Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq259 168 8e-37
seq132 168 8e-37
seq311 87.8 2e-12
>seq259
Length=87679
Score = 168 bits (186), Expect = 8e-37
Identities = 426/640 (67%), Gaps = 26/640 (4%)
Strand=Plus/Plus
Query 172322 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTGCTTACTACaaaaaaaaTTGT 172381
||| ||| |||||||||| | || || | |||||| | ||||| || ||| ||
Sbjct 62857 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 62913
Query 172382 ATATACTAA---TATCCTCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 172438
| | |||| |||| | | ||| | |||||| ||||| || ||||| ||| | ||
Sbjct 62914 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 62973
Query 172439 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 172498
| |||| | | |||||||||| ||||| | | |||||| |||||||| ||||||||
Sbjct 62974 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 63033
Query 172499 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATG 172558
| | || || ||| | | ||||||||||| || ||| ||||||| || |||||
Sbjct 63034 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 63093
Query 172559 GAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGA 172618
|||||| || ||| |||||| || |||||| | ||||| || |||||||| ||
Sbjct 63094 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 63153
Query 172619 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 172676
|| || ||| | | ||||| | ||| | | ||||||| | |||||| || |
Sbjct 63154 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 63211
Query 172677 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCAT-ACTTT 172735
|| | |||||| ||| | |||||||||||| | | ||||| || ||| ||||
Sbjct 63212 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 63271
Query 172736 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 172783
| ||||| ||||| ||||||| ||| | | ||| ||| || ||
Sbjct 63272 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 63330
Query 172784 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172843
||| ||||| |||| | || ||||| || |||| || |||| | ||| | || ||
Sbjct 63331 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 63390
Query 172844 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172902
|| || || | |||| || | | || | |||||||||||| | |
Sbjct 63391 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 63449
Query 172903 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172942
| |||| ||||||||||| ||||||| || |||| ||
Sbjct 63450 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 63489
>seq132
Length=62843
Score = 168 bits (186), Expect = 8e-37
Identities = 426/640 (67%), Gaps = 26/640 (4%)
Strand=Plus/Minus
Query 172322 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTGCTTACTACaaaaaaaaTTGT 172381
||| ||| |||||||||| | || || | |||||| | ||||| || ||| ||
Sbjct 30972 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 30916
Query 172382 ATATACTAA---TATCCTCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 172438
| | |||| |||| | | ||| | |||||| ||||| || ||||| ||| | ||
Sbjct 30915 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 30856
Query 172439 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 172498
| |||| | | |||||||||| ||||| | | |||||| |||||||| ||||||||
Sbjct 30855 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 30796
Query 172499 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATG 172558
| | || || ||| | | ||||||||||| || ||| ||||||| || |||||
Sbjct 30795 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 30736
Query 172559 GAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGA 172618
|||||| || ||| |||||| || |||||| | ||||| || |||||||| ||
Sbjct 30735 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 30676
Query 172619 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 172676
|| || ||| | | ||||| | ||| | | ||||||| | |||||| || |
Sbjct 30675 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 30618
Query 172677 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCAT-ACTTT 172735
|| | |||||| ||| | |||||||||||| | | ||||| || ||| ||||
Sbjct 30617 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 30558
Query 172736 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 172783
| ||||| ||||| ||||||| ||| | | ||| ||| || ||
Sbjct 30557 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 30499
Query 172784 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172843
||| ||||| |||| | || ||||| || |||| || |||| | ||| | || ||
Sbjct 30498 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 30439
Query 172844 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172902
|| || || | |||| || | | || | |||||||||||| | |
Sbjct 30438 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 30380
Query 172903 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172942
| |||| ||||||||||| ||||||| || |||| ||
Sbjct 30379 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 30340
>seq311
Length=49457
Score = 87.8 bits (96), Expect = 2e-12
Identities = 257/388 (66%), Gaps = 20/388 (5%)
Strand=Plus/Plus
Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009
||||||||||||||||| ||||||||| ||| | || | |||| | ||||||||
Sbjct 36985 ATTAAGGTTGCTCAATTGGCTGGGTATGTAAGTGAAAACACTGGTTATCATCATGGTGAG 37044
Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT- 166068
||| || | | || || ||| ||| || ||| | ||||||||| | ||||||||
Sbjct 37045 CAATCATTGGTTCAGACCATCATTGGGTTGGCACAAAACTTTGTTGGTTCTAATAATATC 37104
Query 166069 AGCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 166127
| ||| ||| |||| ||||| ||||||| ||| | || ||||||||||
Sbjct 37105 AACAT--CTTAAAACCAAATGGTTCCTTTGGTAGTAGAGCCGCTGGTGGTAAAGATTTCT 37162
Query 166128 CTGCATCAAGATATATTTATACCAAACCACAT-AAAATATTAAAATATATATTTAGAGAA 166186
| || | |||||||||| || || || ||| || || || | ||||| | |
Sbjct 37163 CCGCTGCGAGATATATTTTCACAGAATTGAATGAAATTACTAGAA-AGATATTCAATCCA 37221
Query 166187 GAAGATGACCCTATTTTA-AATTATACTGTTGAGGGTGAAC---CTATTCA--------- 166233
||||| || ||| || |||||| | || | ||||| || || |
Sbjct 37222 TTGGATGATCC-ATTGTATAATTATGTTCAAGATGATGAACAAACTGTTGAACCAGAGTG 37280
Query 166234 TTTTATTCCAGTAATCCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGATG 166293
| | |||| || | ||| | |||||| | |||||| || |||||||| || || ||
Sbjct 37281 GTATCTTCCTGTTTTGCCAATGATTTTAGTCAATGGTGCTGAAGGTATTGGTACTGGTTG 37340
Query 166294 GTCATGTTTTATACCTCAATATAATCCT 166321
|||| | ||| ||| |||||||||
Sbjct 37341 GTCAACTAATATTCCTTCTTATAATCCT 37368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632486698453960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |