Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq307 349 3e-91
seq250 345 4e-90
seq124 289 2e-73
>seq307
Length=48190
Score = 349 bits (386), Expect = 3e-91
Identities = 623/900 (69%), Gaps = 12/900 (1%)
Strand=Plus/Minus
Query 4238 CTTTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTT 4296
|||| ||| ||||||| ||||||||| || || |||| ||||||||| || || ||||
Sbjct 40016 CTTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTT 39957
Query 4297 TGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-T 4355
| || | || |||||||||||||| ||||| || || ||||| | |||||| ||| |
Sbjct 39956 TACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCT 39897
Query 4356 TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT 4415
| || || || | | |||| ||||| ||| |||| | ||| || | ||| |
Sbjct 39896 TGTTACCCAAG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAG 39838
Query 4416 TCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATA 4475
|| ||||| || || | ||| || || || || | || ||| | |||| ||| | |
Sbjct 39837 TCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACA 39778
Query 4476 GTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTAT 4535
|| ||||| || || | || | | ||| ||||||| | | | ||||
Sbjct 39777 TCAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 39718
Query 4536 CCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTA 4595
||||| ||||| ||||||||| ||| |||||||| ||||| | |||| ||| ||
Sbjct 39717 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 39658
Query 4596 GAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGAC 4655
|| || || || || ||||| |||||||||||||| | ||| || |||| ||||||||
Sbjct 39657 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 39598
Query 4656 CCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCT 4714
||| ||||| || ||||| | || ||||| || || |||| | | | |||
Sbjct 39597 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC- 39539
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774
|||| |||| ||||||||| | ||||| | |||||| || ||| || ||||| |
Sbjct 39538 ATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 39479
Query 4775 GTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834
| || || ||||| || | ||| |||||||| || |||||| || ||||
Sbjct 39478 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 39419
Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894
|| ||||||||||||||| || ||||| || || || || || || || || |
Sbjct 39418 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 39359
Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954
|||||||| | ||| |||||| | |||| |||| | |||||||| || |||||
Sbjct 39358 AGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 39299
Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTT 5011
||| || || ||||| || ||||| ||| | ||| || | ||| |||| ||
Sbjct 39298 ATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCA--TTT 39241
Query 5012 AAGT--TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAAC 5069
|| | || ||||| | |||||||||| ||||||||||||||||| |||||| ||
Sbjct 39240 AATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAG 39181
Query 5070 GACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129
|| ||||| |||||||| || | | ||| || ||| |||| | ||| |||| || |||
Sbjct 39180 GAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACA 39121
>seq250
Length=32566
Score = 345 bits (382), Expect = 4e-90
Identities = 622/900 (69%), Gaps = 12/900 (1%)
Strand=Plus/Minus
Query 4238 CTTTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTT 4296
|||| ||| ||||||| ||||||||| || || |||| ||||||||| || || ||||
Sbjct 29502 CTTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTT 29443
Query 4297 TGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-T 4355
| || | || |||||||||||||| ||||| || || ||||| | |||||| ||| |
Sbjct 29442 TACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCT 29383
Query 4356 TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT 4415
| || || || | | |||| ||||| ||| |||| | ||| || | ||| |
Sbjct 29382 TGTTACCCAAG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAG 29324
Query 4416 TCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATA 4475
|| ||||| || || | ||| || || || || | || ||| | |||| ||| | |
Sbjct 29323 TCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACA 29264
Query 4476 GTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTAT 4535
|| ||||| || || | || | | ||| ||||||| | | | ||||
Sbjct 29263 TCAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 29204
Query 4536 CCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTA 4595
||||| ||||| ||||||||| ||| |||||||| ||||| | |||| ||| ||
Sbjct 29203 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 29144
Query 4596 GAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGAC 4655
|| || || || || ||||| |||||||||||||| | ||| || |||| ||||||||
Sbjct 29143 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 29084
Query 4656 CCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCT 4714
||| ||||| || ||||| | || ||||| || || |||| | | | |||
Sbjct 29083 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC- 29025
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774
|||| |||| ||||||||| | ||||| | |||||| || ||| || ||||| |
Sbjct 29024 ATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 28965
Query 4775 GTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834
| || || ||||| || | ||| |||||||| || |||||| || ||||
Sbjct 28964 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 28905
Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894
|| ||||||||||||||| || ||||| || || || || || || || || |
Sbjct 28904 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 28845
Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954
|||||||| | ||| ||||| | |||| |||| | |||||||| || |||||
Sbjct 28844 AGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 28785
Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTT 5011
||| || || ||||| || ||||| ||| | ||| || | ||| |||| ||
Sbjct 28784 ATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCA--TTT 28727
Query 5012 AAGT--TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAAC 5069
|| | || ||||| | |||||||||| ||||||||||||||||| |||||| ||
Sbjct 28726 AATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAG 28667
Query 5070 GACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129
|| ||||| |||||||| || | | ||| || ||| |||| | ||| |||| || |||
Sbjct 28666 GAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACA 28607
>seq124
Length=102737
Score = 289 bits (320), Expect = 2e-73
Identities = 603/884 (68%), Gaps = 17/884 (2%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| | ||||||| || || |||| |||||| |||||||| ||||| || | ||
Sbjct 21079 ACACCAGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAG 21138
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367
|| ||||||||||| |||||||| |||||||| |||| |||| || ||| | |
Sbjct 21139 GATATATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCATTACCAAAA 21198
Query 4368 GCTACAAGCAATCGGTCAGCTACAA-ATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
|| || | ||||| || || |||| |||| | ||| || | ||| | || || || ||
Sbjct 21199 GCAACCAACAATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCAT 21257
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|| | || || || ||||| | | || ||| | ||| ||| | || |||||
Sbjct 21258 ACCCAACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCTTC 21317
Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAAT 4544
||||| ||||||| | | || ||| || ||||| | |||||| ||| | |
Sbjct 21318 AGTGAT--AATCTTTTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGAAAATAGT 21375
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| ||| |||| || | ||||||||| || | |||| ||| || || || |||
Sbjct 21376 AAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTT 21435
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
|| || ||||| || ||||| ||||| | |||||| || | || ||||||||| |||
Sbjct 21436 AAACCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAG 21495
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724
|| |||||||| | || ||||| || || |||| | ||| || ||| ||||
Sbjct 21496 AAAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCT 21555
Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784
| ||||||| | | ||||| | ||||||| || | | ||| ||| || |||
Sbjct 21556 TGAATCCATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCG 21615
Query 4785 TTAAATAATTTA-CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843
|| || || | | | | | | |||||| || || || |||| ||| |||
Sbjct 21616 TTGAACAAGAAATCGGCCTCCTTAGGATCCTTGAA-GTAGGTTTCAATTAAAAGGGAATA 21674
Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATC-TAGCTTCTG 4902
|||| ||||| |||||||| || ||||| ||| || ||| || | | ||||| |
Sbjct 21675 TGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCAG 21733
Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
| || |||||| ||||||| |||| || |||||||| || |||||||| || |
Sbjct 21734 GAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATG 21793
Query 4963 CTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TT 5017
| |||||||| || |||| | |||||| ||| | || ||| || || | | ||
Sbjct 21794 CAGCAAAAAAGGCTAAAACTCTTGAGATGAAAAAT-CT-TTCATCTTTATTCATTTTATT 21851
Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077
|| ||| | ||||||||| | || |||| |||||| | |||||||| || || |
Sbjct 21852 TTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAAC 21911
Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121
| ||| ||||| | || |||||| |||||||| | || ||||
Sbjct 21912 AGATTTCTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAA 21955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047689887211
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