Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq325 230 3e-55
seq51 230 3e-55
seq1 98.7 1e-15
>seq325
Length=13538
Score = 230 bits (254), Expect = 3e-55
Identities = 855/1321 (65%), Gaps = 37/1321 (3%)
Strand=Plus/Minus
Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728
|||||||| || ||||| || | |||||| ||| ||||| | ||||| |||
Sbjct 12264 TTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGT 12205
Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788
|| || |||||||| |||||||||||||||| || || || ||||||||||| || | |
Sbjct 12204 TCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACC 12145
Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG--T 110846
|| | ||| | | ||| | | || || || | | |||||| || |
Sbjct 12144 AACAAGGAGTTTCTCAAACCATGTTTGGCCATCTTTTGTTTCAAAGTATCCCAATCCCAT 12085
Query 110847 AGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906
| || || ||||||| |||| ||| |||||| || | | ||||| || || ||||
Sbjct 12084 AATTCAG-TTGGTTTTCTGTTCC-ACAAGTCAAATTGTAATAAACCTTGAGAAGCTGGAG 12027
Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966
|||| | |||||||| ||||| | |||| |||||| | || | |
Sbjct 12026 AACCTGGGTAACTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAG 11967
Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026
|| || || |||||||||||||| || || | || | ||||| | |||||||
Sbjct 11966 CAGCATGGTAAATGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAA 11907
Query 111027 ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTC 111086
||| | | | | ||||| |||| || | |||||||||||||||| |||| ||||
Sbjct 11906 ATGGCAATCTCAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGCAATTGGTC 11847
Query 111087 TGTGTCGCATATTAGA-CTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAATGAC 111144
|||||| ||||||||| ||||| || ||| ||| || || | || | || || ||
Sbjct 11846 TGTGTCTCATATTAGATCTTTC-AGC-TTCTGGAACTGGGTAGTAGTTACGATCGATAAC 11789
Query 111145 TCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA---TAATCAAA 111201
|| ||| | || || |||| || || | |||||| | ||||||| | || |
Sbjct 11788 TCTGTTCAAGTTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTTATACCA 11729
Query 111202 AGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 111255
||| | | ||||| | ||| | ||| | || || || ||||| || ||
Sbjct 11728 AGT---ATTGCTTTCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGTTACA 11672
Query 111256 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTT 111315
|||||| ||||| | | | || || | |||||| ||| ||||||||| ||
Sbjct 11671 AACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATTT 11612
Query 111316 AATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTA 111375
|| |||||||||||||||||| |||| |||| || ||||| || || | ||| |
Sbjct 11611 GATGACACCCAAATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACATAAA 11552
Query 111376 GGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGC--TGGT 111433
|| || || || || || || | | | ||||| | ||| | | ||| || |
Sbjct 11551 TGGAGTACCAGTTTCGGTTTGGGCACTCAAGATAGCGTACCATAATTTTTGGGCTTTGAT 11492
Query 111434 ACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493
|| | | | || |||| ||||| | || || | ||||||| || |||
Sbjct 11491 GGTTTGTC--TACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTCATCA 11434
Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCT 111553
|| | || || | |||||| || | | |||| |||| | || ||| | ||| |
Sbjct 11433 CCGTAGACATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACCGTTT 11374
Query 111554 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACA 111612
| ||||| | ||||||||| | ||||| ||||||| | || || | ||||| |
Sbjct 11373 TGTTCAACTCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTGGCT 11314
Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 111672
| || ||||| | ||| ||||| || | || | || || | |||||| |||
Sbjct 11313 CTGA-TTTCTTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACTGTG 11255
Query 111673 CCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACAT 111728
|||||| || | || | || | || || || | | ||| |||||| ||||
Sbjct 11254 CCATGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGATCAACAT 11196
Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 111788
| || || ||| ||| || || | | ||| ||||||||||| | || |||||| |
Sbjct 11195 AACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAG 11136
Query 111789 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 111848
| || ||| || | ||| | | | |||||||||| |||||||| ||||
Sbjct 11135 TACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAG 11076
Query 111849 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 111908
| | ||| || ||| ||||| | | ||| | || ||||| | || || || |
Sbjct 11075 CACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCAT 11016
Query 111909 CCTTGTTGGCGATAAGGAAGCAAC-TG--GACATCTGCGGTCTTGGTGTACCAGCATTGA 111965
|||| | || ||| ||| ||| || ||||| || |||||||| ||||| |||||||
Sbjct 11015 CCTTCATAGC---AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGA 10959
Query 111966 A 111966
|
Sbjct 10958 A 10958
>seq51
Length=22326
Score = 230 bits (254), Expect = 3e-55
Identities = 855/1321 (65%), Gaps = 37/1321 (3%)
Strand=Plus/Minus
Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728
|||||||| || ||||| || | |||||| ||| ||||| | ||||| |||
Sbjct 20533 TTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGT 20474
Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788
|| || |||||||| |||||||||||||||| || || || ||||||||||| || | |
Sbjct 20473 TCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACC 20414
Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG--T 110846
|| | ||| | | ||| | | || || || | | |||||| || |
Sbjct 20413 AACAAGGAGTTTCTCAAACCATGTTTGGCCATCTTTTGTTTCAAAGTATCCCAATCCCAT 20354
Query 110847 AGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906
| || || ||||||| |||| ||| |||||| || | | ||||| || || ||||
Sbjct 20353 AATTCAG-TTGGTTTTCTGTTCC-ACAAGTCAAATTGTAATAAACCTTGAGAAGCTGGAG 20296
Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966
|||| | |||||||| ||||| | |||| |||||| | || | |
Sbjct 20295 AACCTGGGTAACTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAG 20236
Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026
|| || || |||||||||||||| || || | || | ||||| | |||||||
Sbjct 20235 CAGCATGGTAAATGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAA 20176
Query 111027 ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTC 111086
||| | | | | ||||| |||| || | |||||||||||||||| |||| ||||
Sbjct 20175 ATGGCAATCTCAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGCAATTGGTC 20116
Query 111087 TGTGTCGCATATTAGA-CTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAATGAC 111144
|||||| ||||||||| ||||| || ||| ||| || || | || | || || ||
Sbjct 20115 TGTGTCTCATATTAGATCTTTC-AGC-TTCTGGAACTGGGTAGTAGTTACGATCGATAAC 20058
Query 111145 TCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA---TAATCAAA 111201
|| ||| | || || |||| || || | |||||| | ||||||| | || |
Sbjct 20057 TCTGTTCAAGTTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTTATACCA 19998
Query 111202 AGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 111255
||| | | ||||| | ||| | ||| | || || || ||||| || ||
Sbjct 19997 AGT---ATTGCTTTCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGTTACA 19941
Query 111256 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTT 111315
|||||| ||||| | | | || || | |||||| ||| ||||||||| ||
Sbjct 19940 AACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATTT 19881
Query 111316 AATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTA 111375
|| |||||||||||||||||| |||| |||| || ||||| || || | ||| |
Sbjct 19880 GATGACACCCAAATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACATAAA 19821
Query 111376 GGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGC--TGGT 111433
|| || || || || || || | | | ||||| | ||| | | ||| || |
Sbjct 19820 TGGAGTACCAGTTTCGGTTTGGGCACTCAAGATAGCGTACCATAATTTTTGGGCTTTGAT 19761
Query 111434 ACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493
|| | | | || |||| ||||| | || || | ||||||| || |||
Sbjct 19760 GGTTTGTC--TACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTCATCA 19703
Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCT 111553
|| | || || | |||||| || | | |||| |||| | || ||| | ||| |
Sbjct 19702 CCGTAGACATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACCGTTT 19643
Query 111554 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACA 111612
| ||||| | ||||||||| | ||||| ||||||| | || || | ||||| |
Sbjct 19642 TGTTCAACTCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTGGCT 19583
Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 111672
| || ||||| | ||| ||||| || | || | || || | |||||| |||
Sbjct 19582 CTGA-TTTCTTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACTGTG 19524
Query 111673 CCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACAT 111728
|||||| || | || | || | || || || | | ||| |||||| ||||
Sbjct 19523 CCATGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGATCAACAT 19465
Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 111788
| || || ||| ||| || || | | ||| ||||||||||| | || |||||| |
Sbjct 19464 AACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAG 19405
Query 111789 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 111848
| || ||| || | ||| | | | |||||||||| |||||||| ||||
Sbjct 19404 TACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAG 19345
Query 111849 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 111908
| | ||| || ||| ||||| | | ||| | || ||||| | || || || |
Sbjct 19344 CACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCAT 19285
Query 111909 CCTTGTTGGCGATAAGGAAGCAAC-TG--GACATCTGCGGTCTTGGTGTACCAGCATTGA 111965
|||| | || ||| ||| ||| || ||||| || |||||||| ||||| |||||||
Sbjct 19284 CCTTCATAGC---AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGA 19228
Query 111966 A 111966
|
Sbjct 19227 A 19227
>seq1
Length=76776
Score = 98.7 bits (108), Expect = 1e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|||||| | ||||| ||||| || || | ||||| || ||||||||| ||||||
Sbjct 32935 TATGGTAGAGTTGCTCCACGTTCTGGATTAGCTGTTAAACATGGTATTTCTACTGGTGCT 32994
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|||||||||||| | || ||| |||||||| ||||| ||| | || ||||| | ||
Sbjct 32995 GGTGTTATTGATGCTGATTATCGTGGTGAAGTTAAAGTTGTTTTATTTAATCATAGTGAA 33054
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762
||||| ||||| | || |||| ||| | || || |||
Sbjct 33055 AAAGATTTTGAAATTAAACAAGGTGATAGAATTGCTCAA 33093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029118903200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |