Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq259 168 8e-37 seq132 168 8e-37 seq311 87.8 2e-12 >seq259 Length=87679 Score = 168 bits (186), Expect = 8e-37 Identities = 426/640 (67%), Gaps = 26/640 (4%) Strand=Plus/Plus Query 172322 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTGCTTACTACaaaaaaaaTTGT 172381 ||| ||| |||||||||| | || || | |||||| | ||||| || ||| || Sbjct 62857 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 62913 Query 172382 ATATACTAA---TATCCTCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 172438 | | |||| |||| | | ||| | |||||| ||||| || ||||| ||| | || Sbjct 62914 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 62973 Query 172439 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 172498 | |||| | | |||||||||| ||||| | | |||||| |||||||| |||||||| Sbjct 62974 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 63033 Query 172499 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATG 172558 | | || || ||| | | ||||||||||| || ||| ||||||| || ||||| Sbjct 63034 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 63093 Query 172559 GAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGA 172618 |||||| || ||| |||||| || |||||| | ||||| || |||||||| || Sbjct 63094 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 63153 Query 172619 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 172676 || || ||| | | ||||| | ||| | | ||||||| | |||||| || | Sbjct 63154 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 63211 Query 172677 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCAT-ACTTT 172735 || | |||||| ||| | |||||||||||| | | ||||| || ||| |||| Sbjct 63212 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 63271 Query 172736 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 172783 | ||||| ||||| ||||||| ||| | | ||| ||| || || Sbjct 63272 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 63330 Query 172784 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172843 ||| ||||| |||| | || ||||| || |||| || |||| | ||| | || || Sbjct 63331 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 63390 Query 172844 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172902 || || || | |||| || | | || | |||||||||||| | | Sbjct 63391 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 63449 Query 172903 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172942 | |||| ||||||||||| ||||||| || |||| || Sbjct 63450 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 63489 >seq132 Length=62843 Score = 168 bits (186), Expect = 8e-37 Identities = 426/640 (67%), Gaps = 26/640 (4%) Strand=Plus/Minus Query 172322 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTGCTTACTACaaaaaaaaTTGT 172381 ||| ||| |||||||||| | || || | |||||| | ||||| || ||| || Sbjct 30972 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 30916 Query 172382 ATATACTAA---TATCCTCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 172438 | | |||| |||| | | ||| | |||||| ||||| || ||||| ||| | || Sbjct 30915 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 30856 Query 172439 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 172498 | |||| | | |||||||||| ||||| | | |||||| |||||||| |||||||| Sbjct 30855 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 30796 Query 172499 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATG 172558 | | || || ||| | | ||||||||||| || ||| ||||||| || ||||| Sbjct 30795 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 30736 Query 172559 GAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGA 172618 |||||| || ||| |||||| || |||||| | ||||| || |||||||| || Sbjct 30735 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 30676 Query 172619 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 172676 || || ||| | | ||||| | ||| | | ||||||| | |||||| || | Sbjct 30675 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 30618 Query 172677 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCAT-ACTTT 172735 || | |||||| ||| | |||||||||||| | | ||||| || ||| |||| Sbjct 30617 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 30558 Query 172736 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 172783 | ||||| ||||| ||||||| ||| | | ||| ||| || || Sbjct 30557 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 30499 Query 172784 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172843 ||| ||||| |||| | || ||||| || |||| || |||| | ||| | || || Sbjct 30498 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 30439 Query 172844 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172902 || || || | |||| || | | || | |||||||||||| | | Sbjct 30438 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 30380 Query 172903 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172942 | |||| ||||||||||| ||||||| || |||| || Sbjct 30379 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 30340 >seq311 Length=49457 Score = 87.8 bits (96), Expect = 2e-12 Identities = 257/388 (66%), Gaps = 20/388 (5%) Strand=Plus/Plus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||||||||||||||| ||||||||| ||| | || | |||| | |||||||| Sbjct 36985 ATTAAGGTTGCTCAATTGGCTGGGTATGTAAGTGAAAACACTGGTTATCATCATGGTGAG 37044 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT- 166068 ||| || | | || || ||| ||| || ||| | ||||||||| | |||||||| Sbjct 37045 CAATCATTGGTTCAGACCATCATTGGGTTGGCACAAAACTTTGTTGGTTCTAATAATATC 37104 Query 166069 AGCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 166127 | ||| ||| |||| ||||| ||||||| ||| | || |||||||||| Sbjct 37105 AACAT--CTTAAAACCAAATGGTTCCTTTGGTAGTAGAGCCGCTGGTGGTAAAGATTTCT 37162 Query 166128 CTGCATCAAGATATATTTATACCAAACCACAT-AAAATATTAAAATATATATTTAGAGAA 166186 | || | |||||||||| || || || ||| || || || | ||||| | | Sbjct 37163 CCGCTGCGAGATATATTTTCACAGAATTGAATGAAATTACTAGAA-AGATATTCAATCCA 37221 Query 166187 GAAGATGACCCTATTTTA-AATTATACTGTTGAGGGTGAAC---CTATTCA--------- 166233 ||||| || ||| || |||||| | || | ||||| || || | Sbjct 37222 TTGGATGATCC-ATTGTATAATTATGTTCAAGATGATGAACAAACTGTTGAACCAGAGTG 37280 Query 166234 TTTTATTCCAGTAATCCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGATG 166293 | | |||| || | ||| | |||||| | |||||| || |||||||| || || || Sbjct 37281 GTATCTTCCTGTTTTGCCAATGATTTTAGTCAATGGTGCTGAAGGTATTGGTACTGGTTG 37340 Query 166294 GTCATGTTTTATACCTCAATATAATCCT 166321 |||| | ||| ||| ||||||||| Sbjct 37341 GTCAACTAATATTCCTTCTTATAATCCT 37368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632486698453960