Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1 203 2e-47
>seq1
Length=2377843
Score = 203 bits (224), Expect = 2e-47
Identities = 454/677 (67%), Gaps = 25/677 (4%)
Strand=Plus/Plus
Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736
||| | |||||| | ||||| | ||| | ||||||||| || |||||||| ||||| ||
Sbjct 1090314 TTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAATAAATTC 1090373
Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796
||| | | || | |||||||||||||| |||||| | || |||| ||||||
Sbjct 1090374 ACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAAT 1090433
Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852
||| || || ||||| || ||||||||| ||||| ||||||| | ||| || |
Sbjct 1090434 GTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGATAATTT 1090493
Query 101853 ---------GCTTTCCATCACAG--ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901
| |||| | | ||||| ||||||| || |||||||| || || ||
Sbjct 1090494 AGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGGAGGTAA 1090553
Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961
|||||||| || |||| |||||| |||| ||| | || |||||||| ||
Sbjct 1090554 AGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGG 1090613
Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021
||| | |||| | | ||| | | || || || ||| |||| ||| |||||||
Sbjct 1090614 GTTGGACTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATC 1090673
Query 102022 GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081
|| | |||||||||| || || || || ||||| || || ||||| || |||||
Sbjct 1090674 AGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCC 1090733
Query 102082 AAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATT 102141
| ||| |||||| | | | || || | ||||||||||| | |||||||||
Sbjct 1090734 CAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATT 1090793
Query 102142 CGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTG 102199
| |||||||| | || || | || | | | | || || || || |||||
Sbjct 1090794 ACCTTCCCAAATTTTAACACCTTTGTTGGTTA-AAATTTTAGC-ATCGGTTGATCCAGCA 1090851
Query 102200 ATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259
|||||||| || | ||| | || | |||| | |||| ||| |||| |||||||| | |
Sbjct 1090852 ATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAAT 1090911
Query 102260 GGAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTTCCA-AAAATACTCAGT--GTT 102313
|||||| |||||| |||| ||| || | |||| | | ||| | | | | |||
Sbjct 1090912 GGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTGATTTAGTT 1090971
Query 102314 CCAGTCCCTGTTCTGTC 102330
|| || ||||||| |||
Sbjct 1090972 CCTGTTCCTGTTCGGTC 1090988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250539587650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |