Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq307 349 3e-91 seq250 345 4e-90 seq124 289 2e-73 >seq307 Length=48190 Score = 349 bits (386), Expect = 3e-91 Identities = 623/900 (69%), Gaps = 12/900 (1%) Strand=Plus/Minus Query 4238 CTTTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTT 4296 |||| ||| ||||||| ||||||||| || || |||| ||||||||| || || |||| Sbjct 40016 CTTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTT 39957 Query 4297 TGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-T 4355 | || | || |||||||||||||| ||||| || || ||||| | |||||| ||| | Sbjct 39956 TACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCT 39897 Query 4356 TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT 4415 | || || || | | |||| ||||| ||| |||| | ||| || | ||| | Sbjct 39896 TGTTACCCAAG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAG 39838 Query 4416 TCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATA 4475 || ||||| || || | ||| || || || || | || ||| | |||| ||| | | Sbjct 39837 TCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACA 39778 Query 4476 GTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTAT 4535 || ||||| || || | || | | ||| ||||||| | | | |||| Sbjct 39777 TCAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 39718 Query 4536 CCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTA 4595 ||||| ||||| ||||||||| ||| |||||||| ||||| | |||| ||| || Sbjct 39717 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 39658 Query 4596 GAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGAC 4655 || || || || || ||||| |||||||||||||| | ||| || |||| |||||||| Sbjct 39657 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 39598 Query 4656 CCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCT 4714 ||| ||||| || ||||| | || ||||| || || |||| | | | ||| Sbjct 39597 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC- 39539 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 |||| |||| ||||||||| | ||||| | |||||| || ||| || ||||| | Sbjct 39538 ATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 39479 Query 4775 GTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834 | || || ||||| || | ||| |||||||| || |||||| || |||| Sbjct 39478 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 39419 Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894 || ||||||||||||||| || ||||| || || || || || || || || | Sbjct 39418 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 39359 Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954 |||||||| | ||| |||||| | |||| |||| | |||||||| || ||||| Sbjct 39358 AGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 39299 Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTT 5011 ||| || || ||||| || ||||| ||| | ||| || | ||| |||| || Sbjct 39298 ATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCA--TTT 39241 Query 5012 AAGT--TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAAC 5069 || | || ||||| | |||||||||| ||||||||||||||||| |||||| || Sbjct 39240 AATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAG 39181 Query 5070 GACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129 || ||||| |||||||| || | | ||| || ||| |||| | ||| |||| || ||| Sbjct 39180 GAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACA 39121 >seq250 Length=32566 Score = 345 bits (382), Expect = 4e-90 Identities = 622/900 (69%), Gaps = 12/900 (1%) Strand=Plus/Minus Query 4238 CTTTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTT 4296 |||| ||| ||||||| ||||||||| || || |||| ||||||||| || || |||| Sbjct 29502 CTTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTT 29443 Query 4297 TGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-T 4355 | || | || |||||||||||||| ||||| || || ||||| | |||||| ||| | Sbjct 29442 TACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCT 29383 Query 4356 TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT 4415 | || || || | | |||| ||||| ||| |||| | ||| || | ||| | Sbjct 29382 TGTTACCCAAG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAG 29324 Query 4416 TCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATA 4475 || ||||| || || | ||| || || || || | || ||| | |||| ||| | | Sbjct 29323 TCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACA 29264 Query 4476 GTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTAT 4535 || ||||| || || | || | | ||| ||||||| | | | |||| Sbjct 29263 TCAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 29204 Query 4536 CCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTA 4595 ||||| ||||| ||||||||| ||| |||||||| ||||| | |||| ||| || Sbjct 29203 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 29144 Query 4596 GAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGAC 4655 || || || || || ||||| |||||||||||||| | ||| || |||| |||||||| Sbjct 29143 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 29084 Query 4656 CCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCT 4714 ||| ||||| || ||||| | || ||||| || || |||| | | | ||| Sbjct 29083 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC- 29025 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 |||| |||| ||||||||| | ||||| | |||||| || ||| || ||||| | Sbjct 29024 ATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 28965 Query 4775 GTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834 | || || ||||| || | ||| |||||||| || |||||| || |||| Sbjct 28964 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 28905 Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894 || ||||||||||||||| || ||||| || || || || || || || || | Sbjct 28904 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 28845 Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954 |||||||| | ||| ||||| | |||| |||| | |||||||| || ||||| Sbjct 28844 AGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 28785 Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTT 5011 ||| || || ||||| || ||||| ||| | ||| || | ||| |||| || Sbjct 28784 ATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCA--TTT 28727 Query 5012 AAGT--TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAAC 5069 || | || ||||| | |||||||||| ||||||||||||||||| |||||| || Sbjct 28726 AATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAG 28667 Query 5070 GACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129 || ||||| |||||||| || | | ||| || ||| |||| | ||| |||| || ||| Sbjct 28666 GAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACA 28607 >seq124 Length=102737 Score = 289 bits (320), Expect = 2e-73 Identities = 603/884 (68%), Gaps = 17/884 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| | ||||||| || || |||| |||||| |||||||| ||||| || | || Sbjct 21079 ACACCAGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAG 21138 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 || ||||||||||| |||||||| |||||||| |||| |||| || ||| | | Sbjct 21139 GATATATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCATTACCAAAA 21198 Query 4368 GCTACAAGCAATCGGTCAGCTACAA-ATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 || || | ||||| || || |||| |||| | ||| || | ||| | || || || || Sbjct 21199 GCAACCAACAATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCAT 21257 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 || | || || || ||||| | | || ||| | ||| ||| | || ||||| Sbjct 21258 ACCCAACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCTTC 21317 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAAT 4544 ||||| ||||||| | | || ||| || ||||| | |||||| ||| | | Sbjct 21318 AGTGAT--AATCTTTTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGAAAATAGT 21375 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| ||| |||| || | ||||||||| || | |||| ||| || || || ||| Sbjct 21376 AAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTT 21435 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||| || ||||| ||||| | |||||| || | || ||||||||| ||| Sbjct 21436 AAACCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAG 21495 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || |||||||| | || ||||| || || |||| | ||| || ||| |||| Sbjct 21496 AAAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCT 21555 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 | ||||||| | | ||||| | ||||||| || | | ||| ||| || ||| Sbjct 21556 TGAATCCATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCG 21615 Query 4785 TTAAATAATTTA-CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || || || | | | | | | |||||| || || || |||| ||| ||| Sbjct 21616 TTGAACAAGAAATCGGCCTCCTTAGGATCCTTGAA-GTAGGTTTCAATTAAAAGGGAATA 21674 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATC-TAGCTTCTG 4902 |||| ||||| |||||||| || ||||| ||| || ||| || | | ||||| | Sbjct 21675 TGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCAG 21733 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | || |||||| ||||||| |||| || |||||||| || |||||||| || | Sbjct 21734 GAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATG 21793 Query 4963 CTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TT 5017 | |||||||| || |||| | |||||| ||| | || ||| || || | | || Sbjct 21794 CAGCAAAAAAGGCTAAAACTCTTGAGATGAAAAAT-CT-TTCATCTTTATTCATTTTATT 21851 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 || ||| | ||||||||| | || |||| |||||| | |||||||| || || | Sbjct 21852 TTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAAC 21911 Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121 | ||| ||||| | || |||||| |||||||| | || |||| Sbjct 21912 AGATTTCTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAA 21955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047689887211