Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq259 208 1e-48 seq132 208 1e-48 seq166 96.9 5e-15 seq283 84.2 3e-11 >seq259 Length=87679 Score = 208 bits (230), Expect = 1e-48 Identities = 391/569 (69%), Gaps = 33/569 (6%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || | | Sbjct 63060 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAG 63119 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 |||| || | |||| || ||||| ||||| ||||| | || || | || | Sbjct 63120 ATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAAT 63179 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | || || ||||| | ||| | | || | |||| |||||||||||| | ||| | | Sbjct 63180 TAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTG 63239 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCA------CAGACA 50706 || ||| | ||||||||| |||||||| || |||||||| |||| | |||| | Sbjct 63240 ATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGTTAATTTCCCAGAAA 63299 Query 50707 ATGTT---------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCG 50757 | | | ||||| ||| || ||||| ||||| |||||||||||| || | Sbjct 63300 ACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAG 63359 Query 50758 TTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATA 50817 ||||||||||| | ||||| || ||||| ||||| | |||| ||||| | || |||| Sbjct 63360 TTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCTCATGTGGTTGATA 63419 Query 50818 TGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCG 50877 || | || |||||||||||||| | || || ||||| | || | ||||| || | Sbjct 63420 TGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTTGGATCATGTGG 63479 Query 50878 ATGCTTTAAAGGAGCAA-TTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAA 50935 ||||||| || || ||| |||| |||| ||| | || | ||| || ||||| Sbjct 63480 ATGCTTTGAAAGAACAACTTGA-ACGAATTCCAAAACAATTTCCTAAATTAGTTATTAAA 63538 Query 50936 GAA---AAAATCGATCGAACTAAGA---------GATTTTAAATTTGAAGA-TTTCGAAT 50982 ||| | || ||| ||| ||| | ||||| | |||||||| |||| ||| Sbjct 63539 GAAGATAGAAAAGAT-GAAATAAAATCAATCGACGATTTCGAGTTTGAAGATTTTCAAAT 63597 Query 50983 TGTTGGATTACGATCCTCATCCTTCTATT 51011 ||||||| ||||| || ||||| | ||| Sbjct 63598 TGTTGGA-TACGAACCATATCCTCCAATT 63625 >seq132 Length=62843 Score = 208 bits (230), Expect = 1e-48 Identities = 391/569 (69%), Gaps = 33/569 (6%) Strand=Plus/Minus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || | | Sbjct 30769 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAG 30710 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 |||| || | |||| || ||||| ||||| ||||| | || || | || | Sbjct 30709 ATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAAT 30650 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | || || ||||| | ||| | | || | |||| |||||||||||| | ||| | | Sbjct 30649 TAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTG 30590 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCA------CAGACA 50706 || ||| | ||||||||| |||||||| || |||||||| |||| | |||| | Sbjct 30589 ATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGTTAATTTCCCAGAAA 30530 Query 50707 ATGTT---------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCG 50757 | | | ||||| ||| || ||||| ||||| |||||||||||| || | Sbjct 30529 ACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAG 30470 Query 50758 TTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATA 50817 ||||||||||| | ||||| || ||||| ||||| | |||| ||||| | || |||| Sbjct 30469 TTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCTCATGTGGTTGATA 30410 Query 50818 TGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCG 50877 || | || |||||||||||||| | || || ||||| | || | ||||| || | Sbjct 30409 TGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTTGGATCATGTGG 30350 Query 50878 ATGCTTTAAAGGAGCAA-TTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAA 50935 ||||||| || || ||| |||| |||| ||| | || | ||| || ||||| Sbjct 30349 ATGCTTTGAAAGAACAACTTGA-ACGAATTCCAAAACAATTTCCTAAATTAGTTATTAAA 30291 Query 50936 GAA---AAAATCGATCGAACTAAGA---------GATTTTAAATTTGAAGA-TTTCGAAT 50982 ||| | || ||| ||| ||| | ||||| | |||||||| |||| ||| Sbjct 30290 GAAGATAGAAAAGAT-GAAATAAAATCAATCGACGATTTCGAGTTTGAAGATTTTCAAAT 30232 Query 50983 TGTTGGATTACGATCCTCATCCTTCTATT 51011 ||||||| ||||| || ||||| | ||| Sbjct 30231 TGTTGGA-TACGAACCATATCCTCCAATT 30204 >seq166 Length=47476 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948 ||||||||||| ||||| |||||| || | | ||| || | || |||||||| ||| Sbjct 45466 CCCTTTTCATCAGGTAAAGAAATTTCGATTTGAATTTCAAATCTACCTGGTCTTAACAAT 45407 Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008 || |||||||| || | ||||||||||| || | |||||| || || || Sbjct 45406 GCAGTATCAATTAAATCCAAACGATTGGTCATACCAATAACTAAAATATTATTCAATTGA 45347 Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || ||||| || ||||| || |||||||||||||| || Sbjct 45346 TCAACACCATCCATTTTGGATAATAATTGATTGACAAC 45309 >seq283 Length=47260 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 63716 TCGTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTT 63775 |||| ||| | | | | ||| | | || || || |||| ||||||||||||||||| | Sbjct 20511 TCGTCAAAGTTAGAATGAGAACAACCAAGATTCCGCAAATTGGTGATAAATTTGCTTC-T 20569 Query 63776 TTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACC 63834 ||| | |||||| ||||| ||| | | |||| |||| ||||||||||| || | Sbjct 20570 AGACATGGTCAAAAGGGTACTATTGGGGTTACTTATAGACATGAAGATATGCCATTCAGT 20629 Query 63835 AAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894 ||| ||||| || || ||| | | ||||| || || ||| |||| |||||||| Sbjct 20630 GCAGAAGGTATTGTCCCAGATTTGATTATCAACCCTCATGCTATTCCATCCCGTATGACA 20689 Query 63895 GTT 63897 ||| Sbjct 20690 GTT 20692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667072139792520