Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq297 116 9e-21 seq106 98.7 2e-15 >seq297 Length=71103 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | ||| || |||||||| ||||| || || | | ||| || || Sbjct 34784 TCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 34725 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || ||||| || | | |||||| || || |||| ||||| || Sbjct 34724 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 34665 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||| || ||| ||||| || ||||||||||| |||||| || | |||||| Sbjct 34664 ATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 34605 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || | |||||| || || | |||||| Sbjct 34604 AGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATT 34568 >seq106 Length=24021 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | || || || ||||||||||| || || | | || || || Sbjct 4156 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 4215 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | |||||| || || |||| ||||| || Sbjct 4216 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 4275 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || ||| || || || |||||||| ||| ||| || || | || || Sbjct 4276 GTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 4335 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || | ||||| || || | ||||| || Sbjct 4336 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 4374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146549449955