC 39825
Query 49702 CCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtt 49761
||||||| || ||| | |||||| | | |||||||||| | || |||||||
Sbjct 39824 CCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAA 39765
Query 49762 taattatcataattatattattttttgataatttatatttaatatgattcgcatatatta 49821
||| ||| | || | |||| | || | | | | | | | | | | | |
Sbjct 39764 CAATAATCTT--TTCAACAATTTCTGGAGATGGTCTGTGTTGCAAG-TGGGAGAACAACA 39708
Query 49822 aACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 49881
|||| |||||||||||||||||||| || || ||| | || |||||||| ||||| |
Sbjct 39707 AACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCA 39648
Query 49882 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 49941
| |||||||| || ||||||||||| | ||| || || || ||||| || | ||||
Sbjct 39647 AACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGA 39588
Query 49942 ATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---AT 49998
| ||||| || | | ||||| || | | |||| | || | ||| ||| ||
Sbjct 39587 AAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATA---TAAAGCATCTTTAT 39531
Query 49999 CTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAG 50058
|| ||||| || || ||||| || ||||| || | ||| | || || ||||| || |
Sbjct 39530 CTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGG 39471
Query 50059 CTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAAT 50118
| ||||| || || ||| | |||||||||||||
Sbjct 39470 CATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAAT 39411
Query 50119 ACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTG 50178
||||||||||||| | |||||| ||||| || ||| ||| | | |||||||
Sbjct 39410 ACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTG 39351
Query 50179 AATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATG 50238
|| ||||||| | | || ||||| || || ||| |||||||||||||| |
Sbjct 39350 GCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAG 39291
Query 50239 CTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATT----T 50294
| ||||| || |||||||| || ||||| ||||||||| || ||||| || |
Sbjct 39290 CAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGT 39231
Query 50295 TCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACG 50354
||| | || ||| ||| || |||||| |||||||| ||||| || || ||| ||
Sbjct 39230 TCCAATCATCCAA-ATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCG 39172
Query 50355 GATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTA 50414
| ||||||||| | | | || ||| || || ||| ||||| | ||||| ||
Sbjct 39171 GCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATAACGACGT 39112
Query 50415 GTAtttttttCTAATATCGGTTCT 50438
| |||| || ||||| ||||||
Sbjct 39111 TTGTTTTCTTGTAATAATGGTTCT 39088
>seq250
Length=32566
Score = 257 bits (284), Expect = 3e-63
Identities = 538/804 (67%), Gaps = 14/804 (2%)
Strand=Plus/Minus
Query 49642 CATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATAC 49701
|| ||||||||||||| || ||| ||||||||||||| |||| || ||||| |||||||
Sbjct 29370 CAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATAC 29311
Query 49702 CCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtt 49761
||||||| || ||| | |||||| | | |||||||||| | || |||||||
Sbjct 29310 CCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAA 29251
Query 49762 taattatcataattatattattttttgataatttatatttaatatgattcgcatatatta 49821
||| ||| | || | |||| | || | | | | | | | | | | | |
Sbjct 29250 CAATAATCTT--TTCAACAATTTCTGGAGATGGTCTGTGTTGCAAG-TGGGAGAACAACA 29194
Query 49822 aACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 49881
|||| |||||||||||||||||||| || || ||| | || |||||||| ||||| |
Sbjct 29193 AACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCA 29134
Query 49882 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 49941
| |||||||| || ||||||||||| | ||| || || || ||||| || | ||||
Sbjct 29133 AACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGA 29074
Query 49942 ATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---AT 49998
| ||||| || | | ||||| || | | |||| | || | ||| ||| ||
Sbjct 29073 AAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATA---TAAAGCATCTTTAT 29017
Query 49999 CTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAG 50058
|| ||||| || || ||||| || ||||| || | ||| | || || ||||| || |
Sbjct 29016 CTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGG 28957
Query 50059 CTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAAT 50118
| ||||| || || ||| | |||||||||||||
Sbjct 28956 CATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAAT 28897
Query 50119 ACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTG 50178
||||||||||||| | |||||| ||||| || ||| ||| | | |||||||
Sbjct 28896 ACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTG 28837
Query 50179 AATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATG 50238
|| ||||| | | | || ||||| || || ||| |||||||||||||| |
Sbjct 28836 GCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAG 28777
Query 50239 CTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATT----T 50294
| ||||| || |||||||| || ||||| ||||||||| || ||||| || |
Sbjct 28776 CAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGT 28717
Query 50295 TCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACG 50354
||| | || ||| ||| || |||||| |||||||| ||||| || || ||| ||
Sbjct 28716 TCCAATCATCCAA-ATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCG 28658
Query 50355 GATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTA 50414
| ||||||||| | | | || ||| || || ||| ||||| | ||||| ||
Sbjct 28657 GCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATAACGACGT 28598
Query 50415 GTAtttttttCTAATATCGGTTCT 50438
| |||| || ||||| ||||||
Sbjct 28597 TTGTTTTCTTGTAATAATGGTTCT 28574
>seq124
Length=102737
Score = 181 bits (200), Expect = 2e-40
Identities = 515/785 (66%), Gaps = 22/785 (3%)
Strand=Plus/Plus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650
||| |||||||||||||| | |||||||| || || || ||| | || || |
Sbjct 21150 CATGAAATCAAATGGATTAGTCACGTTATAATACTTATCAT-TACCAAAAGCAACCAACA 21208
Query 49651 ATCTATCGGCTACAA-ATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAAT 49709
|||||||||| |||| |||| |||||||| |||| || ||||||||||||||||| ||
Sbjct 21209 ATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAAA 21267
Query 49710 TTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaattat 49768
|| ||| | |||||| | || | ||||||| | || ||||||| | || ||
Sbjct 21268 GAAACTGGAAGCGCATCACTGAAGTACTTCTTTT-CAATACTAACAGCTTCAGTGATAAT 21326
Query 49769 cataattatattattttttgataatttatattt----aatatgattcgcatatattaaAC 49824
| | || ||| || ||| |||| | ||||| | ||| |||||
Sbjct 21327 CTT--TTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGA-----AAATAGTAAAC 21379
Query 49825 ATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 49884
| ||| |||| || || | ||| ||||||||| | || |||||||| |||||||| |
Sbjct 21380 AAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAAC 21439
Query 49885 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 49944
||||||| || ||||| ||||| | |||||| || || || || | | ||||| |
Sbjct 21440 CTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAAA 21499
Query 49945 TACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATA 50004
| || || | | |||||||| | | |||| || |||||| || || ||| |
Sbjct 21500 TGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCTTGAA 21559
Query 50005 TCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 50064
|||| | ||||||||||||||||||| || | ||||| || || || || |
Sbjct 21560 TCCATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGA 21619
Query 50065 ATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTT 50124
| || || || | ||||| | ||||| |||
Sbjct 21620 ACAAGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTT 21679
Query 50125 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACT 50184
| ||||| | | |||||| || || ||| |||| | | ||||| | | |
Sbjct 21680 CTGAATGGATATTTTCCATCATGATCTGGAATTTGTAAACCAGCTTGGCTTCAGGAAGTT 21739
Query 50185 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 50244
|||||| | | | || |||||| || || ||| || |||||||| ||||| || |
Sbjct 21740 TAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATGCAGCAA 21799
Query 50245 AGAATGCTAAAACGTATTTA-AT--AAAATGTTT-TTCATTATCTTTTAAATTTTCCCAA 50300
| || |||||||| | || | || ||||| ||| || |||| || ||||||||||
Sbjct 21800 AAAAGGCTAAAAC-TCTTGAGATGAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAA 21858
Query 50301 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTT 50360
|||| ||| || || || | ||||||| ||||||||||||||| || |||||
Sbjct 21859 TCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTC 21918
Query 50361 TTATA 50365
|| ||
Sbjct 21919 TTGTA 21923
>seq106
Length=24021
Score = 159 bits (176), Expect = 7e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || || |||| || || ||| || || |||||
Sbjct 4144 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 4203
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 4204 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 4263
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| ||||| |||||| ||| ||||| || | || || ||||| ||
Sbjct 4264 AATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGAC 4323
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | ||||| |||||||||||||| || || | || || ||||| ||
Sbjct 4324 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 4374
>seq297
Length=71103
Score = 149 bits (164), Expect = 1e-30
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 192306 AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365
|| ||||||||| | | || || || || ||||||| ||||| || || || ||
Sbjct 34799 AAAACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTC 34740
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| || |||| | || || |||||||||||||| || || ||||| |||||||| ||
Sbjct 34739 AGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGG 34680
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || |||||||||||||| ||||| ||| || ||| || | || || |||||
Sbjct 34679 TGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTC 34620
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| | ||| || |||||||||||||| || || | || || ||||||
Sbjct 34619 AACTTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATT 34568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984475370790450
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