Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq259 208 1e-48
seq132 208 1e-48
seq166 96.9 5e-15
seq283 84.2 3e-11
>seq259
Length=87679
Score = 208 bits (230), Expect = 1e-48
Identities = 391/569 (69%), Gaps = 33/569 (6%)
Strand=Plus/Plus
Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532
|||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || | |
Sbjct 63060 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAG 63119
Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592
|||| || | |||| || ||||| ||||| ||||| | || || | || |
Sbjct 63120 ATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAAT 63179
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| || || ||||| | ||| | | || | |||| |||||||||||| | ||| | |
Sbjct 63180 TAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTG 63239
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCA------CAGACA 50706
|| ||| | ||||||||| |||||||| || |||||||| |||| | |||| |
Sbjct 63240 ATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGTTAATTTCCCAGAAA 63299
Query 50707 ATGTT---------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCG 50757
| | | ||||| ||| || ||||| ||||| |||||||||||| || |
Sbjct 63300 ACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAG 63359
Query 50758 TTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATA 50817
||||||||||| | ||||| || ||||| ||||| | |||| ||||| | || ||||
Sbjct 63360 TTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCTCATGTGGTTGATA 63419
Query 50818 TGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCG 50877
|| | || |||||||||||||| | || || ||||| | || | ||||| || |
Sbjct 63420 TGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTTGGATCATGTGG 63479
Query 50878 ATGCTTTAAAGGAGCAA-TTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAA 50935
||||||| || || ||| |||| |||| ||| | || | ||| || |||||
Sbjct 63480 ATGCTTTGAAAGAACAACTTGA-ACGAATTCCAAAACAATTTCCTAAATTAGTTATTAAA 63538
Query 50936 GAA---AAAATCGATCGAACTAAGA---------GATTTTAAATTTGAAGA-TTTCGAAT 50982
||| | || ||| ||| ||| | ||||| | |||||||| |||| |||
Sbjct 63539 GAAGATAGAAAAGAT-GAAATAAAATCAATCGACGATTTCGAGTTTGAAGATTTTCAAAT 63597
Query 50983 TGTTGGATTACGATCCTCATCCTTCTATT 51011
||||||| ||||| || ||||| | |||
Sbjct 63598 TGTTGGA-TACGAACCATATCCTCCAATT 63625
>seq132
Length=62843
Score = 208 bits (230), Expect = 1e-48
Identities = 391/569 (69%), Gaps = 33/569 (6%)
Strand=Plus/Minus
Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532
|||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || | |
Sbjct 30769 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAG 30710
Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592
|||| || | |||| || ||||| ||||| ||||| | || || | || |
Sbjct 30709 ATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAAT 30650
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| || || ||||| | ||| | | || | |||| |||||||||||| | ||| | |
Sbjct 30649 TAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTG 30590
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCA------CAGACA 50706
|| ||| | ||||||||| |||||||| || |||||||| |||| | |||| |
Sbjct 30589 ATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGTTAATTTCCCAGAAA 30530
Query 50707 ATGTT---------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCG 50757
| | | ||||| ||| || ||||| ||||| |||||||||||| || |
Sbjct 30529 ACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAG 30470
Query 50758 TTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATA 50817
||||||||||| | ||||| || ||||| ||||| | |||| ||||| | || ||||
Sbjct 30469 TTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCTCATGTGGTTGATA 30410
Query 50818 TGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCG 50877
|| | || |||||||||||||| | || || ||||| | || | ||||| || |
Sbjct 30409 TGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTTGGATCATGTGG 30350
Query 50878 ATGCTTTAAAGGAGCAA-TTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAA 50935
||||||| || || ||| |||| |||| ||| | || | ||| || |||||
Sbjct 30349 ATGCTTTGAAAGAACAACTTGA-ACGAATTCCAAAACAATTTCCTAAATTAGTTATTAAA 30291
Query 50936 GAA---AAAATCGATCGAACTAAGA---------GATTTTAAATTTGAAGA-TTTCGAAT 50982
||| | || ||| ||| ||| | ||||| | |||||||| |||| |||
Sbjct 30290 GAAGATAGAAAAGAT-GAAATAAAATCAATCGACGATTTCGAGTTTGAAGATTTTCAAAT 30232
Query 50983 TGTTGGATTACGATCCTCATCCTTCTATT 51011
||||||| ||||| || ||||| | |||
Sbjct 30231 TGTTGGA-TACGAACCATATCCTCCAATT 30204
>seq166
Length=47476
Score = 96.9 bits (106), Expect = 5e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948
||||||||||| ||||| |||||| || | | ||| || | || |||||||| |||
Sbjct 45466 CCCTTTTCATCAGGTAAAGAAATTTCGATTTGAATTTCAAATCTACCTGGTCTTAACAAT 45407
Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008
|| |||||||| || | ||||||||||| || | |||||| || || ||
Sbjct 45406 GCAGTATCAATTAAATCCAAACGATTGGTCATACCAATAACTAAAATATTATTCAATTGA 45347
Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046
|| ||||| || ||||| || |||||||||||||| ||
Sbjct 45346 TCAACACCATCCATTTTGGATAATAATTGATTGACAAC 45309
>seq283
Length=47260
Score = 84.2 bits (92), Expect = 3e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 63716 TCGTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTT 63775
|||| ||| | | | | ||| | | || || || |||| ||||||||||||||||| |
Sbjct 20511 TCGTCAAAGTTAGAATGAGAACAACCAAGATTCCGCAAATTGGTGATAAATTTGCTTC-T 20569
Query 63776 TTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACC 63834
||| | |||||| ||||| ||| | | |||| |||| ||||||||||| || |
Sbjct 20570 AGACATGGTCAAAAGGGTACTATTGGGGTTACTTATAGACATGAAGATATGCCATTCAGT 20629
Query 63835 AAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894
||| ||||| || || ||| | | ||||| || || ||| |||| ||||||||
Sbjct 20630 GCAGAAGGTATTGTCCCAGATTTGATTATCAACCCTCATGCTATTCCATCCCGTATGACA 20689
Query 63895 GTT 63897
|||
Sbjct 20690 GTT 20692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667072139792520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |