Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq259 125 9e-24
seq132 125 9e-24
>seq259
Length=87679
Score = 125 bits (138), Expect = 9e-24
Identities = 332/501 (66%), Gaps = 32/501 (6%)
Strand=Plus/Plus
Query 180392 ACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATAATGAAAGGT 180451
|| || || ||| | ||| |||| ||| || | |||||||||||| | || ||
Sbjct 62900 ACTACCAAGAAAGTCTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGA 62959
Query 180452 TTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCG 180511
| ||| || |||| | |||| | | ||||||||| | ||| | | |||||| ||
Sbjct 62960 TCAACCGATGCTAAAATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCT 63019
Query 180512 CGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGACCA 180568
||| ||||||||||| | ||||| |||| ||| ||||||||||| ||||||
Sbjct 63020 CGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGTCG---TGAAGGTGATTTGGGACCA 63076
Query 180569 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTAT 180628
||||||| || ||||||||||| || ||| |||||| || |||||| | | |||
Sbjct 63077 GTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTAT 63136
Query 180629 ATCGGGCAAGGTATAGACCAATTAAGCCAAGTTAT-----AGAAACTATAAAAAATAATC 180683
| || |||||| || || || |||| ||| |||| || ||| | | |
Sbjct 63137 ACTGGACAAGGTTATGATCAGTT---GCAAGATATCATTAAGAA---ATTAAAGACCAAC 63190
Query 180684 CCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCT 180742
|| ||| ||||||||||||| | |||||| | || | || | ||||||
Sbjct 63191 CCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCT 63250
Query 180743 CTTCCACCATGTCA-CTGTTTGGTACAATTTTATGTT--------AGAAA----TAAAAT 180789
| || |||||||| | ||| || ||||| |||||| ||||| ||||
Sbjct 63251 TTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTCCCAGAAAACGCTAAACC 63309
Query 180790 TTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAA 180849
| | ||| || ||||||||| |||||| ||| | || || || || || | ||
Sbjct 63310 TAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAA 63369
Query 180850 TATTGCTTTCTATTCATTTTT 180870
||||||| |||| | || ||
Sbjct 63370 CATTGCTTCCTATGCTTTGTT 63390
>seq132
Length=62843
Score = 125 bits (138), Expect = 9e-24
Identities = 332/501 (66%), Gaps = 32/501 (6%)
Strand=Plus/Minus
Query 180392 ACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATAATGAAAGGT 180451
|| || || ||| | ||| |||| ||| || | |||||||||||| | || ||
Sbjct 30929 ACTACCAAGAAAGTCTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGA 30870
Query 180452 TTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCG 180511
| ||| || |||| | |||| | | ||||||||| | ||| | | |||||| ||
Sbjct 30869 TCAACCGATGCTAAAATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCT 30810
Query 180512 CGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGACCA 180568
||| ||||||||||| | ||||| |||| ||| ||||||||||| ||||||
Sbjct 30809 CGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGTCGT---GAAGGTGATTTGGGACCA 30753
Query 180569 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTAT 180628
||||||| || ||||||||||| || ||| |||||| || |||||| | | |||
Sbjct 30752 GTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTAT 30693
Query 180629 ATCGGGCAAGGTATAGACCAATTAAGCCAAGTTAT-----AGAAACTATAAAAAATAATC 180683
| || |||||| || || || |||| ||| |||| || ||| | | |
Sbjct 30692 ACTGGACAAGGTTATGATCAGTT---GCAAGATATCATTAAGAA---ATTAAAGACCAAC 30639
Query 180684 CCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCT 180742
|| ||| ||||||||||||| | |||||| | || | || | ||||||
Sbjct 30638 CCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCT 30579
Query 180743 CTTCCACCATGTCA-CTGTTTGGTACAATTTTATGTT--------AGAAA----TAAAAT 180789
| || |||||||| | ||| || ||||| |||||| ||||| ||||
Sbjct 30578 TTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTCCCAGAAAACGCTAAACC 30520
Query 180790 TTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAA 180849
| | ||| || ||||||||| |||||| ||| | || || || || || | ||
Sbjct 30519 TAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAA 30460
Query 180850 TATTGCTTTCTATTCATTTTT 180870
||||||| |||| | || ||
Sbjct 30459 CATTGCTTCCTATGCTTTGTT 30439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655276993903000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |