Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq307 259 4e-64
seq250 259 4e-64
seq124 188 6e-43
seq166 183 2e-41
>seq307
Length=48190
Score = 259 bits (286), Expect = 4e-64
Identities = 584/866 (67%), Gaps = 35/866 (4%)
Strand=Plus/Plus
Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766
||||||||||| |||||||||| || ||| | | || |||||||| | || || || |
Sbjct 39126 TGTTTCCAATTAAATATCATGAAATCTGGAATTTCTATAAAAAAGCCGAAGCCTCCTTCT 39185
Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC--ATTAAAACC 43824
|||| |||||||||||||| | |||||| || | |||||| | | |||
Sbjct 39186 GGACTTGTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAACAACAAATTAAATG 39245
Query 43825 ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883
|||| |||||| ||||| | ||| ||||| || ||||| ||||| || || || |
Sbjct 39246 ACAATGAAAAATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTATTG 39305
Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTT 43943
| |||||| ||| || ||| | ||||| ||| | |||||||| || |
Sbjct 39306 TTGGTGAAAACTTGATTGAAAACTTTTCTGCCGAAGTCCAACTGCCAGAAGCTAAATCAT 39365
Query 43944 TTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAG 44003
| ||||| || ||||| || ||||| |||||||| |||||||| | | | || |
Sbjct 39366 TCTATGGTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAATTG 39425
Query 44004 ATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAA-CAG 44060
| || || | ||||| ||| |||||| || ||||||||||| || |||| ||
Sbjct 39426 AAACTTATGTTAAAGACC--CACAAGAAGCTGATTTCTTGTTTAATGCCATTGAAAACAT 39483
Query 44061 TACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTT 44120
| | || |||| | ||||| || |||||| | |||||||| | || ||| |||
Sbjct 39484 TCCATGT-ATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGATGCTT 39542
Query 44121 T---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGT 44177
| || ||| || | || || ||||| | | | ||||| |||||||| || || |
Sbjct 39543 TATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCAT 39602
Query 44178 TTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATG 44237
|||| | || || ||||| || || ||||||||||||| || ||||| || || ||||
Sbjct 39603 TTGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATG 39662
Query 44238 AGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT--------ACT 44289
| || || || | |||||||| |||||| ||||||||||| ||||| |||
Sbjct 39663 AATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCACT 39722
Query 44290 TGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGC 44349
|| | | |||| || || || | | || | | ||| |||| || ||
Sbjct 39723 TGCAACAC----AGACCAT----CTCCA---GAAATTGTTGAAAAGATTATTGTTGAAGC 39771
Query 44350 AGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA 44409
|| | | ||| |||||| | | || || | || || |||| | || |||||
Sbjct 39772 TGTTGATGTTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTCTTTATTGGGTATGAA 39831
Query 44410 -TG-AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| || |||||| |||||| ||||||| |||| ||| | ||| | || | ||
Sbjct 39832 CTGTGAC--TTGATGTGTCAATATGTTGAATATGTTGCTGATAGATTATTATTTGCCTTG 39889
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| || | ||| ||||| || ||||| |||||||||||||| |||
Sbjct 39890 GGTAACAAGAAAGTTTACAATGTTACTAACCCATTCGATTTCATGGAAAATATTTCCTTG 39949
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| |||||||| |||||
Sbjct 39950 GCTGGTAAAACCAACTTTTTCGAAAA 39975
>seq250
Length=32566
Score = 259 bits (286), Expect = 4e-64
Identities = 584/866 (67%), Gaps = 35/866 (4%)
Strand=Plus/Plus
Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766
||||||||||| |||||||||| || ||| | | || |||||||| | || || || |
Sbjct 28612 TGTTTCCAATTAAATATCATGAAATCTGGAATTTCTATAAAAAAGCCGAAGCCTCCTTCT 28671
Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC--ATTAAAACC 43824
|||| |||||||||||||| | |||||| || | |||||| | | |||
Sbjct 28672 GGACTTGTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAACAACAAATTAAATG 28731
Query 43825 ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883
|||| |||||| ||||| | ||| ||||| || ||||| ||||| || || || |
Sbjct 28732 ACAATGAAAAATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTATTG 28791
Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTT 43943
| |||||| ||| || ||| | ||||| ||| | |||||||| || |
Sbjct 28792 TTGGTGAAAACTTGATTGAAAACTTTTCTGCTGAAGTCCAACTGCCAGAAGCTAAATCAT 28851
Query 43944 TTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAG 44003
| ||||| || ||||| || ||||| |||||||| |||||||| | | | || |
Sbjct 28852 TCTATGGTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAATTG 28911
Query 44004 ATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAA-CAG 44060
| || || | ||||| ||| |||||| || ||||||||||| || |||| ||
Sbjct 28912 AAACTTATGTTAAAGACC--CACAAGAAGCTGATTTCTTGTTTAATGCCATTGAAAACAT 28969
Query 44061 TACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTT 44120
| | || |||| | ||||| || |||||| | |||||||| | || ||| |||
Sbjct 28970 TCCATGT-ATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGATGCTT 29028
Query 44121 T---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGT 44177
| || ||| || | || || ||||| | | | ||||| |||||||| || || |
Sbjct 29029 TATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCAT 29088
Query 44178 TTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATG 44237
|||| | || || ||||| || || ||||||||||||| || ||||| || || ||||
Sbjct 29089 TTGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATG 29148
Query 44238 AGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT--------ACT 44289
| || || || | |||||||| |||||| ||||||||||| ||||| |||
Sbjct 29149 AATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCACT 29208
Query 44290 TGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGC 44349
|| | | |||| || || || | | || | | ||| |||| || ||
Sbjct 29209 TGCAACAC----AGACCAT----CTCCA---GAAATTGTTGAAAAGATTATTGTTGAAGC 29257
Query 44350 AGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA 44409
|| | | ||| |||||| | | || || | || || |||| | || |||||
Sbjct 29258 TGTTGATGTTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTCTTTATTGGGTATGAA 29317
Query 44410 -TG-AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| || |||||| |||||| ||||||| |||| ||| | ||| | || | ||
Sbjct 29318 CTGTGAC--TTGATGTGTCAATATGTTGAATATGTTGCTGATAGATTATTATTTGCCTTG 29375
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| || | ||| ||||| || ||||| |||||||||||||| |||
Sbjct 29376 GGTAACAAGAAAGTTTACAATGTTACTAACCCATTCGATTTCATGGAAAATATTTCCTTG 29435
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| |||||||| |||||
Sbjct 29436 GCTGGTAAAACCAACTTTTTCGAAAA 29461
>seq124
Length=102737
Score = 188 bits (208), Expect = 6e-43
Identities = 420/617 (68%), Gaps = 15/617 (2%)
Strand=Plus/Minus
Query 43706 GTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTT 43765
||||||||||| |||||| ||| || ||| | ||||| ||| | || ||||||
Sbjct 21959 GTGTTTCCAATAAAATATCCTGAAATTTGGACTTTCTACAAGAAATCTGTTGCATCATTT 21900
Query 43766 TGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGG---ATTGCATTAAAA 43822
||||||||||||||| |||| |||| |||||| || | ||||| | | | | ||
Sbjct 21899 TGGACAGCAGAAGAAATTGACTTGAGTAAAGATTTTGATGATTGGGAAAATAAAATGAAT 21840
Query 43823 CCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATA 43882
| | |||| | ||| || || ||||| || ||||||||||| || || |||
Sbjct 21839 AAAGATGAAAGATTTTTCATCTCAAGAGTTTTAGCCTTTTTTGCTGCATCAGATGGTATA 21780
Query 43883 GTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGC-ACGAT 43940
||||||||||| |||||| | |||| | |||||| || | || ||||| | | |
Sbjct 21779 GTCAATGAAAACTTGGTTGAAAACTTTTGTACT-GAAGTTAAACTTCCTGAAGCCAAGCT 21721
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
| ||| | || || || || |||||||| ||||| |||| || ||| | |
Sbjct 21720 GGTTT-ACAAATTCCAGATCATGATGGAAAATATCCATTCAGAAACATATTCCCTTTTAA 21662
Query 44001 TAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGA-AACA 44059
| || || ||| |||| ||| | ||| || ||||| || || || || || |
Sbjct 21661 TTGAAACCTACTTCAAGGATCCTAAGGAGGCCGATTTCTTGTTCAACGCCATTGACAATA 21602
Query 44060 GTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATA-AATTCAAATGATTC 44118
|| | | ||| | |||||||| ||||| ||| |||||| || | || | |
Sbjct 21601 TTAAATAC-ATTGGTGAAAAAGCAGATTGGGCTATTAGATGGATTCAAGACGAAGAAGCC 21543
Query 44119 TT--TTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176
|| ||| |||| || | || || ||||| | | | |||||||||||||| || ||
Sbjct 21542 TTGTTTGCAGAAAGATTGGTGGCATTTGCTGCTATTGAAGGCATTTTCTTCAGTGGGTCA 21483
Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236
|| || |||| |||||||| || ||| |||| |||||||| || || || || ||||||
Sbjct 21482 TTCGCTTCCATTTTTTGGTTGAAAAAAAGAGGGTTGATGCCAGGTTTAACTTTCTCAAAT 21423
Query 44237 GAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATAT 44296
|| || || || | || ||||| | || ||||| |||||| || || || |||
Sbjct 21422 GAATTGATCTGTAGGGACGAAGGTATTCACACCGATTATGCTTGTTTACTATTTTCATA- 21364
Query 44297 CTAGGAGACGATAAGCC 44313
|| ||||| |||||||
Sbjct 21363 CTTGGAGA--ATAAGCC 21349
>seq166
Length=47476
Score = 183 bits (202), Expect = 2e-41
Identities = 326/473 (69%), Gaps = 21/473 (4%)
Strand=Plus/Plus
Query 19322 AACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAA 19381
|| |||||| | ||||||| | || | || | ||||| || |||||| ||| |
Sbjct 44995 AAAAATTGGATTATAAACATTGTAAAGGGTTGTTATTGTATGGTCCTCCGGGTACTGGTA 45054
Query 19382 AAACATTAATTGCGAGAGAACTTAGTAAATTACTTACA---AAACAACCTCCCAAAATTG 19438
|||| |||||||| ||| || | |||| | | | ||| ||||| |||||||
Sbjct 45055 AAACTTTAATTGCCAGAAAATTATCTAAAATGTTGAATGGTAAAGAACCT---AAAATTG 45111
Query 19439 TAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTT 19498
| |||||||| ||||| || | ||||||||| ||| || ||||||||| | || ||
Sbjct 45112 TTAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCTTCTGAAGAAAATATTCGTAATT 45171
Query 19499 TGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT---TTGCACA 19555
| || || || |||| |||| | ||| | | || | | | |||| || ||
Sbjct 45172 TATTCAAAGATGCCGAAGCAGAATATAAAT-TAAAAGGTGAAGA--TTCTGATTTACATG 45228
Query 19556 TTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGT---------G 19606
|||| || | ||||||||||| | | | || |||||||| || ||| |
Sbjct 45229 TTATTATTTTTGATGAATTGGATTCTGTTTTCAAACAAAGAGGGTCAGGTAAATCTGATG 45288
Query 19607 TAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACC 19666
|| ||| || ||| | ||||||||||||| | | || ||| | || |||||| | |
Sbjct 45289 GAACTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCCAAAATGGATGGTGTTGATC 45348
Query 19667 AACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCT 19726
|| |||||||||||||||||||||| ||||| ||| | |||| ||||| || | || |
Sbjct 45349 AATTGAATAATATTTTAGTTATTGGTATGACCAATCGTTTGGATTTAATTGATACTGCAT 45408
Query 19727 TATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAA 19779
| ||| |||| ||| | || ||||| | ||||||||| ||||| ||||||
Sbjct 45409 TGTTAAGACCAGGTAGATTTGAAATTCAAATCGAAATTTCTTTACCTGATGAA 45461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454222253835
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