Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq307 273 4e-68
seq250 268 2e-66
seq124 197 2e-45
seq297 161 2e-34
seq106 152 9e-32
>seq307
Length=48190
Score = 273 bits (302), Expect = 4e-68
Identities = 608/918 (66%), Gaps = 16/918 (2%)
Strand=Plus/Minus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
||||||||| ||||||||| | |||||||||||||| ||||| || | || || ||
Sbjct 39997 TTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGAAATATT 39938
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATA 38949
| ||| ||||| ||||| || | ||| ||| ||| | | || | || || |||
Sbjct 39937 TTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCT-TGTTACCCAAGGCAAATA 39879
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|||||||||| || ||| ||||||||||||| |||| || ||||| |||||||||||||
Sbjct 39878 ATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACCCAATA 39819
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
| || ||| | |||||| | | |||||||||| | || ||||||| ||| |
Sbjct 39818 AAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAACAATAA 39759
Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129
|| | || | |||| | || | | | | | | | | | | | ||||| |
Sbjct 39758 TCTT--TTCAACAATTTCTGGAGATGGTCTGTGTTGCAAG-TGGGAGAACAACAAACAAG 39702
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
||||||| |||||||||||||| || ||| | || |||||||| ||||| || ||||
Sbjct 39701 CAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCAAACCTG 39642
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249
|||| || ||||||||||| | ||| || || || ||||| || | ||||| ||||
Sbjct 39641 GCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGAAAATAC 39582
Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCTAAAA 39306
| || | | ||||| || | | |||| | || | ||| ||| |||| ||
Sbjct 39581 CTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATA---TAAAGCATCTTTATCTTGAA 39525
Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366
|||| || |||||||| || ||||| || | ||| | || || ||||| || || ||||
Sbjct 39524 TCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCATTAA 39465
Query 39367 ATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTT 39426
| || || |||||||||||
Sbjct 39464 ACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATACATTT 39405
Query 39427 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACT 39486
||||||| | |||||| ||||| || ||| ||| | ||||||| |
Sbjct 39404 CAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGCAGTT 39345
Query 39487 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 39546
| ||||||| | | || ||||| || || ||| |||||||||||||| || ||||
Sbjct 39344 GGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGCAGCGA 39285
Query 39547 AGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT----TTCCCAA 39602
| || |||||||| || ||||| ||||||||| || ||||| || |||| |
Sbjct 39284 AAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTTCCAAT 39225
Query 39603 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTT 39662
|| ||| ||| || |||||| |||||||| ||||| || || ||| ||| ||||
Sbjct 39224 CATCCAA-ATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCGGCTTTT 39166
Query 39663 TTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAttt 39722
||||| | | | || ||| || || ||| ||||| | ||||| || | |||
Sbjct 39165 TTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATAACGACGTTTGTTT 39106
Query 39723 ttttCTAATATCGGTTCT 39740
| || ||||| ||||||
Sbjct 39105 TCTTGTAATAATGGTTCT 39088
>seq250
Length=32566
Score = 268 bits (296), Expect = 2e-66
Identities = 607/918 (66%), Gaps = 16/918 (2%)
Strand=Plus/Minus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
||||||||| ||||||||| | |||||||||||||| ||||| || | || || ||
Sbjct 29483 TTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGAAATATT 29424
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATA 38949
| ||| ||||| ||||| || | ||| ||| ||| | | || | || || |||
Sbjct 29423 TTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCT-TGTTACCCAAGGCAAATA 29365
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|||||||||| || ||| ||||||||||||| |||| || ||||| |||||||||||||
Sbjct 29364 ATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACCCAATA 29305
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
| || ||| | |||||| | | |||||||||| | || ||||||| ||| |
Sbjct 29304 AAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAACAATAA 29245
Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129
|| | || | |||| | || | | | | | | | | | | | ||||| |
Sbjct 29244 TCTT--TTCAACAATTTCTGGAGATGGTCTGTGTTGCAAG-TGGGAGAACAACAAACAAG 29188
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
||||||| |||||||||||||| || ||| | || |||||||| ||||| || ||||
Sbjct 29187 CAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCAAACCTG 29128
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249
|||| || ||||||||||| | ||| || || || ||||| || | ||||| ||||
Sbjct 29127 GCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGAAAATAC 29068
Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCTAAAA 39306
| || | | ||||| || | | |||| | || | ||| ||| |||| ||
Sbjct 29067 CTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATA---TAAAGCATCTTTATCTTGAA 29011
Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366
|||| || |||||||| || ||||| || | ||| | || || ||||| || || ||||
Sbjct 29010 TCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCATTAA 28951
Query 39367 ATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTT 39426
| || || |||||||||||
Sbjct 28950 ACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATACATTT 28891
Query 39427 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACT 39486
||||||| | |||||| ||||| || ||| ||| | ||||||| |
Sbjct 28890 CAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGCAGTT 28831
Query 39487 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 39546
| ||||| | | | || ||||| || || ||| |||||||||||||| || ||||
Sbjct 28830 GGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGCAGCGA 28771
Query 39547 AGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT----TTCCCAA 39602
| || |||||||| || ||||| ||||||||| || ||||| || |||| |
Sbjct 28770 AAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTTCCAAT 28711
Query 39603 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTT 39662
|| ||| ||| || |||||| |||||||| ||||| || || ||| ||| ||||
Sbjct 28710 CATCCAA-ATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCGGCTTTT 28652
Query 39663 TTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAttt 39722
||||| | | | || ||| || || ||| ||||| | ||||| || | |||
Sbjct 28651 TTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATAACGACGTTTGTTT 28592
Query 39723 ttttCTAATATCGGTTCT 39740
| || ||||| ||||||
Sbjct 28591 TCTTGTAATAATGGTTCT 28574
>seq124
Length=102737
Score = 197 bits (218), Expect = 2e-45
Identities = 354/508 (70%), Gaps = 17/508 (3%)
Strand=Plus/Plus
Query 38833 TTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAAT 38892
||||||| ||||| ||| | ||||| || || || ||||| || | || ||||| |
Sbjct 21089 TTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTT 21148
Query 38893 TCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAAT 38951
||| |||||||||||||| | |||||||| || || || ||| | || ||
Sbjct 21149 CCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCAT-TACCAAAAGCAACCAAC 21207
Query 38952 AATCTATCGGCCACAA-ATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||||| |||| |||| |||||||| |||| || ||||||||||||||||| ||
Sbjct 21208 AATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAA 21266
Query 39011 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| ||| | |||||| | || | ||||||| | || ||||||| | || |
Sbjct 21267 AGAAACTGGAAGCGCATCACTGAAGTACTTCTTTT-CAATACTAACAGCTTCAGTGATAA 21325
Query 39070 tcataattatattattttttgataatttatattt----aatatgattcgcatataGTAAA 39125
|| | || ||| || ||| |||| | ||||| | ||||||||
Sbjct 21326 TCTT--TTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGA-----AAATAGTAAA 21378
Query 39126 CATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 39185
|| ||| |||| || || | ||||||||||||| | || |||||||| ||||||||
Sbjct 21379 CAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAA 21438
Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245
|||||||| || ||||| ||||| | |||||| || || || || | | |||||
Sbjct 21439 CCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAA 21498
Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305
|| || || | | |||||||| | | |||| || |||||| || || ||| |
Sbjct 21499 ATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCTTGA 21558
Query 39306 ATCCAATTTATGGCCCAATCTGCttttt 39333
||||| | || ||||||||||||||||
Sbjct 21559 ATCCATCTAATAGCCCAATCTGCTTTTT 21586
>seq297
Length=71103
Score = 161 bits (178), Expect = 2e-34
Identities = 175/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898
|| ||||||||| | || || || || || ||||||| ||||| ||| || || ||
Sbjct 34799 AAAACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTC 34740
Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
|| || | || |||| || |||||||||||||| ||||| ||||| ||||| || ||
Sbjct 34739 AGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGG 34680
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018
||| || |||||||||||||| ||||| ||| || ||| || || || || |||||
Sbjct 34679 TGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTC 34620
Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | ||| || |||||||||||||| || || | ||| || ||||||
Sbjct 34619 AACTTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATT 34568
>seq106
Length=24021
Score = 152 bits (168), Expect = 9e-32
Identities = 177/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || || |||| || || || ||
Sbjct 4136 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTG 4195
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||||||||||||||| || ||||| |||||
Sbjct 4196 TAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGA 4255
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| ||||| || |||||||| ||||| |||||| ||| ||||| || || || ||
Sbjct 4256 TCTGGTGGAATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAG 4315
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| | ||||| |||||||||||||| || || | ||| || ||||| ||
Sbjct 4316 GATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 4374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905131847688600
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