Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 190 2e-43 >seq1 Length=2377843 Score = 190 bits (210), Expect = 2e-43 Identities = 447/671 (67%), Gaps = 4/671 (1%) Strand=Plus/Plus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||||||||| ||| | |||||||||||||| ||||| || | | Sbjct 1803915 AACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAA 1803974 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780 || ||||| ||||||||||| || || |||||| | || ||| || | | ||||| Sbjct 1803975 GGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTG-TTACCCA 1804033 Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840 || | | ||||||||| || ||| |||| | |||||| ||||| || || |||||| Sbjct 1804034 AG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTC 1804092 Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900 || || | | | || |||||||| || || ||| || || || | | |||| ||| Sbjct 1804093 ATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCT 1804152 Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960 || |||||| | |||| ||| || ||| | |||| | || |||| | Sbjct 1804153 TCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAAC 1804212 Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 | ||| || ||||| |||||| || || ||||| | ||| | ||| || || || ||| Sbjct 1804213 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTC 1804272 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 || || |||||| |||| || || ||||| || || | || || || ||| ||| Sbjct 1804273 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAG 1804332 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||| || | | ||||| || | |||| ||| || || || ||||| | Sbjct 1804333 AAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCT 1804392 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 |||||||||| |||| || ||||| | | || || || |||| ||||| Sbjct 1804393 TGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCA 1804452 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 ||||| || || ||| ||| |||| | | ||| || || || | || ||| Sbjct 1804453 TTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATAC 1804512 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 ||||| || || ||||| ||||| || || || || || || || ||||| | Sbjct 1804513 ATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGC 1804572 Query 17321 ATTTGAACTTC 17331 | ||| ||||| Sbjct 1804573 AGTTGGACTTC 1804583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544629602000