Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq106 159 3e-34
seq297 131 2e-25
>seq106
Length=24021
Score = 159 bits (176), Expect = 3e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || |||| |||||||||||||| | ||||| ||| || |
Sbjct 4372 GATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTC 4313
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || ||| || ||||||||||||||||| || || || |||||
Sbjct 4312 CGACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCA 4253
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || ||||| |||| ||| |||| |||| || || ||
Sbjct 4252 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 4193
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| ||||||||||| || | |||||||| ||| ||||| | || || ||
Sbjct 4192 CATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 4142
>seq297
Length=71103
Score = 131 bits (144), Expect = 2e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| || || | || || |||| ||||||||||| || | ||||| ||| |
Sbjct 34566 ACAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCT 34625
Query 24761 ACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| ||||| | || |||| ||| | ||| |||||||| |||||||| || || || ||
Sbjct 34626 TCTGACACCATTGATAACGTCAAATCCAAA-ATCCAAGATAAAGAAGGTATTCCACCAGA 34684
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
||||||| | ||||| || || || ||||| | || || |||| | |||| || ||
Sbjct 34685 TCAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTA 34744
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| ||||| || | |||||||| ||| ||||| | || ||
Sbjct 34745 CAACATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 34795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895536094760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |