Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq297 116 9e-21
seq106 98.7 2e-15
>seq297
Length=71103
Score = 116 bits (128), Expect = 9e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | ||| || |||||||| ||||| || || | | ||| || ||
Sbjct 34784 TCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 34725
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | || || || ||||| || | | |||||| || || |||| ||||| ||
Sbjct 34724 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 34665
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||| || ||| ||||| || ||||||||||| |||||| || | ||||||
Sbjct 34664 ATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 34605
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || | |||||| || || | ||||||
Sbjct 34604 AGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATT 34568
>seq106
Length=24021
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | || || || ||||||||||| || || | | || || ||
Sbjct 4156 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 4215
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || ||||| | | |||||| || || |||| ||||| ||
Sbjct 4216 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 4275
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || ||| || || || |||||||| ||| ||| || || | || ||
Sbjct 4276 GTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 4335
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || | ||||| || || | ||||| ||
Sbjct 4336 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 4374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159146549449955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |