Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq307 159 1e-33 seq250 159 1e-33 seq325 150 5e-31 seq51 150 5e-31 seq225 111 5e-19 seq200 102 2e-16 seq76 100 8e-16 seq314 84.2 6e-11 seq283 84.2 6e-11 >seq307 Length=48190 Score = 159 bits (176), Expect = 1e-33 Identities = 425/638 (67%), Gaps = 20/638 (3%) Strand=Plus/Plus Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262 |||||||| ||||| |||||| ||||||| ||||| ||||| ||||||||||||| Sbjct 39249 ATGAAAAATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTATTGTTG 39308 Query 133263 TTGAAAATTT--AGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTT 133320 |||||| || ||| || ||| | ||||| |||||| | ||||| | || Sbjct 39309 GTGAAAACTTGATTGAAAAC--TTTTCTGCCGAAGTCCAACTGCCAGAAGCTAAATCATT 39366 Query 133321 TTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGA 133380 ||||| | || || ||||||||| || |||||| | |||||| ||||||| Sbjct 39367 CTATGGTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAATTGA 39426 Query 133381 TACTTACATCAAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTAGCGAATTT 133438 ||||| | |||| ||| | |||||| | | || || |||||| | || Sbjct 39427 AACTTATGTTAAAG--ACCCACAAGAAGCTGATTTCTTGTTTAATGCCATTGAAAACATT 39484 Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498 || ||||||| |||||| |||| ||||| || |||||||| || || || ||| Sbjct 39485 CCATGTATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGATGCTTTA 39544 Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558 | |||| | | ||||||||||||| | || || ||||| ||||||||| | || Sbjct 39545 TATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCATT- 39603 Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 ||| ||||| || ||| | |||||| | ||| | | || || || ||| || || || Sbjct 39604 TGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGA 39663 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATT 133677 | | || | || || || | | || || || ||||| ||| | ||| | || Sbjct 39664 ATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCACTT 39723 Query 133678 ---AGAGCGACCA-CTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAA 133733 | | ||||| ||| | || | ||||| | |||||| ||||| ||||| Sbjct 39724 GCAACACAGACCATCTCCAGAA----ATTGTTGAAAAGATTATTGTTGAAGCTGTTGATG 39779 Query 133734 TTGAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATGAATGATGTG 133792 |||| |||| | ||| | |||||| || || | |||| | |||||||| || Sbjct 39780 TTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTC-TTTATTGGGTATGAACTGTGAC 39838 Query 133793 CTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830 ||||| | ||| |||||| ||| ||||| ||||| Sbjct 39839 TTGATGTGTCAATATGTTGAATATGTTGCTGATAGATT 39876 >seq250 Length=32566 Score = 159 bits (176), Expect = 1e-33 Identities = 425/638 (67%), Gaps = 20/638 (3%) Strand=Plus/Plus Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262 |||||||| ||||| |||||| ||||||| ||||| ||||| ||||||||||||| Sbjct 28735 ATGAAAAATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTATTGTTG 28794 Query 133263 TTGAAAATTT--AGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTT 133320 |||||| || ||| || ||| | ||||| |||||| | ||||| | || Sbjct 28795 GTGAAAACTTGATTGAAAAC--TTTTCTGCTGAAGTCCAACTGCCAGAAGCTAAATCATT 28852 Query 133321 TTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGA 133380 ||||| | || || ||||||||| || |||||| | |||||| ||||||| Sbjct 28853 CTATGGTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAATTGA 28912 Query 133381 TACTTACATCAAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTAGCGAATTT 133438 ||||| | |||| ||| | |||||| | | || || |||||| | || Sbjct 28913 AACTTATGTTAAAG--ACCCACAAGAAGCTGATTTCTTGTTTAATGCCATTGAAAACATT 28970 Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498 || ||||||| |||||| |||| ||||| || |||||||| || || || ||| Sbjct 28971 CCATGTATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGATGCTTTA 29030 Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558 | |||| | | ||||||||||||| | || || ||||| ||||||||| | || Sbjct 29031 TATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCATT- 29089 Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 ||| ||||| || ||| | |||||| | ||| | | || || || ||| || || || Sbjct 