Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq259 125 9e-24 seq132 125 9e-24 >seq259 Length=87679 Score = 125 bits (138), Expect = 9e-24 Identities = 332/501 (66%), Gaps = 32/501 (6%) Strand=Plus/Plus Query 180392 ACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATAATGAAAGGT 180451 || || || ||| | ||| |||| ||| || | |||||||||||| | || || Sbjct 62900 ACTACCAAGAAAGTCTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGA 62959 Query 180452 TTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCG 180511 | ||| || |||| | |||| | | ||||||||| | ||| | | |||||| || Sbjct 62960 TCAACCGATGCTAAAATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCT 63019 Query 180512 CGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGACCA 180568 ||| ||||||||||| | ||||| |||| ||| ||||||||||| |||||| Sbjct 63020 CGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGTCG---TGAAGGTGATTTGGGACCA 63076 Query 180569 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTAT 180628 ||||||| || ||||||||||| || ||| |||||| || |||||| | | ||| Sbjct 63077 GTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTAT 63136 Query 180629 ATCGGGCAAGGTATAGACCAATTAAGCCAAGTTAT-----AGAAACTATAAAAAATAATC 180683 | || |||||| || || || |||| ||| |||| || ||| | | | Sbjct 63137 ACTGGACAAGGTTATGATCAGTT---GCAAGATATCATTAAGAA---ATTAAAGACCAAC 63190 Query 180684 CCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCT 180742 || ||| ||||||||||||| | |||||| | || | || | |||||| Sbjct 63191 CCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCT 63250 Query 180743 CTTCCACCATGTCA-CTGTTTGGTACAATTTTATGTT--------AGAAA----TAAAAT 180789 | || |||||||| | ||| || ||||| |||||| ||||| |||| Sbjct 63251 TTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTCCCAGAAAACGCTAAACC 63309 Query 180790 TTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAA 180849 | | ||| || ||||||||| |||||| ||| | || || || || || | || Sbjct 63310 TAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAA 63369 Query 180850 TATTGCTTTCTATTCATTTTT 180870 ||||||| |||| | || || Sbjct 63370 CATTGCTTCCTATGCTTTGTT 63390 >seq132 Length=62843 Score = 125 bits (138), Expect = 9e-24 Identities = 332/501 (66%), Gaps = 32/501 (6%) Strand=Plus/Minus Query 180392 ACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATAATGAAAGGT 180451 || || || ||| | ||| |||| ||| || | |||||||||||| | || || Sbjct 30929 ACTACCAAGAAAGTCTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGA 30870 Query 180452 TTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCG 180511 | ||| || |||| | |||| | | ||||||||| | ||| | | |||||| || Sbjct 30869 TCAACCGATGCTAAAATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCT 30810 Query 180512 CGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGACCA 180568 ||| ||||||||||| | ||||| |||| ||| ||||||||||| |||||| Sbjct 30809 CGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGTCGT---GAAGGTGATTTGGGACCA 30753 Query 180569 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTAT 180628 ||||||| || ||||||||||| || ||| |||||| || |||||| | | ||| Sbjct 30752 GTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTAT 30693 Query 180629 ATCGGGCAAGGTATAGACCAATTAAGCCAAGTTAT-----AGAAACTATAAAAAATAATC 180683 | || |||||| || || || |||| ||| |||| || ||| | | | Sbjct 30692 ACTGGACAAGGTTATGATCAGTT---GCAAGATATCATTAAGAA---ATTAAAGACCAAC 30639 Query 180684 CCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCT 180742 || ||| ||||||||||||| | |||||| | || | || | |||||| Sbjct 30638 CCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCT 30579 Query 180743 CTTCCACCATGTCA-CTGTTTGGTACAATTTTATGTT--------AGAAA----TAAAAT 180789 | || |||||||| | ||| || ||||| |||||| ||||| |||| Sbjct 30578 TTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTCCCAGAAAACGCTAAACC 30520 Query 180790 TTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAA 180849 | | ||| || ||||||||| |||||| ||| | || || || || || | || Sbjct 30519 TAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAA 30460 Query 180850 TATTGCTTTCTATTCATTTTT 180870 ||||||| |||| | || || Sbjct 30459 CATTGCTTCCTATGCTTTGTT 30439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655276993903000