Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1 262 4e-65
>seq1
Length=2377843
Score = 262 bits (290), Expect = 4e-65
Identities = 601/896 (67%), Gaps = 19/896 (2%)
Strand=Plus/Plus
Query 15892 TTTAGAAGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTT 15951
|||||| |||||| | ||||||||||| ||| | |||||||| ||||| |||||
Sbjct 1803906 TTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTT 1803965
Query 15952 TCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAA-TATCTT 16008
|| | || || ||||||||||| ||||| || || |||||| | || ||| | ||||
Sbjct 1803966 ACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTT 1804025
Query 16009 AGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAA 16068
||||| || ||| ||||||||| || ||| |||| | |||||||||||| ||
Sbjct 1804026 GT--TACCCAAGGCAAATAA-TAATCTATCAGCAACATATTCAACATATTGACACATCAA 1804082
Query 16069 GTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTAT 16128
||| || || || || | | || |||||||| | || ||| ||| || ||| |
Sbjct 1804083 GTCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAAC 1804142
Query 16129 CACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTC---AGACGGTGTATGGTTTAG 16185
|||| ||||| ||| || | | | |||| ||| ||| | || | |
Sbjct 1804143 ATCAACAGCTTCAACAATAATCT---TTTCAACAATTTCTGGAGATGGTCTGTGTTGCAA 1804199
Query 16186 GTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTC 16245
||| |||| | ||| || || || ||||| ||||| ||||| | ||| | |||
Sbjct 1804200 GTGGGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTC 1804259
Query 16246 GTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA 16305
||||| ||||| || |||||||| |||| || || |||||||| || | ||||||
Sbjct 1804260 ATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAA 1804319
Query 16306 TGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGT 16365
||| || ||||| ||||| |||| || |||||||| | |||| ||| || ||
Sbjct 1804320 TGAACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAA 1804379
Query 16366 AGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCAT 16425
||||||||||| |||||||||| ||||||| ||||| | | ||||| ||
Sbjct 1804380 AGCATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 1804439
Query 16426 CGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAAT 16485
|||| ||||| |||||||| || ||| || || | | ||| || |||||
Sbjct 1804440 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 1804499
Query 16486 CAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCA 16545
| |||| |||||||| || || ||||| || || || || || |||||||| |
Sbjct 1804500 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 1804559
Query 16546 TCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGAT 16605
| ||| || | | ||| ||||| | |||| ||| || ||| ||| || ||
Sbjct 1804560 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 1804619
Query 16606 ACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTC---GTCAGA 16662
||| ||| ||||| ||||| || || | || |||||| |||| ||| |
Sbjct 1804620 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATCTTTCATTGTC--A 1804677
Query 16663 TGTAA--GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAA 16720
| ||| | | |||||| | |||||||| || ||| |||||||| |||||
Sbjct 1804678 TTTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 1804737
Query 16721 AAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
||| || | || |||||||| | ||||| || |||| |||| || |||||
Sbjct 1804738 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 1804793
Score = 122 bits (134), Expect = 9e-23
Identities = 341/514 (66%), Gaps = 12/514 (2%)
Strand=Plus/Minus
Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961
||||| ||||||||||||| || | ||||| ||||| || ||||| || | ||
Sbjct 1025735 ACACCAGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAG 1025676
Query 15962 GATATATTTTCCATAAAATCAAAGGGATTAGT-AGCTGAAAATATCTTA-GAGTACCCCA 16019
|||||||||||||| |||||||| |||||||| | | | |||| |||| | |||| |
Sbjct 1025675 GATATATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATA-CTTATCATTACCAAA 1025617
Query 16020 GTTCCGTAACTAATCTATCTGCTACAA-ATTCTATATATTGACACATTAAGTCGCAATTA 16078
||| |||||||| || |||| |||| | |||||||||||| || || |||||
Sbjct 1025616 AGCAACCAAC-AATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTC 1025559
Query 16079 ATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCT 16138
|| || | | || ||||| || | | || | | | ||| || ||| |||
Sbjct 1025558 ATACCCAACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCT 1025499
Query 16139 TCTTTAATGATATCGGTGGCTCGTGTTTCAG---ACGGTGTATGGTTTAGGTGTTTAAAC 16195
|| | ||||| | || | || ||| ||| | | || | |||
Sbjct 1025498 TC---AGTGATAATCTTTTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGAAAAT 1025442
Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255
| || ||| || | ||| || | |||||||| || | ||| | ||| || || |||
Sbjct 1025441 AGTAAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAA 1025382
Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315
||||| |||||||| |||| ||| || |||||||| || | ||| ||||||||
Sbjct 1025381 GTTAAACCTGGCATCAACCCTCTTTTTTTCAACCAGAAAATGGAAGCGAATGACCCACTG 1025322
Query 16316 AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTA 16375
||||| || || |||| || ||||| || | |||| ||| || || || ||||
Sbjct 1025321 AAGAAAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCG 1025262
Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTT 16409
| |||||||| | |||| || |||||||
Sbjct 1025261 TCTTGAATCCATCTAATAGCCCAATCTGCTTTTT 1025228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413441098000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |