Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq307 159 1e-33
seq250 159 1e-33
seq325 150 5e-31
seq51 150 5e-31
seq225 111 5e-19
seq200 102 2e-16
seq76 100 8e-16
seq314 84.2 6e-11
seq283 84.2 6e-11
>seq307
Length=48190
Score = 159 bits (176), Expect = 1e-33
Identities = 425/638 (67%), Gaps = 20/638 (3%)
Strand=Plus/Plus
Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262
|||||||| ||||| |||||| ||||||| ||||| ||||| |||||||||||||
Sbjct 39249 ATGAAAAATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTATTGTTG 39308
Query 133263 TTGAAAATTT--AGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTT 133320
|||||| || ||| || ||| | ||||| |||||| | ||||| | ||
Sbjct 39309 GTGAAAACTTGATTGAAAAC--TTTTCTGCCGAAGTCCAACTGCCAGAAGCTAAATCATT 39366
Query 133321 TTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGA 133380
||||| | || || ||||||||| || |||||| | |||||| |||||||
Sbjct 39367 CTATGGTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAATTGA 39426
Query 133381 TACTTACATCAAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTAGCGAATTT 133438
||||| | |||| ||| | |||||| | | || || |||||| | ||
Sbjct 39427 AACTTATGTTAAAG--ACCCACAAGAAGCTGATTTCTTGTTTAATGCCATTGAAAACATT 39484
Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498
|| ||||||| |||||| |||| ||||| || |||||||| || || || |||
Sbjct 39485 CCATGTATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGATGCTTTA 39544
Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558
| |||| | | ||||||||||||| | || || ||||| ||||||||| | ||
Sbjct 39545 TATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCATT- 39603
Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617
||| ||||| || ||| | |||||| | ||| | | || || || ||| || || ||
Sbjct 39604 TGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGA 39663
Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATT 133677
| | || | || || || | | || || || ||||| ||| | ||| | ||
Sbjct 39664 ATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCACTT 39723
Query 133678 ---AGAGCGACCA-CTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAA 133733
| | ||||| ||| | || | ||||| | |||||| ||||| |||||
Sbjct 39724 GCAACACAGACCATCTCCAGAA----ATTGTTGAAAAGATTATTGTTGAAGCTGTTGATG 39779
Query 133734 TTGAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATGAATGATGTG 133792
|||| |||| | ||| | |||||| || || | |||| | |||||||| ||
Sbjct 39780 TTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTC-TTTATTGGGTATGAACTGTGAC 39838
Query 133793 CTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830
||||| | ||| |||||| ||| ||||| |||||
Sbjct 39839 TTGATGTGTCAATATGTTGAATATGTTGCTGATAGATT 39876
>seq250
Length=32566
Score = 159 bits (176), Expect = 1e-33
Identities = 425/638 (67%), Gaps = 20/638 (3%)
Strand=Plus/Plus
Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262
|||||||| ||||| |||||| ||||||| ||||| ||||| |||||||||||||
Sbjct 28735 ATGAAAAATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTATTGTTG 28794
Query 133263 TTGAAAATTT--AGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTT 133320
|||||| || ||| || ||| | ||||| |||||| | ||||| | ||
Sbjct 28795 GTGAAAACTTGATTGAAAAC--TTTTCTGCTGAAGTCCAACTGCCAGAAGCTAAATCATT 28852
Query 133321 TTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGA 133380
||||| | || || ||||||||| || |||||| | |||||| |||||||
Sbjct 28853 CTATGGTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAATTGA 28912
Query 133381 TACTTACATCAAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTAGCGAATTT 133438
||||| | |||| ||| | |||||| | | || || |||||| | ||
Sbjct 28913 AACTTATGTTAAAG--ACCCACAAGAAGCTGATTTCTTGTTTAATGCCATTGAAAACATT 28970
Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498
|| ||||||| |||||| |||| ||||| || |||||||| || || || |||
Sbjct 28971 CCATGTATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGATGCTTTA 29030
Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558
| |||| | | ||||||||||||| | || || ||||| ||||||||| | ||
Sbjct 29031 TATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCATT- 29089
Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617
||| ||||| || ||| | |||||| | ||| | | || || || ||| || || ||
Sbjct 29090 TGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGA 29149
Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATT 133677
| | || | || || || | | || || || ||||| ||| | ||| | ||
Sbjct 29150 ATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCACTT 29209
Query 133678 ---AGAGCGACCA-CTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAA 133733
| | ||||| ||| | || | ||||| | |||||| ||||| |||||
Sbjct 29210 GCAACACAGACCATCTCCAGAA----ATTGTTGAAAAGATTATTGTTGAAGCTGTTGATG 29265
Query 133734 TTGAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATGAATGATGTG 133792
|||| |||| | ||| | |||||| || || | |||| | |||||||| ||
Sbjct 29266 TTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTC-TTTATTGGGTATGAACTGTGAC 29324
Query 133793 CTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830
||||| | ||| |||||| ||| ||||| |||||
Sbjct 29325 TTGATGTGTCAATATGTTGAATATGTTGCTGATAGATT 29362
>seq325
Length=13538
Score = 150 bits (166), Expect = 5e-31
Identities = 210/294 (71%), Gaps = 3/294 (1%)
Strand=Plus/Minus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
||| |||| || | ||||||| ||| |||||| ||||| ||||| ||||| ||
Sbjct 11251 TGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACG 11192
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
|||||| || ||||| || | | ||||||||||||||| |||||||| ||||| || ||
Sbjct 11191 AGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACC 11132
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | | ||||| || |||| || || || || | ||||||||||| | |
Sbjct 11131 AGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACT 11072
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
|| |||||| ||| ||| || | ||||| | ||||||||||||| |||||||| |
Sbjct 11071 CTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTT 11012
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAA 156316
||| | || | | || ||| | ||| |||| ||| || || || |||||
Sbjct 11011 CATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAA 10958
>seq51
Length=22326
Score = 150 bits (166), Expect = 5e-31
Identities = 210/294 (71%), Gaps = 3/294 (1%)
Strand=Plus/Minus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
||| |||| || | ||||||| ||| |||||| ||||| ||||| ||||| ||
Sbjct 19520 TGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACG 19461
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
|||||| || ||||| || | | ||||||||||||||| |||||||| ||||| || ||
Sbjct 19460 AGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACC 19401
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | | ||||| || |||| || || || || | ||||||||||| | |
Sbjct 19400 AGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACT 19341
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
|| |||||| ||| ||| || | ||||| | ||||||||||||| |||||||| |
Sbjct 19340 CTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTT 19281
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAA 156316
||| | || | | || ||| | ||| |||| ||| || || || |||||
Sbjct 19280 CATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAA 19227
>seq225
Length=63085
Score = 111 bits (122), Expect = 5e-19
Identities = 346/529 (65%), Gaps = 15/529 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| ||||| | ||||| | ||||||| ||| || ||||| | ||| || || ||
Sbjct 58912 CTGTCAAAACGACCAGGTCTCATTAATGCCTTGTCCAAAATATCAGGTCTATTGGTACCT 58853
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
|| || ||||| | || || | ||| |||||||| ||| | ||||||
Sbjct 58852 GCTAACACAACGACGTGGTCAGTAGTATCAAACCCATCCATTTCAACTAACAATTGATTC 58793
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCC---GAATCGCTCCttttt 289026
| || ||| | ||||||||| | ||| ||| || || ||| | || |
Sbjct 58792 AAGGTGGTTTCACGTTCATCATTAGCACCAGTTGCATTTCCTTTAGAA------CGTTGT 58739
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||| |||||||||||| |||| ||||| | | |||| ||||| ||| ||| |
Sbjct 58738 TTACCAATAGCATCAATTTCATCAACGAAAACAATCGAAGGAGCATTTTCTCTAGCAGTC 58679
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
||| || || | || | || || || | |||||| ||||||| ||||||||||||
Sbjct 58678 TTAAACAAATCACGAACTCTTGAGGCACCTACACCAACGAACATTTCAACAAATTCAGAA 58619
Query 289147 GCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205
