Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq297 122 7e-23 seq325 107 2e-18 seq51 107 2e-18 >seq297 Length=71103 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| ||||| || || ||||| ||||||||||| |||||||| | Sbjct 34795 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 34736 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||| | |||||||| ||| |||| | | |||||||| || || Sbjct 34735 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 34676 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||| ||| ||| | | | || | ||||| | | ||||||| Sbjct 34675 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 34616 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| |||| ||| || || | ||| || || || |||||||| Sbjct 34615 TCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 34569 >seq325 Length=13538 Score = 107 bits (118), Expect = 2e-18 Identities = 423/654 (65%), Gaps = 21/654 (3%) Strand=Plus/Minus Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606 ||||| ||||||||||| ||||| | || || |||||||| || | || ||| | | Sbjct 12471 GATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGT 12412 Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCG-CAATCGA 130665 || |||||| | |||||||| | | || | || | | || ||| | ||| | Sbjct 12411 GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCT 12352 Query 130666 TTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC--AAT-CC 130722 | || || ||| ||||||| ||||| ||| | | | | ||| | | ||| || Sbjct 12351 TGGATCGA-ACCATTGTTGGAAATAAT---GTTACTCTTCATAGCATCATTCCAAATACC 12296 Query 130723 AAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGAC 130782 | | || | ||| || | ||| | ||| | ||||| || |||||||||| || Sbjct 12295 CAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTCACCAGCCAAAAC 12236 Query 130783 GCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTG 130842 | |||| |||||||||| ||| | ||||| || |||| ||||| || || ||||| Sbjct 12235 TCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTG 12176 Query 130843 TGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGT 130902 || |||| || || ||||| || || || | || || | | ||| || | | Sbjct 12175 TGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGC 12116 Query 130903 GATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACAT 130962 || ||| | ||||| |||||||||||||| || ||||| ||||||||| Sbjct 12115 CATCTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTTGGTTT---TCTGTTCCACAA 12059 Query 130963 ATCAAATTGTAGTATGCCTTTA----CTGGCGGGACTGGATTCGAACGATTCGTAGATTC 131018 |||||||||| || |||| | |||| | |||| | ||| ||| |||| | Sbjct 12058 GTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGT---AAC-TTTCATAGACAC 12003 Query 131019 CTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAA 131078 |||| || ||| | || | || ||| | ||| | | ||||||||||| | Sbjct 12002 CTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAATGGTTTCAAAGA 11943 Query 131079 TTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAG 131138 |||| | ||||||| | | |||| | || | || ||| ||| | ||||||| Sbjct 11942 TTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCAATCTCAAAGACATAAAAG 11883 Query 131139 CGTCTGCGAGACCCTGTA-TCCCAACGCCCACCGGTCTATGTTTTAAATTACAT 131191 | || || | ||| || | ||||| | | | ||||| ||| | | |||| || Sbjct 11882 CATCAGCTAAACCTTGAACACCCAAAG-CAATTGGTCTGTGTCTCATATTAGAT 11830 >seq51 Length=22326 Score = 107 bits (118), Expect = 2e-18 Identities = 423/654 (65%), Gaps = 21/654 (3%) Strand=Plus/Minus Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606 ||||| ||||||||||| ||||| | || || |||||||| || | || ||| | | Sbjct 20740 GATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGT 20681 Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCG-CAATCGA 130665 || |||||| | |||||||| | | || | || | | || ||| | ||| | Sbjct 20680 GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCT 20621 Query 130666 TTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC--AAT-CC 130722 | || || ||| ||||||| ||||| ||| | | | | ||| | | ||| || Sbjct 20620 TGGATCGA-ACCATTGTTGGAAATAAT---GTTACTCTTCATAGCATCATTCCAAATACC 20565 Query 130723 AAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGAC 130782 | | || | ||| || | ||| | ||| | ||||| || |||||||||| || Sbjct 20564 CAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTCACCAGCCAAAAC 20505 Query 130783 GCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTG 130842 | |||| |||||||||| ||| | ||||| || |||| ||||| || || ||||| Sbjct 20504 TCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTG 20445 Query 130843 TGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGT 130902 || |||| || || ||||| || || || | || || | | ||| || | | Sbjct 20444 TGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGC 20385 Query 130903 GATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACAT 130962 || ||| | ||||| |||||||||||||| || ||||| ||||||||| Sbjct 20384 CATCTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTTGGTTT---TCTGTTCCACAA 20328 Query 130963 ATCAAATTGTAGTATGCCTTTA----CTGGCGGGACTGGATTCGAACGATTCGTAGATTC 131018 |||||||||| || |||| | |||| | |||| | ||| ||| |||| | Sbjct 20327 GTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGT---AAC-TTTCATAGACAC 20272 Query 131019 CTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAA 131078 |||| || ||| | || | || ||| | ||| | | ||||||||||| | Sbjct 20271 CTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAATGGTTTCAAAGA 20212 Query 131079 TTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAG 131138 |||| | ||||||| | | |||| | || | || ||| ||| | ||||||| Sbjct 20211 TTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCAATCTCAAAGACATAAAAG 20152 Query 131139 CGTCTGCGAGACCCTGTA-TCCCAACGCCCACCGGTCTATGTTTTAAATTACAT 131191 | || || | ||| || | ||||| | | | ||||| ||| | | |||| || Sbjct 20151 CATCAGCTAAACCTTGAACACCCAAAG-CAATTGGTCTGTGTCTCATATTAGAT 20099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932499348104