Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq250 331 1e-85
seq307 325 4e-84
seq124 188 7e-43
>seq250
Length=32566
Score = 331 bits (366), Expect = 1e-85
Identities = 607/888 (68%), Gaps = 20/888 (2%)
Strand=Plus/Minus
Query 23158 TTTTAAAAATCTTCATCTAAAGTGAA--------TTTCACTG-CTTTATCACTATTCATA 23208
||||| ||||||||||| |||||||| |||| ||| ||| | | || ||||
Sbjct 29551 TTTTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATA 29492
Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268
||||| |||||| || || ||| | |||||||||| || || ||||| | ||
Sbjct 29491 ACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAG 29432
Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA-- 23326
|| ||||||||||| ||||| ||||| |||| | ||| || || || | || ||
Sbjct 29431 GAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAAC----TTTCTTGTTACC 29376
Query 23327 --ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384
| | ||| | ||||| || ||| |||||| ||||||||||||||| ||| ||||
Sbjct 29375 CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTT 29316
Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444
||||| | || ||||||| |||||| || || |||||||| ||||||
Sbjct 29315 CATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGC 29256
Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504
|| ||| || | ||| || |||| | ||| | || || | |||||
Sbjct 29255 TTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAA 29196
Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564
||||| ||||||||| ||||| |||||||| |||| ||||||||||| || || ||
Sbjct 29195 CAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGT 29136
Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624
|| |||||||| || |||| ||||| | ||| || || | ||||||||| || ||
Sbjct 29135 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAA 29076
Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684
||||||||| |||| ||| ||||| || || | | | | || || |||| | |||
Sbjct 29075 GAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATC 29016
Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744
||||||||| | | ||| | ||| ||| | | ||| ||| ||||||| ||
Sbjct 29015 TTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGC 28956
Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804
|| || | ||| ||||| ||| | | ||| || ||||||| |||| |||
Sbjct 28955 ATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATA 28896
Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864
||||||||||||||| ||||| || || || || ||||| || || ||||||| |
Sbjct 28895 CATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGG 28836
Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
|| ||| || ||| | |||| ||| | || ||||| ||||||||||||| |||
Sbjct 28835 CAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGC 28776
Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTT 23981
||| || || || | ||| | ||||| | ||||| ||| || || || ||
Sbjct 28775 AGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTT 28716
Query 23982 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|||||||| | |||||| |||||||||||| ||| ||||| ||
Sbjct 28715 CCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 28668
>seq307
Length=48190
Score = 325 bits (360), Expect = 4e-84
Identities = 606/888 (68%), Gaps = 20/888 (2%)
Strand=Plus/Minus
Query 23158 TTTTAAAAATCTTCATCTAAAGTGAA--------TTTCACTG-CTTTATCACTATTCATA 23208
||||| ||||||||||| |||||||| |||| ||| ||| | | || ||||
Sbjct 40065 TTTTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATA 40006
Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268
||||| |||||| || || ||| | |||||||||| || || ||||| | ||
Sbjct 40005 ACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAG 39946
Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA-- 23326
|| ||||||||||| ||||| ||||| |||| | ||| || || || | || ||
Sbjct 39945 GAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAAC----TTTCTTGTTACC 39890
Query 23327 --ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384
| | ||| | ||||| || ||| |||||| ||||||||||||||| ||| ||||
Sbjct 39889 CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTT 39830
Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444
||||| | || ||||||| |||||| || || |||||||| ||||||
Sbjct 39829 CATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGC 39770
Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504
|| ||| || | ||| || |||| | ||| | || || | |||||
Sbjct 39769 TTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAA 39710
Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564
||||| ||||||||| ||||| |||||||| |||| ||||||||||| || || ||
Sbjct 39709 CAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGT 39650
Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624
