Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 190 2e-43
>seq1
Length=2377843
Score = 190 bits (210), Expect = 2e-43
Identities = 447/671 (67%), Gaps = 4/671 (1%)
Strand=Plus/Plus
Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722
|||||| | |||||||||| ||| | |||||||||||||| ||||| || | |
Sbjct 1803915 AACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAA 1803974
Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780
|| ||||| ||||||||||| || || |||||| | || ||| || | | |||||
Sbjct 1803975 GGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTG-TTACCCA 1804033
Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840
|| | | ||||||||| || ||| |||| | |||||| ||||| || || ||||||
Sbjct 1804034 AG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTC 1804092
Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900
|| || | | | || |||||||| || || ||| || || || | | |||| |||
Sbjct 1804093 ATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCT 1804152
Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960
|| |||||| | |||| ||| || ||| | |||| | || |||| |
Sbjct 1804153 TCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAAC 1804212
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
| ||| || ||||| |||||| || || ||||| | ||| | ||| || || || |||
Sbjct 1804213 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTC 1804272
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
|| || |||||| |||| || || ||||| || || | || || || ||| |||
Sbjct 1804273 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAG 1804332
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| ||||| || | | ||||| || | |||| ||| || || || ||||| |
Sbjct 1804333 AAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCT 1804392
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200
|||||||||| |||| || ||||| | | || || || |||| |||||
Sbjct 1804393 TGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCA 1804452
Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260
||||| || || ||| ||| |||| | | ||| || || || | || |||
Sbjct 1804453 TTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATAC 1804512
Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320
||||| || || ||||| ||||| || || || || || || || ||||| |
Sbjct 1804513 ATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGC 1804572
Query 17321 ATTTGAACTTC 17331
| ||| |||||
Sbjct 1804573 AGTTGGACTTC 1804583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544629602000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |