Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 203 2e-47 >seq1 Length=2377843 Score = 203 bits (224), Expect = 2e-47 Identities = 454/677 (67%), Gaps = 25/677 (4%) Strand=Plus/Plus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||| | |||||| | ||||| | ||| | ||||||||| || |||||||| ||||| || Sbjct 1090314 TTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAATAAATTC 1090373 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| | | || | |||||||||||||| |||||| | || |||| |||||| Sbjct 1090374 ACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAAT 1090433 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852 ||| || || ||||| || ||||||||| ||||| ||||||| | ||| || | Sbjct 1090434 GTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGATAATTT 1090493 Query 101853 ---------GCTTTCCATCACAG--ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901 | |||| | | ||||| ||||||| || |||||||| || || || Sbjct 1090494 AGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGGAGGTAA 1090553 Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961 |||||||| || |||| |||||| |||| ||| | || |||||||| || Sbjct 1090554 AGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGG 1090613 Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021 ||| | |||| | | ||| | | || || || ||| |||| ||| ||||||| Sbjct 1090614 GTTGGACTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATC 1090673 Query 102022 GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081 || | |||||||||| || || || || ||||| || || ||||| || ||||| Sbjct 1090674 AGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCC 1090733 Query 102082 AAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATT 102141 | ||| |||||| | | | || || | ||||||||||| | ||||||||| Sbjct 1090734 CAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATT 1090793 Query 102142 CGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTG 102199 | |||||||| | || || | || | | | | || || || || ||||| Sbjct 1090794 ACCTTCCCAAATTTTAACACCTTTGTTGGTTA-AAATTTTAGC-ATCGGTTGATCCAGCA 1090851 Query 102200 ATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259 |||||||| || | ||| | || | |||| | |||| ||| |||| |||||||| | | Sbjct 1090852 ATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAAT 1090911 Query 102260 GGAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTTCCA-AAAATACTCAGT--GTT 102313 |||||| |||||| |||| ||| || | |||| | | ||| | | | | ||| Sbjct 1090912 GGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTGATTTAGTT 1090971 Query 102314 CCAGTCCCTGTTCTGTC 102330 || || ||||||| ||| Sbjct 1090972 CCTGTTCCTGTTCGGTC 1090988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250539587650