Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 446 2e-120
seq21 154 2e-32
>seq1
Length=2377843
Score = 446 bits (494), Expect = 2e-120
Identities = 1378/2110 (65%), Gaps = 55/2110 (3%)
Strand=Plus/Plus
Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858
||||| | || |||||||| | || || || | || || | | |||||||| ||
Sbjct 1847337 TTGTCAATAGTAAATTGAATAGCGGCAGAAGCAGCTTGAGTTCTCAAGTAGTACATACCA 1847396
Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918
|| || | ||| |||| || || |||||||||||||| | ||| | | |||
Sbjct 1847397 GTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTACCCATAGTTGGA 1847456
Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978
||| || || ||||||| ||||||| |||||| ||||| || | || || ||||||
Sbjct 1847457 TCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCC 1847516
Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038
|| | ||||| ||||||| ||||||||||| ||| || || | ||| || ||
Sbjct 1847517 ATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCA 1847576
Query 53039 TCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095
||||| | ||||| | || || || ||| | ||||| || |||| ||
Sbjct 1847577 TCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTGGAAATAATGTTACTCTTCATA 1847636
Query 53096 TCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 53154
|||||||||| ||| | || ||| | | | | | ||||| || | |||
Sbjct 1847637 GCATCATTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTG 1847695
Query 53155 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 53214
||||| |||| ||| ||||| | || |||||| || || || ||||| | | | ||
Sbjct 1847696 GAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTC 1847755
Query 53215 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 53274
||| || ||||| ||||| | ||| || ||||| ||||| || || ||||| || ||
Sbjct 1847756 ATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTT 1847815
Query 53275 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 53332
||| | ||| ||||| | || || | ||| | || ||||||| ||| | || |
Sbjct 1847816 TCTCAAACC--ATGTTTGGCCATCTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTT 1847873
Query 53333 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 53392
||| ||||| | ||| | | || || ||| ||
Sbjct 1847874 GGTTTTCTGTTCCACAAGTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGTAA 1847933
Query 53393 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 53452
| || || ||||| | |||||| |||| | | || | ||| | | |||
Sbjct 1847934 CTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAA 1847993
Query 53453 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 53512
|||||||| ||||| | | |||| ||| ||||| | ||||||||| ||| |
Sbjct 1847994 ATGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGC-AATCT 1848052
Query 53513 AAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 53571
| ||| ||||| || || ||||| ||||||||||| | | | || ||||| |||||| |
Sbjct 1848053 CAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCAT 1848112
Query 53572 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631
|||||| ||||||||||||||| || || || ||| ||| |||| | | || | |||
Sbjct 1848113 ATTAGATCTTTCAGCTTCTGGAACTGGGTAGTAGTTACGATCGATAACTCTGTTCAAGTT 1848172
Query 53632 TC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAA--ATTG-- 53679
| |||||| |||| || || | || ||| ||| | ||| ||||
Sbjct 1848173 ACGAGTGACAA---CTTTAGTAACTTCATGCAATTTTTCAAAGTTATACCAAGTATTGCT 1848229
Query 53680 TCCATC-TATT--ACAAAC-ATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735
| |||| | || ||||| ||| ||||||||| || |||| |||||||| || || |
Sbjct 1848230 TTCATCGTGTTCAACAAAAGATGG-CAATGCAATGGAAGCCAAGTTACAAACAGCAACTT 1848288
Query 53736 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795
||| | | | | ||||| | || ||| || | || | | |||||| || |
Sbjct 1848289 CATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTGATGACACCCA 1848348
Query 53796 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAG 53855
|||| | ||| ||| |||| ||||||| ||||| ||||| | || ||||| |||||||
Sbjct 1848349 AATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACATAAATGGAGTACCAG 1848408
Query 53856 TTTCAATCTGGG-ATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914
|||| | |||| | || | | | || | ||| | | || || || | ||||
Sbjct 1848409 TTTCGGTTTGGGCACTCAAGA-TAGCGTACCATAATTTTTGGGCTTTGAT----GGTTTG 1848463
Query 53915 TAT--CTCTTTTCTC--TTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAAC 53970
| | | | ||||| |||||||| ||||| ||| |||||| || || || | ||
Sbjct 1848464 TCTACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTCATCACCGTAGAC 1848523
Query 53971 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 54030
|| ||| || ||| ||||| ||| | | ||| | ||| || |||| | | ||
Sbjct 1848524 ATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACCGTTTTGTTCAAC 1848583
Query 54031 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 54090
|| ||||| || | ||| || ||||| | |||| || | ||||||| ||| |||
Sbjct 1848584 TCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTGGCTCTGATTTC 1848643
Query 54091 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 54150
|| || || |||||| ||| ||||| || | | |||||| ||||| |||||
Sbjct 1848644 TTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACTGTGCCATGGTTC 1848703
Query 54151 CAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 54210
|||||||| | | | | || || | ||||| || || ||||| | || | ||| ||
Sbjct 1848704 CAAGTATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGAGCAGT 1848763
Query 54211 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT 54270
||| || ||||||| | ||| ||||||||||| ||||| | |||||| || || | ||
Sbjct 1848764 GTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACCAGCAAT 1848823
Query 54271 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGA 54330
|| ||| ||| |||||| || || | ||| || || || || | || ||
Sbjct 1848824 GTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGA 1848883
Query 54331 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 54390
||||| || ||| ||| || ||||| || || || || || ||||||| ||||
Sbjct 1848884 AATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTTCATAGC 1848943
Query 54391 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 54450
||| | ||||| ||||||||| | | || || ||||| || || || ||
Sbjct 1848944 AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAACAAACATGGGGA 1849003
Query 54451 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC 54510
| |||| || || || ||| || | | ||| || || || ||| || |||||
Sbjct 1849004 ACCGTGTGTGAAATATCTTTGTGACATCAAATTATAAGTTTCAATAACTCTTGGAATATC 1849063
Query 54511 CCATTGA---TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 54567
|| | ||||| || | || || | ||| | | || || ||||||||| | |
Sbjct 1849064 ---TTTACCGTGAATACCAATAGCAACTCTCATAATTAAATGTTGTGGTCTTTCAGCAAC 1849120
Query 54568 CTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627
|| ||| || | ||| || ||| |||||| ||||| |||||||| ||||||||
Sbjct 1849121 TTTACCGTTGATACGTAACAAATATGATCTTTCCATGGTTTTGAAACCAAAGTAGTTGTA 1849180
Query 54628 --TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACT 54685
||||| |||| ||||||| |||| ||||||| | || ||| | || || | |
Sbjct 1849181 ATTGAAA--TCTCTGTCGTAAACAATAGCTGAGTTCAATTCATCTTCATGTTCCATGATA 1849238
Query 54686 ACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACAT 54743
| ||| || | ||| ||||| || ||||||||| ||| |||| || |||||||
Sbjct 1849239 ATATCATAAGT--TTCTTTAGAAATCATAGGAGAATGTAAACCAGTTTTTGGGTTGACAT 1849296
Query 54744 AGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 54803
| | ||||| | | |||| || |||| | |||| ||| |||| ||| |
Sbjct 1849297 ATTCGTATAAAGCTTGAGAAACTTTGGAGTATTGTTTGGTAGTTTGTTTATGTAAATTGG 1849356
Query 54804 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 54863
| || || ||||| || |||| || || ||||| ||||| ||||| ||| || |
Sbjct 1849357 AGACAGCGATTCTGGCTGCTAAAACAGCGTAATCTGGATGCACGGTAGTCATAGTAGCAG 1849416
Query 54864 CTATTTCGGC 54873
| ||||| ||
Sbjct 1849417 CAATTTCAGC 1849426
Score = 325 bits (360), Expect = 5e-84
Identities = 625/913 (68%), Gaps = 25/913 (3%)
Strand=Plus/Plus
Query 23818 TGTCTTC---TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAA 23874
||||||| || ||||||||| || ||||||||| ||| || | ||||||||||
Sbjct 1803896 TGTCTTCAGCTTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAA 1803955
Query 23875 AATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTAT 23934
| || |||||||| | || || |||||||||||||||||| |||| || |||||||| |
Sbjct 1803956 AGTTGGTTTTACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGT 1804015
Query 23935 AGA--TTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGT 23992
| | ||||| | | ||||| || | | |||||||| || ||| | || | ||||
Sbjct 1804016 AAACTTTCTTGTTA--CCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTG 1804073
Query 23993 TTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTC 24052
||||| ||||| ||||| || | | |||||||||||| |||| | | ||||
Sbjct 1804074 ACACATCAAGTCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTC 1804133
Query 24053 TTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTG 24108
|| ||||| | || || || | |||| ||||| || ||||| | |||
Sbjct 1804134 TTTTTCAACATCAACAGCTTCA---ACAATA-ATCTTTTCAACAATTTCTGGAGATGGTC 1804189
Query 24109 GATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTAC 24168
| || || |||| |||||| || ||||| |||| ||| || |||||||
Sbjct 1804190 TGTGTTGCAAGTGGGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTAC 1804249
Query 24169 TAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATA 24228
|| ||||| ||||| || || | || ||||| | || | |||||| | ||| || |
Sbjct 1804250 AGATCAATTCATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGA 1804309
Query 24229 TGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTT 24288
| || |||||||| ||| |||||||| ||||| | || ||||| |||| | |||||
Sbjct 1804310 TAGAAGCAAATGAACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTT 1804369
Query 24289 CTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTT 24343
| |||| | | | | || || ||||| ||||| ||||| || || ||||| |
Sbjct 1804370 CAGCATATAAAGCATCTTTATCTTGAATCCA--TTTGATGGCCCATTCAGCTTTCTTGGT 1804427
Query 24344 TACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 24403
| ||| || || | || || |||||||| | | | ||| | ||||||||
Sbjct 1804428 AATACATGGAATGTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAAC 1804487
Query 24404 ATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAA 24463
||| || ||||| || | | ||||||||| |||||||||||||| || ||||| ||
Sbjct 1804488 ATAAGTTTCAATTAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAA 1804547
Query 24464 TCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATT 24523
|| ||||| || |||| || | | || ||||| | |||| ||| || ||
Sbjct 1804548 ACCATAGAATGATTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTT 1804607
Query 24524 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 24583
|||| || || || ||| || || ||||| || || || | ||||||| |
Sbjct 1804608 TTCACCAACAATACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATCT 1804667
Query 24584 TTC---GTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 24640
||| ||| | | || |||||||||| | ||||||| || ||| ||||||||
Sbjct 1804668 TTCATTGTCATTTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTC 1804727
Query 24641 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 24700
||||| || || || || || |||||||| | ||||||||| |||||||||| |||
Sbjct 1804728 ACAAGTCCAGAAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAAT 1804787
Query 24701 TGGAAAAATAACA 24713
|||||| ||||||
Sbjct 1804788 TGGAAACATAACA 1804800
Score = 221 bits (244), Expect = 1e-52
Identities = 590/886 (67%), Gaps = 42/886 (5%)
Strand=Plus/Minus
Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904
||||||| ||| ||| | ||||| || ||||| |||||||| | || ||||||||||
Sbjct 1025725 TTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTT 1025666
Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT-CCCAATTCAGAAATC 23963
|||||||||| ||||||| || || ||||| || ||| | | | || || || | |
Sbjct 1025665 CCATGAAATCAAATGGATTAGTCACGTTATA-ATACTTATCATTACCAAAAGCAACCAAC 1025607
Query 23964 AATCTATCTGCGACAA-ACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
|||||||| || |||| | |||| |||| ||||| ||||||||||| || | |
Sbjct 1025606 AATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAA 1025548
Query 24023 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
||||||||| || || | ||| | ||||| ||||||| || || || || |||
Sbjct 1025547 AGAAACTGGAAGCGCATCACTGAAGTACTTCTT-TTCAATACTAACAGCTTCAGTGATA- 1025490
Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATAC----AAT-----AAATGTTTAAACATCA 24132
|||| ||||| | | | |||| | || || | | ||| | |
Sbjct 1025489 ---ATCT-----TTTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGAAAATAGTA 1025438
Query 24133 AACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGA 24192
|||| || ||||| ||| | ||| ||||| |||| || ||||| || || || || |
Sbjct 1025437 AACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTA 1025378
Query 24193 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGA 24252
|| ||||| | || | ||||| | ||| || ||||| || ||||| ||| ||||
Sbjct 1025377 AACCTGGCATCAACCCTCTTTTTTTCAACCAGAAAATGGAAGCGAATGACCCACTGAAGA 1025318
Query 24253 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGC-GCT--GTCAT 24309
|||| ||||| | || ||||| || | | ||||||| || | ||| || ||| |
Sbjct 1025317 AAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCTT 1025258
Query 24310 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT-----GTCTCTAT 24364
| ||||| | |||||||| || |||||| || ||| | ||| | || ||
Sbjct 1025257 GAATCCATCTAATAGCCCAAT----CTGCTTTTTCAC-CAATGTATTTAATATTGTCAAT 1025203
Query 24365 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 24424
|| || || | | | || ||| ||| || | || || ||||| |||||
Sbjct 1025202 GGCGTTGAACAAGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTAAAAGGGA 1025143
Query 24425 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC-TAGCCT 24483
||| |||| ||||| || ||||| || || || ||| ||| || || | | || |
Sbjct 1025142 ATATGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGTA-AACCAGCTTGGCTT 1025084
Query 24484 CGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 24543
| | || | ||||| ||||||| ||| | || |||||||| ||||| || ||
Sbjct 1025083 CAGGAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTG 1025024
Query 24544 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 24603
|| |||||||| || || || | || ||| || |||| ||| | | |||||
Sbjct 1025023 ATGCAGCAAAAAAGGCTAAAACTCTTGAGATGAAAAATCTTTCATCTTTATTCATTTTAT 1024964
Query 24604 T---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 24660
| |||||||| | ||||||| | || | |||||| ||||||||||||||||
Sbjct 1024963 TTTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAA 1024904
Query 24661 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 24706
| | || || || | | |||| || ||| |||||| ||||||||
Sbjct 1024903 CAGATTTCTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAAA 1024858
>seq21
Length=244291
Score = 154 bits (170), Expect = 2e-32
Identities = 1020/1619 (63%), Gaps = 63/1619 (4%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
|||||||| |||| || || | || ||||| | ||| ||||| || ||||| | |
Sbjct 7072 GTGAATTGGATGGCTCTTGACGCAGCTTGGGTACGCAAATAATACATACCAGTTTTCAAA 7131
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| | |||| | ||||| || || |||| ||| | | | || || || |
Sbjct 7132 CCTTGTTTCCAAGCATAAAAGTGACAGCTGGTTAATTTACCAAATGTTGGTTCACGTAAA 7191
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
|| ||||||||| ||| |||||| || || || || || || ||||| | ||
Sbjct 7192 TGAATATTCATACTTTGCAGTTGATCAATAAATTTACCTCTATCAGCTGCCATATCAATT 7251
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047
|| ||||| | ||||||||| | |||||||| | | || || |||| |||| |
Sbjct 7252 ATTACTTTTTGGGAAATTTCCCACACTGTTTTATACAATTCTTTGATGTCTTTGGGAATG 7311
Query 53048 TT---TGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104
| | |||| ||||| || ||| || | ||| || |||| | || | ||||
Sbjct 7312 CTCTGTATATTTTGAATGGAGCCATTTTCCATCATGATTTTATTTCTCATTGCTGAATTC 7371
Query 53105 CATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 53163
|| ||| | || | || || ||| | || | |||||| || || || |||||
Sbjct 7372 CA-AATACCCAAATCCATCAAGTCTTTAATTAAATACTTATTAACCACCTGGAACTCTCC 7430
Query 53164 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 53223
||||| || || || | || | ||| ||||| ||||| | | | |||||| |||
Sbjct 7431 TGACAACACCCTACGGTTATATAAATTTGATGTATAAGGTTCAAAACATTCATTAAATCC 7490
Query 53224 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 53283
|||||||| | || || || || ||||| ||||| ||||| | |||||| | ||
Sbjct 7491 TAAAATTTGTGAGGTGGAAGCTGTAGGCATTGGTGCAACCAAAAGGGAATTTCTTAACCC 7550
Query 53284 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 53343
|| || || | ||||| || | ||| | | | | ||||| |
Sbjct 7551 AAATTTTTGAATGCTTTCTTTGAGTTTATTCCAGTCGTACATCTTAGACGGAGTATGATT 7610
Query 53344 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 53403
|||||||||||| | | || |||||| | | || || |||||
Sbjct 7611 CCACATATCAAATTGTAGAATACCTTCAGATGCAGGTGATCCTTGAAAAGTTTCATATGG 7670
Query 53404 TCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCG 53461
||| || | || || |||| ||| || || | || | | || || |||||
Sbjct 7671 TCCGTCTTGAATAGATAATTCA--ACTGAAGCTTCAAGAGCCGCATGGTAGATTGTTTCA 7728
Query 53462 AAGATCTTCTTATTTAGAT--CTTGT-GCTTCCAGGCTATCAAATGGA----TAATTTAA 53514
|| |||| |||||| | || | ||||| | | |||||||| ||| ||
Sbjct 7729 AATATCTGAATATTTAATTTCCTAGCAGCTTCT--GAT-TCAAATGGTAGCCTAAGTTCG 7785
Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574
| |||||| |||||||| ||||||||||| | | || || | | | |||||
Sbjct 7786 GCAAATAAA----TCTGCTAACCCTTGAACACCCAAGGCAATTGGACGGTTACGTTTATT 7841
Query 53575 AGAGATTTCAGCT-TCTGGAATAGGATAATAAT-TAATATCTATAATTTTATTGAGGTTT 53632
||| ||| ||| ||| || |||||| |||| | | ||| || | ||| || | ||||
Sbjct 7842 TGAGTATTCGGCTGTCTC-AACAGGATA-TAATGTTACATCGATCACTTTGTTCAAGTTT 7899
Query 53633 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTC---------CA 53683
| | | || ||| ||| | ||||| |||||||| | | ||
Sbjct 7900 TTAGCCAACACCTTGGTGACAGAATGTAGTTTCTCGAAATCAAACTCTATTACTTCATCA 7959
Query 53684 TCTA----TTACAAACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737
|| || |||| | || ||||||| || | |||||||| || ||| ||
Sbjct 7960 TCGGATGTTTTCAAATACGTCGGTAATGCAAGGGACCCGAGATTACACACAGCTGTTTCT 8019
Query 53738 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797
| | | ||||| | || ||| ||| | ||| ||||||| || || |
Sbjct 8020 TCTGGTGATGAATATTCAACAATTTCACAGCACAAATTTGACGACTTGATTGTACCAAGG 8079
Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857
|||| ||||| |||| ||||| ||||| |||||||| || |||| ||| |||
Sbjct 8080 TTTTTCTGATTTGATTTTTCATTACAGGCATCTTTATAAAGCATATATGGGCCACCGGTT 8139
Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917
||| | || ||||||| ||| ||| ||| | | |||| |||| ||| | |
Sbjct 8140 TCAGTTTGTGATTCTAAAATTGCTAGCCATAGTTTATGAGCTCGTATTTTAGTTCCCAAA 8199
Query 53918 CTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGT 53975
| ||| ||||| | | | | |||||| || ||| || || || | ||||
Sbjct 8200 C-CTTGCTTCTCATACTTCTC----ATACAACTCTTTAAAATCATCACCGTATACATCAC 8254
Query 53976 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 54035
||||||||| |||| ||| ||||||| | ||| | | ||| | || || | ||
Sbjct 8255 TCAATCCAGGGGCTTCACTCGGTGACATCAATGTCCAATACTCATCAGCTTTTACCCTTT 8314
Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCG 54094
||| || | |||||||||||| | | | ||| |||| |||||| ||||| ||| ||
Sbjct 8315 GCATGAATAAATCAGGAATCCATA-ATCCATAGAATAAATCTCTAGTTCTTAATTCTTCA 8373
Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154
|||| ||| ||| | | || | | | | |||||| |||||| ||||| |
Sbjct 8374 CTTCCATGATTTTTTCTCATCTCTAAAATGTCAAAAATATCGCCATGCCAAGGTTCAATA 8433
Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214
|| || | | | | ||||| ||||| || ||||| || | |||| || |||||
Sbjct 8434 TAAATCGCAAAAGCACCAGGACGTTTACCACCACCCTGGTCGACATATCGTGCAGTGTTG 8493
Query 54215 TTATAAACTCTCAACATTGGAA-TAATACCATTGGATGCA---CCATTGGTCCCGGAGAT 54270
||| |||| | |||||||||| |||| ||||| |||| |||||||| || | ||
Sbjct 8494 TTAAAAACACGTAACATTGGAACTAAT-CCATT---TGCAATCCCATTGGTACCAGCAAT 8549
Query 54271 ATAGCTTCCACTGGCACGAATATTA-CTA-ATTGATAGACCTATCCCCCCTGCCATTTTA 54328
||| ||| ||| ||||| | | || || ||| ||| || ||||||| |||
Sbjct 8550 ATATGAACCATTGGAACGAACTTCATGTACATGGAT--ACCAATTCCCCCTGATGCTTTG 8607
Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 54387
|| |||||||| || | | || | |||||| || ||||| |||||| ||||
Sbjct 8608 GAAATTAATGCTGATTCGTGAAGGGTTTTATAGATTCCATCTATTGAATCATCTTTCAT 8666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720486772000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |