Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq311 98.7 5e-16 >seq311 Length=49457 Score = 98.7 bits (108), Expect = 5e-16 Identities = 343/524 (65%), Gaps = 15/524 (3%) Strand=Plus/Minus Query 64862 GGATTATAACACATAATGTCAGT--ACTAAATCCTGTGCCAATACCCTTTGAGCCATTTA 64919 ||||||||| | ||| | ||| || || || || |||||||| | | ||||| | Sbjct 37367 GGATTATAAGAAGGAATATTAGTTGACCAA--CCAGTACCAATACCTTCAGCACCATTGA 37310 Query 64920 TTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCAT 64979 ||||||||| || | || || ||| | || |||||| | | ||||||| | Sbjct 37309 CTAAAATCATTGGCAAAACAGGAAGATACCACTCTGGTTCAACAGTTTGTTCATCATCTT 37250 Query 64980 CCAAATACTTCAA-AATGGCATCATCCTCTT--TTGGAAATATAGAACGAGTTATTTTAT 65036 | ||| || | ||||| ||||||| | ||| ||||| | ||| |||| || Sbjct 37249 GAACATAATTATACAATGG-ATCATCCAATGGATTG--AATATCTTTCTAGTAATTTCAT 37193 Query 65037 TCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCAGTT-CG--TCGTGTTC 65093 |||||| || |||||||||| | | | | |||| ||| || || | | Sbjct 37192 TCAATTCTGTGAAAATATATCTCGCAGCGGAGAAATCTTTACCACCAGCGGCTCTACTAC 37133 Query 65094 CAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCA 65153 |||| ||||||||| |||| | || ||||| || ||||||| ||| || || |||| Sbjct 37132 CAAAGGAACCATTTGGTTTTAAGATGTTGATATTATTAGAACCAACAAAGTTTTGTGCCA 37073 Query 65154 TTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAG 65212 || || || | ||| | | | ||| |||| |||||||| || | | |||| Sbjct 37072 ACCCAATGATGGTCTGAACCAATGATTGCT-CACCATGATGATAACCAGTGTTTTCACTT 37014 Query 65213 ACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAA 65272 ||||| ||| ||||||||||| || ||||| || |||| || || || | | | Sbjct 37013 ACATACCCAGCCAATTGAGCAACCTTAATTTCACTTTTTAATTTTTTCTTGATACAACCA 36954 Query 65273 TACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCA 65332 ||||| | ||| | | || |||||| ||||| | || |||||| |||| | Sbjct 36953 TACAAAACTTTTCTTTGACCTGGTTTCAAACCATCAAGTACTGAAGGAATAGATCTGATA 36894 Query 65333 CAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTC 65376 |||| | | ||||| || ||||||||||| ||||| || Sbjct 36893 TTATCAGACATGGAGAATAAAATCAATTCTTTGTTGATAAAATC 36850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235678945847550