| || || || | |||| ||| ||||| || || ||| | || | | ||
Sbjct 58618 CCAGAAAC-AGATTAAAATGGAACACCAGCTTCACCAGCAGTTGCTTTAGCTAATAAAGT 58560
Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265
||||| || || ||||| || ||| | | |||| |||| | ||| |||||
Sbjct 58559 TTTACCAGTACCTGGTGGACCGGATAAAATAGCTCCTCTTGGGATTTTGGCCCCCAATTT 58500
Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325
|| ||||| || || | | ||| |||| |||| |||| || ||| | ||| || ||
Sbjct 58499 CTCGTATTTTTCGGGTTTTTGTAAGAATTTAACAAATTCCATAACTTCTTGTTTGGCTTC 58440
Query 289326 ATCACAT-CCTGCTACATCAGCAAAAGTAATATTAATATCG--TTCTTG 289371
|| ||| || || ||||| || | || || |||||| ||||||
Sbjct 58439 TTC-CATACCAGCAACATCTTTGAATTTGATCTTGATATCGGTTTCTTG 58392
>seq200
Length=22650
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| || |||||||||||||| | ||| | |||||||| ||||||||||||||
Sbjct 18454 ATCATAATGAACCATAATGTCTTCCAAAGCCTTAACCAAACGACGTTGAATATAACCAGT 18513
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | || || || || |||||||| ||||| | | |||| |||| |||||||| ||
Sbjct 18514 TTCGGCAGTCTTGACGGCAGTATCAATAAGACCTTCTCTACCAGCCATCGCATGGAAAAA 18573
Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732
| |||| || || || | | | ||||| | ||||| ||||| | || ||
Sbjct 18574 GAATTCTTGTGGAGTTAAACCTCTCAAATAGGAGTTTTCAACAAAACCTTTTGATTCTGG 18633
Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCA 302761
|| | ||| ||||| || |||||||
Sbjct 18634 TGAGTAGTCATCTTTGGTGAAATGTGGCA 18662
>seq76
Length=37852
Score = 100 bits (110), Expect = 8e-16
Identities = 216/319 (68%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA--ATT 289086
||||| ||||| | ||| || |||||||| | | || | |||| ||| || |||
Sbjct 17505 ACCAATGGCATCTAATTCATCGATGAAAATAATAGCAGGTGCTTTTTCTCTTGCTTGATT 17446
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
| |||||||| | | | || || | ||||||||||| ||| |||||||||||
Sbjct 17445 G--AATAATTCACGAATTCTTTTAGCACCCACACCAACATACAATTCATCAAATTCAGAA 17388
Query 289147 GCGGATACTTGA--ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204
| | || ||| | |||| ||| |||||| || ||| ||| || |||| | |
Sbjct 17387 CC--AGACATGAAGAAAAATGGAACACCTGCTTCACCAGCTGTTGCTCTTGCCAATAAAG 17330
Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264
||||||| || || || || || ||||| || || ||||||| ||| | || |
Sbjct 17329 TCTTACCAGTACCTGGAGGGCCAGTTAATAATACACCTTTTGGTAATTTACCACCTAATG 17270
Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324
|| |||| ||| ||||||||||| |||||||| || | |||| | | || |
Sbjct 17269 CGGTAAATTTAGAAGGATCTTTTAAAAATTCAACAATTTCTTCTAATTCAGCTCTGGCTT 17210
Query 289325 CATCACATCCTGCTACATC 289343
||||||||||| |||||
Sbjct 17209 CATCACATCCTTGAACATC 17191
>seq314
Length=117011
Score = 84.2 bits (92), Expect = 6e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
||||| |||||||| ||| |||| || || | ||| | || ||| || ||| |
Sbjct 30258 ACCAATAGCATCAACTTCATCAAAAAATATAATACATGCTTTCTTAGTTCTTGCCATTTC 30317
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|||||||||||| || ||| || ||||||||| ||| || |||||||| |
Sbjct 30318 AAATAATTCTCTAACCATTCTTGCACCTTCACCAACATATTTTTGCACCAATTCAGACCC 30377
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGC-CAGAAGTGTCT 289207
|| ||||||| ||| ||| | | | ||| || || ||||| || ||| ||||
Sbjct 30378 AATCACACGAATGAAAGTTGCATCAGTTCTGTTTGCAACGGCTCTCGCACACAAG-GTCT 30436
Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGG 289247
|||| || || |||||||| | |||| || ||||||||
Sbjct 30437 TACCAGTACCTGGTGGTCCATACAATAAAATACCCTTTGG 30476
>seq283
Length=47260
Score = 84.2 bits (92), Expect = 6e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| ||||||||||||||||| | ||||| ||||| | ||||| ||||||||| |
Sbjct 21051 GCACCATGAGCAATCATACAATCTCTCTCCATCTCACCGAAACGCAAACCACCATCTCTG 20992
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392
|| ||||| | || | ||| | || ||||| |||||| ||| | | ||
Sbjct 20991 GATCTACCTTCAACAGGTTGTCTTGTCAAAACTTGCACTGGACCTCTAGCTCTAGCATGG 20932
Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAA 233441
|| ||||| | |||||||| ||| ||| ||||||| |||||||
Sbjct 20931 ATCTTATCATCCACCATATGTCTCAATCTTTGATAATAAGTAGGACCAA 20883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810679237679
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