Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq259 163 4e-35
seq132 163 4e-35
seq311 96.9 4e-15
seq241 93.3 5e-14
>seq259
Length=87679
Score = 163 bits (180), Expect = 4e-35
Identities = 386/574 (67%), Gaps = 27/574 (5%)
Strand=Plus/Plus
Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587
||| | |||||| |||| || ||||| ||| | ||| |||| | | |||||||
Sbjct 62936 GAATTATTATGGTTTATTGCTGGATCAACCGATGCTAAAATTTTAACCAACAAAGGTGTT 62995
Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647
||| ||||| | | |||||| |||||||| ||||||||| | || || || | |
Sbjct 62996 AAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGT 63055
Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707
||||||||||| || ||| ||||||| || ||||||||||| || ||| |||||
Sbjct 63056 CGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATAT 63115
Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATT--AAGTCAAACTATAA 168765
| || |||||| | ||||| || |||||||| || || || ||| | | || |
Sbjct 63116 AAAGATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAG--ATATCATTA 63173
Query 168766 ATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCAC 168825
| | ||| | | ||| || | ||||||||||| | || | | ||| || ||||
Sbjct 63174 AGAAATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAG 63233
Query 168826 AACTTGATAAAATGGTTCTTCCCCCTTGTCA-CACTTTAGTGCAATTTTATGTAA----- 168879
| |||||||||||| | | || || ||||| |||| || ||||| ||||| |
Sbjct 63234 ATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTC 63292
Query 168880 --GGAAAAAATCAATCTTAGATTGTCA-----GTTGTATCAAAGATCAGCTGATTTAGGA 168932
||||| || | || ||| ||| |||||||| ||||| |||| | ||
Sbjct 63293 CCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGT 63352
Query 168933 TTAGGAGTACCTTATAATATTGGATTTTATTCATTTTTAAC--ACTTG--TGCTAAGTAA 168988
|| ||||| |||| || |||| | ||| | || ||||| | || |||| |
Sbjct 63353 TTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCT---CAT 63409
Query 168989 ATGGTGTAATTTGACGCCTGGAAAGTTTATTCATACTTTTGGAGATGTTCACGTGTATTC 169048
|||| | || || ||| | |||||||||||| | || |||| |||||||||||
Sbjct 63410 GTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTT 63468
Query 169049 AAACCATGTTGAACCTTTAAAGGTTCAA-TTGAA 169081
| ||||| || |||| || | ||| |||||
Sbjct 63469 GGATCATGTGGATGCTTTGAAAGAACAACTTGAA 63502
>seq132
Length=62843
Score = 163 bits (180), Expect = 4e-35
Identities = 386/574 (67%), Gaps = 27/574 (5%)
Strand=Plus/Minus
Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587
||| | |||||| |||| || ||||| ||| | ||| |||| | | |||||||
Sbjct 30893 GAATTATTATGGTTTATTGCTGGATCAACCGATGCTAAAATTTTAACCAACAAAGGTGTT 30834
Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647
||| ||||| | | |||||| |||||||| ||||||||| | || || || | |
Sbjct 30833 AAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGT 30774
Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707
||||||||||| || ||| ||||||| || ||||||||||| || ||| |||||
Sbjct 30773 CGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATAT 30714
Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATT--AAGTCAAACTATAA 168765
| || |||||| | ||||| || |||||||| || || || ||| | | || |
Sbjct 30713 AAAGATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAG--ATATCATTA 30656
Query 168766 ATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCAC 168825
| | ||| | | ||| || | ||||||||||| | || | | ||| || ||||
Sbjct 30655 AGAAATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAG 30596
Query 168826 AACTTGATAAAATGGTTCTTCCCCCTTGTCA-CACTTTAGTGCAATTTTATGTAA----- 168879
| |||||||||||| | | || || ||||| |||| || ||||| ||||| |
Sbjct 30595 ATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTC 30537
Query 168880 --GGAAAAAATCAATCTTAGATTGTCA-----GTTGTATCAAAGATCAGCTGATTTAGGA 168932
||||| || | || ||| ||| |||||||| ||||| |||| | ||
Sbjct 30536 CCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGT 30477
Query 168933 TTAGGAGTACCTTATAATATTGGATTTTATTCATTTTTAAC--ACTTG--TGCTAAGTAA 168988
|| ||||| |||| || |||| | ||| | || ||||| | || |||| |
Sbjct 30476 TTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCT---CAT 30420
Query 168989 ATGGTGTAATTTGACGCCTGGAAAGTTTATTCATACTTTTGGAGATGTTCACGTGTATTC 169048
|||| | || || ||| | |||||||||||| | || |||| |||||||||||
Sbjct 30419 GTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTT 30361
Query 169049 AAACCATGTTGAACCTTTAAAGGTTCAA-TTGAA 169081
| ||||| || |||| || | ||| |||||
Sbjct 30360 GGATCATGTGGATGCTTTGAAAGAACAACTTGAA 30327
>seq311
Length=49457
Score = 96.9 bits (106), Expect = 4e-15
Identities = 309/466 (66%), Gaps = 34/466 (7%)
Strand=Plus/Plus
Query 162924 TTGATGGTCTTAAAGAATCTCAAAGAAAGGTTATTTATGCC---AT-AAGaaaaaaaTTT 162979
|||||||| | ||| | ||||||||| ||| | |||| || ||||||||| ||
Sbjct 36917 TTGATGGTTTGAAACCAGGTCAAAGAAAAGTTTTGTATGGTTGTATCAAGAAAAAA--TT 36974
Query 162980 AGATCAAAAGGGGATTTTATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACA 163039
| ||||| | | ||||||||||||||||| ||||||||| ||| | ||
Sbjct 36975 A----AAAAGTGAA----ATTAAGGTTGCTCAATTGGCTGGGTATGTAAGTGAAAACACT 37026
Query 163040 GACTATAAACACGGTGAACAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTT 163099
| ||| | || ||||| ||| || | | || || ||| ||| || ||| | |||
Sbjct 37027 GGTTATCATCATGGTGAGCAATCATTGGTTCAGACCATCATTGGGTTGGCACAAAACTTT 37086
Query 163100 GTTGGTACAAATAATAT-AGCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAG 163157
|||||| | |||||||| | ||| ||| |||| ||||| ||||||| ||| |
Sbjct 37087 GTTGGTTCTAATAATATCAACAT--CTTAAAACCAAATGGTTCCTTTGGTAGTAGAGCCG 37144
Query 163158 AAGGAGGTAAAGATTCTGCGGCATCAAGATATATTTATACCAAACCAAAT-AAAATATTA 163216
|| |||||||||| | || | |||||||||| || || ||| ||| || ||
Sbjct 37145 CTGGTGGTAAAGATTTCTCCGCTGCGAGATATATTTTCACAGAATTGAATGAAATTACTA 37204
Query 163217 AAATATATATTTAGAGAAGAAGATGACCCTATTTTA-AATTATACTGTTGAGGGTGAAC- 163274
|| | ||||| | | ||||| || ||| || |||||| | || | |||||
Sbjct 37205 GAA-AGATATTCAATCCATTGGATGATCC-ATTGTATAATTATGTTCAAGATGATGAACA 37262
Query 163275 --CTGTTCA-------TTTTATC--CCAGTGATTCCATTAATTTTAATTAATGGTTCTAT 163323
||||| | | |||| || || | ||| | |||||| | |||||| ||
Sbjct 37263 AACTGTTGAACCAGAGTGGTATCTTCCTGTTTTGCCAATGATTTTAGTCAATGGTGCTGA 37322
Query 163324 TGGTATTGGAACAGGATGGTCATGTTTTATCCCTCAATATAATCCT 163369
|||||||| || || |||||| | ||| ||| |||||||||
Sbjct 37323 AGGTATTGGTACTGGTTGGTCAACTAATATTCCTTCTTATAATCCT 37368
>seq241
Length=30804
Score = 93.3 bits (102), Expect = 5e-14
Identities = 125/168 (74%), Gaps = 7/168 (4%)
Strand=Plus/Plus
Query 51875 TGATGATGTACTATTA--AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTT 51932
||||| ||| ||||| ||| | |||||||| | ||||||||||||||| || |
Sbjct 9480 TGATGTTGT--TATTATGAATCGTCAACCAACTTTGCATAAAGCTTCTATGATGGGTCAT 9537
Query 51933 AAAGTTAAAATTCAACCAG-TAAAAACA-TTTAAAATGA-ATTTGGCTATGACTAAAGCA 51989
||||| | | || ||||| | |||| | ||||| || | ||| |||| ||| ||
Sbjct 9538 AAAGTCAGAGTTTTACCAGGTGAAAAGACTTTAAGATTACATTATGCTAATACTGGTGCT 9597
Query 51990 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAA 52037
|||||||| ||||||||||| |||||||||||| | ||| | || |||
Sbjct 9598 TATAATGCCGATTTTGATGGTGATGAAATGAATATGCATTTCCCACAA 9645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635174686122760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |