Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq325 127 2e-24 seq51 127 2e-24 seq106 105 8e-18 >seq325 Length=13538 Score = 127 bits (140), Expect = 2e-24 Identities = 245/359 (68%), Gaps = 2/359 (1%) Strand=Plus/Minus Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 ||||| || | || ||||| ||||| ||| || || | | |||||| || ||||| Sbjct 11211 CCACCTTGATCAACATAACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCG 11152 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || ||| || ||||| | || | || ||| || | ||| ||| || Sbjct 11151 TTGGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGC 11092 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || ||| || ||||| | | ||| ||||| |||||| |||| || || ||||| Sbjct 11091 AA-ACCAATACCACCAGCACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAAT 11033 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 || || ||| ||| | ||||| ||||||||||||| ||||| || || ||| Sbjct 11032 ACCTTCAATGGAATCATCCTTCATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGG 10973 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | ||||||||||||| ||||| |||| ||||||| | | |||||||| | Sbjct 10972 GGTACCGGCATTGAACAAACATGGGGAACCGTGTGTGAAATATCTTTGTGACATCAAATT 10913 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736 ||| ||||| | || | ||||||||| | |||||||||||| ||||| || | ||||| Sbjct 10912 ATAAGTTTCAATAACTCTTGGAATATCTTTACCGTGAATACCAATAGCAACTCTCATAA 10854 >seq51 Length=22326 Score = 127 bits (140), Expect = 2e-24 Identities = 245/359 (68%), Gaps = 2/359 (1%) Strand=Plus/Minus Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 ||||| || | || ||||| ||||| ||| || || | | |||||| || ||||| Sbjct 19480 CCACCTTGATCAACATAACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCG 19421 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || ||| || ||||| | || | || ||| || | ||| ||| || Sbjct 19420 TTGGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGC 19361 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || ||| || ||||| | | ||| ||||| |||||| |||| || || ||||| Sbjct 19360 AA-ACCAATACCACCAGCACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAAT 19302 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 || || ||| ||| | ||||| ||||||||||||| ||||| || || ||| Sbjct 19301 ACCTTCAATGGAATCATCCTTCATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGG 19242 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | ||||||||||||| ||||| |||| ||||||| | | |||||||| | Sbjct 19241 GGTACCGGCATTGAACAAACATGGGGAACCGTGTGTGAAATATCTTTGTGACATCAAATT 19182 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736 ||| ||||| | || | ||||||||| | |||||||||||| ||||| || | ||||| Sbjct 19181 ATAAGTTTCAATAACTCTTGGAATATCTTTACCGTGAATACCAATAGCAACTCTCATAA 19123 >seq106 Length=24021 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || || |||||||| | || || || || Sbjct 4371 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 4312 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || ||||||| || ||||| || || ||||| ||||| || Sbjct 4311 GACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAA 4252 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 4251 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 4192 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| || | || | |||||| Sbjct 4191 ATCCAAAAGGAATCTACCTTGCACTTGGTCTTG 4159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307783701040