29090 TGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGA 29149 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATT 133677 | | || | || || || | | || || || ||||| ||| | ||| | || Sbjct 29150 ATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCACTT 29209 Query 133678 ---AGAGCGACCA-CTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAA 133733 | | ||||| ||| | || | ||||| | |||||| ||||| ||||| Sbjct 29210 GCAACACAGACCATCTCCAGAA----ATTGTTGAAAAGATTATTGTTGAAGCTGTTGATG 29265 Query 133734 TTGAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATGAATGATGTG 133792 |||| |||| | ||| | |||||| || || | |||| | |||||||| || Sbjct 29266 TTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTC-TTTATTGGGTATGAACTGTGAC 29324 Query 133793 CTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830 ||||| | ||| |||||| ||| ||||| ||||| Sbjct 29325 TTGATGTGTCAATATGTTGAATATGTTGCTGATAGATT 29362 >seq325 Length=13538 Score = 150 bits (166), Expect = 5e-31 Identities = 210/294 (71%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082 ||| |||| || | ||||||| ||| |||||| ||||| ||||| ||||| || Sbjct 11251 TGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACG 11192 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 |||||| || ||||| || | | ||||||||||||||| |||||||| ||||| || || Sbjct 11191 AGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACC 11132 Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202 ||| | | ||||| || |||| || || || || | ||||||||||| | | Sbjct 11131 AGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACT 11072 Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 || |||||| ||| ||| || | ||||| | ||||||||||||| |||||||| | Sbjct 11071 CTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTT 11012 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAA 156316 ||| | || | | || ||| | ||| |||| ||| || || || ||||| Sbjct 11011 CATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAA 10958 >seq51 Length=22326 Score = 150 bits (166), Expect = 5e-31 Identities = 210/294 (71%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082 ||| |||| || | ||||||| ||| |||||| ||||| ||||| ||||| || Sbjct 19520 TGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACG 19461 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 |||||| || ||||| || | | ||||||||||||||| |||||||| ||||| || || Sbjct 19460 AGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACC 19401 Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202 ||| | | ||||| || |||| || || || || | ||||||||||| | | Sbjct 19400 AGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACT 19341 Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 || |||||| ||| ||| || | ||||| | ||||||||||||| |||||||| | Sbjct 19340 CTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTT 19281 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAA 156316 ||| | || | | || ||| | ||| |||| ||| || || || ||||| Sbjct 19280 CATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAA 19227 >seq225 Length=63085 Score = 111 bits (122), Expect = 5e-19 Identities = 346/529 (65%), Gaps = 15/529 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || ||||| | ||||| | ||||||| ||| || ||||| | ||| || || || Sbjct 58912 CTGTCAAAACGACCAGGTCTCATTAATGCCTTGTCCAAAATATCAGGTCTATTGGTACCT 58853 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || || ||||| | || || | ||| |||||||| ||| | |||||| Sbjct 58852 GCTAACACAACGACGTGGTCAGTAGTATCAAACCCATCCATTTCAACTAACAATTGATTC 58793 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCC---GAATCGCTCCttttt 289026 | || ||| | ||||||||| | ||| ||| || || ||| | || | Sbjct 58792 AAGGTGGTTTCACGTTCATCATTAGCACCAGTTGCATTTCCTTTAGAA------CGTTGT 58739 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||| |||||||||||| |||| ||||| | | |||| ||||| ||| ||| | Sbjct 58738 TTACCAATAGCATCAATTTCATCAACGAAAACAATCGAAGGAGCATTTTCTCTAGCAGTC 58679 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||| || || | || | || || || | |||||| ||||||| |||||||||||| Sbjct 58678 TTAAACAAATCACGAACTCTTGAGGCACCTACACCAACGAACATTTCAACAAATTCAGAA 58619 Query 289147 GCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | || || || | |||| ||| ||||| || || ||| | || | | || Sbjct 58618 CCAGAAAC-AGATTAAAATGGAACACCAGCTTCACCAGCAGTTGCTTTAGCTAATAAAGT 58560 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 ||||| || || ||||| || ||| | | |||| |||| | ||| ||||| Sbjct 58559 TTTACCAGTACCTGGTGGACCGGATAAAATAGCTCCTCTTGGGATTTTGGCCCCCAATTT 58500 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 || ||||| || || | | ||| |||| |||| |||| || ||| | ||| || || Sbjct 58499 CTCGTATTTTTCGGGTTTTTGTAAGAATTTAACAAATTCCATAACTTCTTGTTTGGCTTC 58440 Query 289326 ATCACAT-CCTGCTACATCAGCAAAAGTAATATTAATATCG--TTCTTG 289371 || ||| || || ||||| || | || || |||||| |||||| Sbjct 58439 TTC-CATACCAGCAACATCTTTGAATTTGATCTTGATATCGGTTTCTTG 58392 >seq200 Length=22650 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| || |||||||||||||| | ||| | |||||||| |||||||||||||| Sbjct 18454 ATCATAATGAACCATAATGTCTTCCAAAGCCTTAACCAAACGACGTTGAATATAACCAGT 18513 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | || || || || |||||||| ||||| | | |||| |||| |||||||| || Sbjct 18514 TTCGGCAGTCTTGACGGCAGTATCAATAAGACCTTCTCTACCAGCCATCGCATGGAAAAA 18573 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | |||| || || || | | | ||||| | ||||| ||||| | || || Sbjct 18574 GAATTCTTGTGGAGTTAAACCTCTCAAATAGGAGTTTTCAACAAAACCTTTTGATTCTGG 18633 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCA 302761 || | ||| ||||| || ||||||| Sbjct 18634 TGAGTAGTCATCTTTGGTGAAATGTGGCA 18662 >seq76 Length=37852 Score = 100 bits (110), Expect = 8e-16 Identities = 216/319 (68%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA--ATT 289086 ||||| ||||| | ||| || |||||||| | | || | |||| ||| || ||| Sbjct 17505 ACCAATGGCATCTAATTCATCGATGAAAATAATAGCAGGTGCTTTTTCTCTTGCTTGATT 17446 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 | |||||||| | | | || || | ||||||||||| ||| ||||||||||| Sbjct 17445 G--AATAATTCACGAATTCTTTTAGCACCCACACCAACATACAATTCATCAAATTCAGAA 17388 Query 289147 GCGGATACTTGA--ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || ||| | |||| ||| |||||| || ||| ||| || |||| | | Sbjct 17387 CC--AGACATGAAGAAAAATGGAACACCTGCTTCACCAGCTGTTGCTCTTGCCAATAAAG 17330 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 ||||||| || || || || || ||||| || || ||||||| ||| | || | Sbjct 17329 TCTTACCAGTACCTGGAGGGCCAGTTAATAATACACCTTTTGGTAATTTACCACCTAATG 17270 Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 || |||| ||| ||||||||||| |||||||| || | |||| | | || | Sbjct 17269 CGGTAAATTTAGAAGGATCTTTTAAAAATTCAACAATTTCTTCTAATTCAGCTCTGGCTT 17210 Query 289325 CATCACATCCTGCTACATC 289343 ||||||||||| ||||| Sbjct 17209 CATCACATCCTTGAACATC 17191 >seq314 Length=117011 Score = 84.2 bits (92), Expect = 6e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| |||||||| ||| |||| || || | ||| | || ||| || ||| | Sbjct 30258 ACCAATAGCATCAACTTCATCAAAAAATATAATACATGCTTTCTTAGTTCTTGCCATTTC 30317 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||||||||| || ||| || ||||||||| ||| || |||||||| | Sbjct 30318 AAATAATTCTCTAACCATTCTTGCACCTTCACCAACATATTTTTGCACCAATTCAGACCC 30377 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGC-CAGAAGTGTCT 289207 || ||||||| ||| ||| | | | ||| || || ||||| || ||| |||| Sbjct 30378 AATCACACGAATGAAAGTTGCATCAGTTCTGTTTGCAACGGCTCTCGCACACAAG-GTCT 30436 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGG 289247 |||| || || |||||||| | |||| || |||||||| Sbjct 30437 TACCAGTACCTGGTGGTCCATACAATAAAATACCCTTTGG 30476 >seq283 Length=47260 Score = 84.2 bits (92), Expect = 6e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 ||||| ||||||||||||||||| | ||||| ||||| | ||||| ||||||||| | Sbjct 21051 GCACCATGAGCAATCATACAATCTCTCTCCATCTCACCGAAACGCAAACCACCATCTCTG 20992 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 || ||||| | || | ||| | || ||||| |||||| ||| | | || Sbjct 20991 GATCTACCTTCAACAGGTTGTCTTGTCAAAACTTGCACTGGACCTCTAGCTCTAGCATGG 20932 Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAA 233441 || ||||| | |||||||| ||| ||| ||||||| ||||||| Sbjct 20931 ATCTTATCATCCACCATATGTCTCAATCTTTGATAATAAGTAGGACCAA 20883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810679237679