Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq297 122 7e-23
seq325 107 2e-18
seq51 107 2e-18
>seq297
Length=71103
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || || ||||| ||||||||||| |||||||| |
Sbjct 34795 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 34736
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | |||||||| ||| |||| | | |||||||| || ||
Sbjct 34735 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 34676
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| |||||||| ||| ||| ||| | | | || | ||||| | | |||||||
Sbjct 34675 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 34616
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | ||| |||| ||| || || | ||| || || || ||||||||
Sbjct 34615 TCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 34569
>seq325
Length=13538
Score = 107 bits (118), Expect = 2e-18
Identities = 423/654 (65%), Gaps = 21/654 (3%)
Strand=Plus/Minus
Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606
||||| ||||||||||| ||||| | || || |||||||| || | || ||| | |
Sbjct 12471 GATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGT 12412
Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCG-CAATCGA 130665
|| |||||| | |||||||| | | || | || | | || ||| | ||| |
Sbjct 12411 GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCT 12352
Query 130666 TTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC--AAT-CC 130722
| || || ||| ||||||| ||||| ||| | | | | ||| | | ||| ||
Sbjct 12351 TGGATCGA-ACCATTGTTGGAAATAAT---GTTACTCTTCATAGCATCATTCCAAATACC 12296
Query 130723 AAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGAC 130782
| | || | ||| || | ||| | ||| | ||||| || |||||||||| ||
Sbjct 12295 CAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTCACCAGCCAAAAC 12236
Query 130783 GCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTG 130842
| |||| |||||||||| ||| | ||||| || |||| ||||| || || |||||
Sbjct 12235 TCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTG 12176
Query 130843 TGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGT 130902
|| |||| || || ||||| || || || | || || | | ||| || | |
Sbjct 12175 TGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGC 12116
Query 130903 GATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACAT 130962
|| ||| | ||||| |||||||||||||| || ||||| |||||||||
Sbjct 12115 CATCTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTTGGTTT---TCTGTTCCACAA 12059
Query 130963 ATCAAATTGTAGTATGCCTTTA----CTGGCGGGACTGGATTCGAACGATTCGTAGATTC 131018
|||||||||| || |||| | |||| | |||| | ||| ||| |||| |
Sbjct 12058 GTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGT---AAC-TTTCATAGACAC 12003
Query 131019 CTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAA 131078
|||| || ||| | || | || ||| | ||| | | ||||||||||| |
Sbjct 12002 CTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAATGGTTTCAAAGA 11943
Query 131079 TTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAG 131138
|||| | ||||||| | | |||| | || | || ||| ||| | |||||||
Sbjct 11942 TTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCAATCTCAAAGACATAAAAG 11883
Query 131139 CGTCTGCGAGACCCTGTA-TCCCAACGCCCACCGGTCTATGTTTTAAATTACAT 131191
| || || | ||| || | ||||| | | | ||||| ||| | | |||| ||
Sbjct 11882 CATCAGCTAAACCTTGAACACCCAAAG-CAATTGGTCTGTGTCTCATATTAGAT 11830
>seq51
Length=22326
Score = 107 bits (118), Expect = 2e-18
Identities = 423/654 (65%), Gaps = 21/654 (3%)
Strand=Plus/Minus
Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606
||||| ||||||||||| ||||| | || || |||||||| || | || ||| | |
Sbjct 20740 GATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGT 20681
Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCG-CAATCGA 130665
|| |||||| | |||||||| | | || | || | | || ||| | ||| |
Sbjct 20680 GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCT 20621
Query 130666 TTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC--AAT-CC 130722
| || || ||| ||||||| ||||| ||| | | | | ||| | | ||| ||
Sbjct 20620 TGGATCGA-ACCATTGTTGGAAATAAT---GTTACTCTTCATAGCATCATTCCAAATACC 20565
Query 130723 AAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGAC 130782
| | || | ||| || | ||| | ||| | ||||| || |||||||||| ||
Sbjct 20564 CAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTCACCAGCCAAAAC 20505
Query 130783 GCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTG 130842
| |||| |||||||||| ||| | ||||| || |||| ||||| || || |||||
Sbjct 20504 TCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTG 20445
Query 130843 TGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGT 130902
|| |||| || || ||||| || || || | || || | | ||| || | |
Sbjct 20444 TGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGC 20385
Query 130903 GATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACAT 130962
|| ||| | ||||| |||||||||||||| || ||||| |||||||||
Sbjct 20384 CATCTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTTGGTTT---TCTGTTCCACAA 20328
Query 130963 ATCAAATTGTAGTATGCCTTTA----CTGGCGGGACTGGATTCGAACGATTCGTAGATTC 131018
|||||||||| || |||| | |||| | |||| | ||| ||| |||| |
Sbjct 20327 GTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGT---AAC-TTTCATAGACAC 20272
Query 131019 CTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAA 131078
|||| || ||| | || | || ||| | ||| | | ||||||||||| |
Sbjct 20271 CTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAATGGTTTCAAAGA 20212
Query 131079 TTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAG 131138
|||| | ||||||| | | |||| | || | || ||| ||| | |||||||
Sbjct 20211 TTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCAATCTCAAAGACATAAAAG 20152
Query 131139 CGTCTGCGAGACCCTGTA-TCCCAACGCCCACCGGTCTATGTTTTAAATTACAT 131191
| || || | ||| || | ||||| | | | ||||| ||| | | |||| ||
Sbjct 20151 CATCAGCTAAACCTTGAACACCCAAAG-CAATTGGTCTGTGTCTCATATTAGAT 20099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424932499348104
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