Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq106 159 3e-34 seq297 131 2e-25 >seq106 Length=24021 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||| |||||||||||||| | ||||| ||| || | Sbjct 4372 GATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTC 4313 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| || ||||||||||||||||| || || || ||||| Sbjct 4312 CGACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCA 4253 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || ||||| |||| ||| |||| |||| || || || Sbjct 4252 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 4193 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || | |||||||| ||| ||||| | || || || Sbjct 4192 CATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 4142 >seq297 Length=71103 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || || | || || |||| ||||||||||| || | ||||| ||| | Sbjct 34566 ACAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCT 34625 Query 24761 ACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 | ||||| | || |||| ||| | ||| |||||||| |||||||| || || || || Sbjct 34626 TCTGACACCATTGATAACGTCAAATCCAAA-ATCCAAGATAAAGAAGGTATTCCACCAGA 34684 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 ||||||| | ||||| || || || ||||| | || || |||| | |||| || || Sbjct 34685 TCAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTA 34744 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| ||||| || | |||||||| ||| ||||| | || || Sbjct 34745 CAACATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 34795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895536094760