Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq259 159 4e-34 seq132 159 4e-34 seq241 93.3 5e-14 seq311 82.4 1e-10 >seq259 Length=87679 Score = 159 bits (176), Expect = 4e-34 Identities = 424/640 (66%), Gaps = 26/640 (4%) Strand=Plus/Plus Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593 ||| ||| |||||||||| | || || | ||||| | ||||| || ||| || Sbjct 62857 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 62913 Query 171594 ATATACTAA---TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650 | | |||| |||| || | ||| | |||||| ||||| || ||||| ||| | || Sbjct 62914 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 62973 Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710 | |||| | | |||||||||| ||||| | | |||||| |||||||| |||||||| Sbjct 62974 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 63033 Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770 | | || || ||| | | ||||||||||| || ||| ||||||| || ||||| Sbjct 63034 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 63093 Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830 |||||| || ||| |||||| || ||| || | ||||| || |||||||| || Sbjct 63094 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 63153 Query 171831 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 171888 || || ||| | | ||||| | ||| | | ||||||| | |||||| || | Sbjct 63154 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 63211 Query 171889 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCA-CACTTT 171947 || | |||||| ||| | |||||||||||| | | ||||| || || |||| Sbjct 63212 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 63271 Query 171948 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 171995 | ||||| ||||| ||||||| ||| | | ||| ||| || || Sbjct 63272 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 63330 Query 171996 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055 ||| ||||| |||| | || ||||| || |||| || |||| | ||| | || || Sbjct 63331 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 63390 Query 172056 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172114 || || || | |||| || | | || | |||||||||||| | | Sbjct 63391 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 63449 Query 172115 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172154 | |||| ||||||||||| ||||||| || |||| || Sbjct 63450 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 63489 >seq132 Length=62843 Score = 159 bits (176), Expect = 4e-34 Identities = 424/640 (66%), Gaps = 26/640 (4%) Strand=Plus/Minus Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593 ||| ||| |||||||||| | || || | ||||| | ||||| || ||| || Sbjct 30972 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 30916 Query 171594 ATATACTAA---TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650 | | |||| |||| || | ||| | |||||| ||||| || ||||| ||| | || Sbjct 30915 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 30856 Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710 | |||| | | |||||||||| ||||| | | |||||| |||||||| |||||||| Sbjct 30855 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 30796 Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770 | | || || ||| | | ||||||||||| || ||| ||||||| || ||||| Sbjct 30795 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 30736 Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830 |||||| || ||| |||||| || ||| || | ||||| || |||||||| || Sbjct 30735 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 30676 Query 171831 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 171888 || || ||| | | ||||| | ||| | | ||||||| | |||||| || | Sbjct 30675 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGACCAACCCATATGATAGAAGAATAATC 30618 Query 171889 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCA-CACTTT 171947 || | |||||| ||| | |||||||||||| | | ||||| || || |||| Sbjct 30617 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 30558 Query 171948 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 171995 | ||||| ||||| ||||||| ||| | | ||| ||| || || Sbjct 30557 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 30499 Query 171996 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055 ||| ||||| |||| | || ||||| || |||| || |||| | ||| | || || Sbjct 30498 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 30439 Query 172056 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172114 || || || | |||| || | | || | |||||||||||| | | Sbjct 30438 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 30380 Query 172115 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172154 | |||| ||||||||||| ||||||| || |||| || Sbjct 30379 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 30340 >seq241 Length=30804 Score = 93.3 bits (102), Expect = 5e-14 Identities = 125/168 (74%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 50325 TGATGATGTACTATTA--AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTT 50382 ||||| ||| ||||| ||| | |||||||| | ||||||||||||||| || | Sbjct 9480 TGATGTTGT--TATTATGAATCGTCAACCAACTTTGCATAAAGCTTCTATGATGGGTCAT 9537 Query 50383 AAAGTTAAAATTCAACCAG-TAAAAACA-TTTAAAATGAATTTA-GCTATGACTAAAGCA 50439 ||||| | | || ||||| | |||| | ||||| || | ||| |||| ||| || Sbjct 9538 AAAGTCAGAGTTTTACCAGGTGAAAAGACTTTAAGATTACATTATGCTAATACTGGTGCT 9597 Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAA 50487 |||||||| ||||||||||| |||||||||||| | ||| | || ||| Sbjct 9598 TATAATGCCGATTTTGATGGTGATGAAATGAATATGCATTTCCCACAA 9645 >seq311 Length=49457 Score = 82.4 bits (90), Expect = 1e-10 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 ||||| ||||||||||| ||||||||| ||| | || | |||| | |||||||| Sbjct 36985 ATTAAGGTTGCTCAATTGGCTGGGTATGTAAGTGAAAACACTGGTTATCATCATGGTGAG 37044 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT- 165278 ||| || | | || || ||| ||| || ||| | ||||||||| | |||||||| Sbjct 37045 CAATCATTGGTTCAGACCATCATTGGGTTGGCACAAAACTTTGTTGGTTCTAATAATATC 37104 Query 165279 AGCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337 | ||| ||| |||| ||||| ||||||| ||| | || |||||||||| Sbjct 37105 AACAT--CTTAAAACCAAATGGTTCCTTTGGTAGTAGAGCCGCTGGTGGTAAAGATTTCT 37162 Query 165338 CGGCATCAAGATATATTT 165355 | || | |||||||||| Sbjct 37163 CCGCTGCGAGATATATTT 37180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628528316613120