|| |||||||| || |||| ||||| | ||| || || | ||||||||| || ||
Sbjct 39649 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAA 39590
Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684
||||||||| |||| ||| ||||| || || | | | | || || |||| | |||
Sbjct 39589 GAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATC 39530
Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744
||||||||| | | ||| | ||| ||| | | ||| ||| ||||||| ||
Sbjct 39529 TTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGC 39470
Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804
|| || | ||| ||||| ||| | | ||| || ||||||| |||| |||
Sbjct 39469 ATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATA 39410
Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864
||||||||||||||| ||||| || || || || ||||| || || ||||||| |
Sbjct 39409 CATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGG 39350
Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
|| ||| || || | |||| ||| | || ||||| ||||||||||||| |||
Sbjct 39349 CAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGC 39290
Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTT 23981
||| || || || | ||| | ||||| | ||||| ||| || || || ||
Sbjct 39289 AGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTT 39230
Query 23982 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|||||||| | |||||| |||||||||||| ||| ||||| ||
Sbjct 39229 CCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 39182
>seq124
Length=102737
Score = 188 bits (208), Expect = 7e-43
Identities = 562/856 (66%), Gaps = 21/856 (2%)
Strand=Plus/Plus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
|||| || ||||| || ||||| | || |||||||||||||| ||||||||||||||||
Sbjct 21110 TTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAATGGATTAG 21169
Query 23300 AAGTATTATATACAGCTTTACATGAT--AATTCCTTTAAAAGCCTATCTGCTACAA-ATT 23356
||||| | | ||| ||| | || | || | ||||| || |||| |||
Sbjct 21170 TCACGTTATA-ATA-CTTATCATTACCAAAAGCAACCAACAATCTATCGGC-ACAATATT 21226
Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416
| | ||||||||||||||||||| | || ||||| | | ||||||| |||||||
Sbjct 21227 CCACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCATCAC 21286
Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCAC 23476
||| | |||||||| |||||| || | || || | | |||| |
Sbjct 21287 TGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAATCTTTTCTATAATGGAAGGAT 21346
Query 23477 TAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCAT 23536
|| || | || || ||| | |||||| ||| |||| || | ||||| |
Sbjct 21347 CCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTCGT 21406
Query 23537 CCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCC 23596
|||||| ||||||||||| || || ||||| |||||||| || |||| |||||| | ||
Sbjct 21407 CCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAACC 21466
Query 23597 AAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAA 23656
|||| || | ||| ||||| || |||||||| || |||| ||| ||||| ||||| |
Sbjct 21467 AAAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCACCA 21526
Query 23657 GACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTT-- 23714
| | |||| || | | || ||||||| | | | ||||| || ||
Sbjct 21527 ATCTTTCTGCAAACAAGGCTTCTTCGTCTTGAATCCATCTAATAGCCCAATCTGCTTTTT 21586
Query 23715 ---CAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT 23771
|||| | | | ||| | ||||| || || || | ||| || | |
Sbjct 21587 CACCAATGT-----ATTTAATATTGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGG 21641
Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831
||| | | || || ||||||| | ||| |||| ||||| |||||||| ||
Sbjct 21642 ATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGATATTTTCCATCAT 21701
Query 23832 AATCTGAAACCCATAAAAACATC-TAGCTTCAGACAATTGAACATCATTAAAAAATCTTT 23890
||||| || | ||| || | | ||||||| | || ||| ||| || |||| |||
Sbjct 21702 GATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTT 21760
Query 23891 TAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTA 23950
| | || ||||| || || |||||||| |||||||| || || | ||| | |
Sbjct 21761 CAACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGA 21820
Query 23951 TAAAATGTCTTTCATC--AGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAAT 24007
| ||| ||||||||| || || | |||| |||||||| || |||||| || |
Sbjct 21821 TGAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAATCATCAAAATCTTTACTCAAGT 21880
Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
||| ||| || |||||||||| ||| | | ||| || | |||||| |||
Sbjct 21881 CAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAG 21940
Query 24068 TATGTTGTATTGGAAA 24083
|| || |||||||||
Sbjct 21941 GATATTTTATTGGAAA 21956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521485607673800
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