Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq259 159 4e-34
seq132 159 4e-34
seq241 93.3 5e-14
seq311 82.4 1e-10
>seq259
Length=87679
Score = 159 bits (176), Expect = 4e-34
Identities = 424/640 (66%), Gaps = 26/640 (4%)
Strand=Plus/Plus
Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593
||| ||| |||||||||| | || || | ||||| | ||||| || ||| ||
Sbjct 62857 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 62913
Query 171594 ATATACTAA---TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650
| | |||| |||| || | ||| | |||||| ||||| || ||||| ||| | ||
Sbjct 62914 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 62973
Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710
| |||| | | |||||||||| ||||| | | |||||| |||||||| ||||||||
Sbjct 62974 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 63033
Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770
| | || || ||| | | ||||||||||| || ||| ||||||| || |||||
Sbjct 63034 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 63093
Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830
|||||| || ||| |||||| || ||| || | ||||| || |||||||| ||
Sbjct 63094 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 63153
Query 171831 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 171888
|| || ||| | | ||||| | ||| | | ||||||| | |||||| || |
Sbjct 63154 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 63211
Query 171889 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCA-CACTTT 171947
|| | |||||| ||| | |||||||||||| | | ||||| || || ||||
Sbjct 63212 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 63271
Query 171948 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 171995
| ||||| ||||| ||||||| ||| | | ||| ||| || ||
Sbjct 63272 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 63330
Query 171996 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055
||| ||||| |||| | || ||||| || |||| || |||| | ||| | || ||
Sbjct 63331 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 63390
Query 172056 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172114
|| || || | |||| || | | || | |||||||||||| | |
Sbjct 63391 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 63449
Query 172115 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172154
| |||| ||||||||||| ||||||| || |||| ||
Sbjct 63450 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 63489
>seq132
Length=62843
Score = 159 bits (176), Expect = 4e-34
Identities = 424/640 (66%), Gaps = 26/640 (4%)
Strand=Plus/Minus
Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593
||| ||| |||||||||| | || || | ||||| | ||||| || ||| ||
Sbjct 30972 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 30916
Query 171594 ATATACTAA---TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650
| | |||| |||| || | ||| | |||||| ||||| || ||||| ||| | ||
Sbjct 30915 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 30856
Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710
| |||| | | |||||||||| ||||| | | |||||| |||||||| ||||||||
Sbjct 30855 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 30796
Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770
| | || || ||| | | ||||||||||| || ||| ||||||| || |||||
Sbjct 30795 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 30736
Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830
|||||| || ||| |||||| || ||| || | ||||| || |||||||| ||
Sbjct 30735 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 30676
Query 171831 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 171888
|| || ||| | | ||||| | ||| | | ||||||| | |||||| || |
Sbjct 30675 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 30618
Query 171889 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCA-CACTTT 171947
|| | |||||| ||| | |||||||||||| | | ||||| || || ||||
Sbjct 30617 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 30558
Query 171948 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 171995
| ||||| ||||| ||||||| ||| | | ||| ||| || ||
Sbjct 30557 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 30499
Query 171996 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055
||| ||||| |||| | || ||||| || |||| || |||| | ||| | || ||
Sbjct 30498 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 30439
Query 172056 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172114
|| || || | |||| || | | || | |||||||||||| | |
Sbjct 30438 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 30380
Query 172115 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172154
| |||| ||||||||||| ||||||| || |||| ||
Sbjct 30379 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 30340
>seq241
Length=30804
Score = 93.3 bits (102), Expect = 5e-14
Identities = 125/168 (74%), Gaps = 7/168 (4%)
Strand=Plus/Plus
Query 50325 TGATGATGTACTATTA--AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTT 50382
||||| ||| ||||| ||| | |||||||| | ||||||||||||||| || |
Sbjct 9480 TGATGTTGT--TATTATGAATCGTCAACCAACTTTGCATAAAGCTTCTATGATGGGTCAT 9537
Query 50383 AAAGTTAAAATTCAACCAG-TAAAAACA-TTTAAAATGAATTTA-GCTATGACTAAAGCA 50439
||||| | | || ||||| | |||| | ||||| || | ||| |||| ||| ||
Sbjct 9538 AAAGTCAGAGTTTTACCAGGTGAAAAGACTTTAAGATTACATTATGCTAATACTGGTGCT 9597
Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAA 50487
|||||||| ||||||||||| |||||||||||| | ||| | || |||
Sbjct 9598 TATAATGCCGATTTTGATGGTGATGAAATGAATATGCATTTCCCACAA 9645
>seq311
Length=49457
Score = 82.4 bits (90), Expect = 1e-10
Identities = 139/198 (70%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219
||||| ||||||||||| ||||||||| ||| | || | |||| | ||||||||
Sbjct 36985 ATTAAGGTTGCTCAATTGGCTGGGTATGTAAGTGAAAACACTGGTTATCATCATGGTGAG 37044
Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT- 165278
||| || | | || || ||| ||| || ||| | ||||||||| | ||||||||
Sbjct 37045 CAATCATTGGTTCAGACCATCATTGGGTTGGCACAAAACTTTGTTGGTTCTAATAATATC 37104
Query 165279 AGCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337
| ||| ||| |||| ||||| ||||||| ||| | || ||||||||||
Sbjct 37105 AACAT--CTTAAAACCAAATGGTTCCTTTGGTAGTAGAGCCGCTGGTGGTAAAGATTTCT 37162
Query 165338 CGGCATCAAGATATATTT 165355
| || | ||||||||||
Sbjct 37163 CCGCTGCGAGATATATTT 37180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628528316613120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |