Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq297 192 1e-43 seq106 168 1e-36 seq216 109 1e-18 >seq297 Length=71103 Score = 192 bits (212), Expect = 1e-43 Identities = 186/239 (78%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||||| |||||||||||| || || || || ||||| Sbjct 34796 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGA 34737 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | ||||||||||||||| |||||| ||||| || || | ||||||||||||||| || Sbjct 34736 CAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGG 34677 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| |||||||| || || | ||| || || ||||| || ||| || ||| || Sbjct 34676 AATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAAC 34617 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTT 82821 ||||||||| || || || || || || ||||| || || || |||||| | |||| || Sbjct 34616 TTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTGTGATATGTT 34558 >seq106 Length=24021 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||||| |||||||| || || || || || ||||| Sbjct 4144 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 4203 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | ||||||| ||||| | |||||| ||||||||||| | ||||||||||||||| || Sbjct 4204 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 4263 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||| || || | ||| ||||| ||||| || || | ||| || Sbjct 4264 AATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGAC 4323 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || || || || || || ||||| || || || ||||| Sbjct 4324 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 4371 >seq216 Length=16887 Score = 109 bits (120), Expect = 1e-18 Identities = 138/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 143935 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCT 143994 ||| | ||| ||||||| ||||| ||||| |||||||||| || || ||||| || | Sbjct 10374 TTCGTGTTTGGACAGATATTGATGAATGGACAACTTGGAAAACAAGACTGGATCCTGTTT 10433 Query 143995 TGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTA-TAGCGCCCTTAACAGCAAAT 144053 | ||||| ||| | || |||||||||||| | |||||| | || ||||| |||||| Sbjct 10434 TACATATTGAATTAAGAAGATGGGCTGAT-ATCTTATTAGTTTGTCCATTAACTGCAAAT 10492 Query 144054 ACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCC 144113 || || || ||||| | |||||||| ||||||||| |||| | | | ||||| Sbjct 10493 ACTTTGGCTAAAATTTCTTTAGGTATATGTGATAATTTATTAACTAATGTTATCAGAGCT 10552 Query 144114 TGGGATA 144120 ||| ||| Sbjct 10553 TGGAATA 10559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822583264413