Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq106 104 2e-17
seq297 98.7 1e-15
seq307 86.0 6e-12
seq250 86.0 6e-12
>seq106
Length=24021
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| || || || | |||||||| ||||| |||||||| || |
Sbjct 4145 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 4204
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || ||||| | ||||||||||||| |||||| | ||| ||||| || ||
Sbjct 4205 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 4264
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||||||||| ||||| ||| | | || | ||||| | || ||| |||
Sbjct 4265 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACT 4324
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | || || || || || || || ||||| ||||||||
Sbjct 4325 TCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 4371
>seq297
Length=71103
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| || || || | |||||||||||||| |||||||| || |
Sbjct 34795 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 34736
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || |||||| | |||||||||||| | |||| | ||| ||||| || ||
Sbjct 34735 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 34676
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| |||||||| || ||||| ||| | | || | ||||| | | ||| |||
Sbjct 34675 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 34616
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | ||| | || || || || || || || ||||| ||||||||
Sbjct 34615 TCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 34569
>seq307
Length=48190
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561
||||| || || | |||||||| | |||||| || ||| | || || | || |||||
Sbjct 39767 GAAGCTGTTGATGTTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTCTTTATTGGGT 39826
Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621
|||||| ||| ||||||| | || |||| | |||||| || ||||| || ||
Sbjct 39827 ATGAACTGTGACTTGATGTGTCAATATGTTGAATATGTTGCTGATAGATTATTATTTGCC 39886
Query 50622 CTGGG--ACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50679
|||| |||| |||| || |||| |||||| || || ||| | || || |
Sbjct 39887 TTGGGTAACAA--GAAAGTTTACAATGTTACTAACCCATTCGATTTCATGGAAAATATTT 39944
Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGAAA 50709
| |||| || ||||| |||||||||||||
Sbjct 39945 CCTTGGCTGGTAAAACCAACTTTTTCGAAA 39974
>seq250
Length=32566
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561
||||| || || | |||||||| | |||||| || ||| | || || | || |||||
Sbjct 29253 GAAGCTGTTGATGTTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTCTTTATTGGGT 29312
Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621
|||||| ||| ||||||| | || |||| | |||||| || ||||| || ||
Sbjct 29313 ATGAACTGTGACTTGATGTGTCAATATGTTGAATATGTTGCTGATAGATTATTATTTGCC 29372
Query 50622 CTGGG--ACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50679
|||| |||| |||| || |||| |||||| || || ||| | || || |
Sbjct 29373 TTGGGTAACAA--GAAAGTTTACAATGTTACTAACCCATTCGATTTCATGGAAAATATTT 29430
Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGAAA 50709
| |||| || ||||| |||||||||||||
Sbjct 29431 CCTTGGCTGGTAAAACCAACTTTTTCGAAA 29460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488541758804400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |