Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq250 331 1e-85 seq307 325 4e-84 seq124 188 7e-43 >seq250 Length=32566 Score = 331 bits (366), Expect = 1e-85 Identities = 607/888 (68%), Gaps = 20/888 (2%) Strand=Plus/Minus Query 23158 TTTTAAAAATCTTCATCTAAAGTGAA--------TTTCACTG-CTTTATCACTATTCATA 23208 ||||| ||||||||||| |||||||| |||| ||| ||| | | || |||| Sbjct 29551 TTTTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATA 29492 Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268 ||||| |||||| || || ||| | |||||||||| || || ||||| | || Sbjct 29491 ACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAG 29432 Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA-- 23326 || ||||||||||| ||||| ||||| |||| | ||| || || || | || || Sbjct 29431 GAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAAC----TTTCTTGTTACC 29376 Query 23327 --ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384 | | ||| | ||||| || ||| |||||| ||||||||||||||| ||| |||| Sbjct 29375 CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTT 29316 Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444 ||||| | || ||||||| |||||| || || |||||||| |||||| Sbjct 29315 CATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGC 29256 Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504 || ||| || | ||| || |||| | ||| | || || | ||||| Sbjct 29255 TTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAA 29196 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 ||||| ||||||||| ||||| |||||||| |||| ||||||||||| || || || Sbjct 29195 CAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGT 29136 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624 || |||||||| || |||| ||||| | ||| || || | ||||||||| || || Sbjct 29135 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAA 29076 Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684 ||||||||| |||| ||| ||||| || || | | | | || || |||| | ||| Sbjct 29075 GAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATC 29016 Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744 ||||||||| | | ||| | ||| ||| | | ||| ||| ||||||| || Sbjct 29015 TTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGC 28956 Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804 || || | ||| ||||| ||| | | ||| || ||||||| |||| ||| Sbjct 28955 ATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATA 28896 Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864 ||||||||||||||| ||||| || || || || ||||| || || ||||||| | Sbjct 28895 CATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGG 28836 Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924 || ||| || ||| | |||| ||| | || ||||| ||||||||||||| ||| Sbjct 28835 CAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGC 28776 Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTT 23981 ||| || || || | ||| | ||||| | ||||| ||| || || || || Sbjct 28775 AGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTT 28716 Query 23982 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 |||||||| | |||||| |||||||||||| ||| ||||| || Sbjct 28715 CCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 28668 >seq307 Length=48190 Score = 325 bits (360), Expect = 4e-84 Identities = 606/888 (68%), Gaps = 20/888 (2%) Strand=Plus/Minus Query 23158 TTTTAAAAATCTTCATCTAAAGTGAA--------TTTCACTG-CTTTATCACTATTCATA 23208 ||||| ||||||||||| |||||||| |||| ||| ||| | | || |||| Sbjct 40065 TTTTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATA 40006 Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268 ||||| |||||| || || ||| | |||||||||| || || ||||| | || Sbjct 40005 ACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAG 39946 Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA-- 23326 || ||||||||||| ||||| ||||| |||| | ||| || || || | || || Sbjct 39945 GAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAAC----TTTCTTGTTACC 39890 Query 23327 --ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384 | | ||| | ||||| || ||| |||||| ||||||||||||||| ||| |||| Sbjct 39889 CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTT 39830 Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444 ||||| | || ||||||| |||||| || || |||||||| |||||| Sbjct 39829 CATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGC 39770 Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504 || ||| || | ||| || |||| | ||| | || || | ||||| Sbjct 39769 TTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAA 39710 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 ||||| ||||||||| ||||| |||||||| |||| ||||||||||| || || || Sbjct 39709 CAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGT 39650 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624 || |||||||| || |||| ||||| | ||| || || | ||||||||| || || Sbjct 39649 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAA 39590 Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684 ||||||||| |||| ||| ||||| || || | | | | || || |||| | ||| Sbjct 39589 GAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATC 39530 Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744 ||||||||| | | ||| | ||| ||| | | ||| ||| ||||||| || Sbjct 39529 TTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGC 39470 Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804 || || | ||| ||||| ||| | | ||| || ||||||| |||| ||| Sbjct 39469 ATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATA 39410 Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864 ||||||||||||||| ||||| || || || || ||||| || || ||||||| | Sbjct 39409 CATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGG 39350 Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924 || ||| || || | |||| ||| | || ||||| ||||||||||||| ||| Sbjct 39349 CAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGC 39290 Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTT 23981 ||| || || || | ||| | ||||| | ||||| ||| || || || || Sbjct 39289 AGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTT 39230 Query 23982 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 |||||||| | |||||| |||||||||||| ||| ||||| || Sbjct 39229 CCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 39182 >seq124 Length=102737 Score = 188 bits (208), Expect = 7e-43 Identities = 562/856 (66%), Gaps = 21/856 (2%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||| || ||||| || ||||| | || |||||||||||||| |||||||||||||||| Sbjct 21110 TTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAATGGATTAG 21169 Query 23300 AAGTATTATATACAGCTTTACATGAT--AATTCCTTTAAAAGCCTATCTGCTACAA-ATT 23356 ||||| | | ||| ||| | || | || | ||||| || |||| ||| Sbjct 21170 TCACGTTATA-ATA-CTTATCATTACCAAAAGCAACCAACAATCTATCGGC-ACAATATT 21226 Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416 | | ||||||||||||||||||| | || ||||| | | ||||||| ||||||| Sbjct 21227 CCACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCATCAC 21286 Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCAC 23476 ||| | |||||||| |||||| || | || || | | |||| | Sbjct 21287 TGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAATCTTTTCTATAATGGAAGGAT 21346 Query 23477 TAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCAT 23536 || || | || || ||| | |||||| ||| |||| || | ||||| | Sbjct 21347 CCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTCGT 21406 Query 23537 CCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCC 23596 |||||| ||||||||||| || || ||||| |||||||| || |||| |||||| | || Sbjct 21407 CCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAACC 21466 Query 23597 AAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAA 23656 |||| || | ||| ||||| || |||||||| || |||| ||| ||||| ||||| | Sbjct 21467 AAAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCACCA 21526 Query 23657 GACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTT-- 23714 | | |||| || | | || ||||||| | | | ||||| || || Sbjct 21527 ATCTTTCTGCAAACAAGGCTTCTTCGTCTTGAATCCATCTAATAGCCCAATCTGCTTTTT 21586 Query 23715 ---CAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT 23771 |||| | | | ||| | ||||| || || || | ||| || | | Sbjct 21587 CACCAATGT-----ATTTAATATTGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGG 21641 Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 ||| | | || || ||||||| | ||| |||| ||||| |||||||| || Sbjct 21642 ATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGATATTTTCCATCAT 21701 Query 23832 AATCTGAAACCCATAAAAACATC-TAGCTTCAGACAATTGAACATCATTAAAAAATCTTT 23890 ||||| || | ||| || | | ||||||| | || ||| ||| || |||| ||| Sbjct 21702 GATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTT 21760 Query 23891 TAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTA 23950 | | || ||||| || || |||||||| |||||||| || || | ||| | | Sbjct 21761 CAACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGA 21820 Query 23951 TAAAATGTCTTTCATC--AGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAAT 24007 | ||| ||||||||| || || | |||| |||||||| || |||||| || | Sbjct 21821 TGAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAATCATCAAAATCTTTACTCAAGT 21880 Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 ||| ||| || |||||||||| ||| | | ||| || | |||||| ||| Sbjct 21881 CAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAG 21940 Query 24068 TATGTTGTATTGGAAA 24083 || || ||||||||| Sbjct 21941 GATATTTTATTGGAAA 21956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521485607673800