Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq297 192 1e-43
seq106 168 1e-36
seq216 109 1e-18
>seq297
Length=71103
Score = 192 bits (212), Expect = 1e-43
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| |||||||||||| || || || || |||||
Sbjct 34796 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGA 34737
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| ||||||||||||||| |||||| ||||| || || | ||||||||||||||| ||
Sbjct 34736 CAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGG 34677
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| |||||||| || || | ||| || || ||||| || ||| || ||| ||
Sbjct 34676 AATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAAC 34617
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTT 82821
||||||||| || || || || || || ||||| || || || |||||| | |||| ||
Sbjct 34616 TTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTGTGATATGTT 34558
>seq106
Length=24021
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| |||||||| || || || || || |||||
Sbjct 4144 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 4203
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | |||||| ||||||||||| | ||||||||||||||| ||
Sbjct 4204 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 4263
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || ||||| || || | ||| ||||| ||||| || || | ||| ||
Sbjct 4264 AATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGAC 4323
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| || || || || || || || ||||| || || || |||||
Sbjct 4324 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 4371
>seq216
Length=16887
Score = 109 bits (120), Expect = 1e-18
Identities = 138/187 (74%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 143935 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCT 143994
||| | ||| ||||||| ||||| ||||| |||||||||| || || ||||| || |
Sbjct 10374 TTCGTGTTTGGACAGATATTGATGAATGGACAACTTGGAAAACAAGACTGGATCCTGTTT 10433
Query 143995 TGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTA-TAGCGCCCTTAACAGCAAAT 144053
| ||||| ||| | || |||||||||||| | |||||| | || ||||| ||||||
Sbjct 10434 TACATATTGAATTAAGAAGATGGGCTGAT-ATCTTATTAGTTTGTCCATTAACTGCAAAT 10492
Query 144054 ACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCC 144113
|| || || ||||| | |||||||| ||||||||| |||| | | | |||||
Sbjct 10493 ACTTTGGCTAAAATTTCTTTAGGTATATGTGATAATTTATTAACTAATGTTATCAGAGCT 10552
Query 144114 TGGGATA 144120
||| |||
Sbjct 10553 TGGAATA 10559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981822583264413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |