Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-45 >seq1 Length=2377843 Score = 197 bits (218), Expect = 1e-45 Identities = 420/625 (67%), Gaps = 19/625 (3%) Strand=Plus/Plus Query 97021 GGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCT 97080 ||| |||| ||| || ||| | | |||||| | |||| || ||| | ||||||||| Sbjct 1090294 GGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCA 1090353 Query 97081 CCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTT 97140 || | ||| ||||||||||| ||| | | | |||| ||||| || ||||| |||| Sbjct 1090354 CCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAATCATCTTAGTT 1090413 Query 97141 AATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGA 97200 || | || |||| ||||||||| ||||| || || | ||||||||| ||||| ||| Sbjct 1090414 AACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGA 1090473 Query 97201 TATAACTGACAGGAAA-------------GCTTTCCATCACAC--ACATAAAACTGACTC 97245 || || ||| || | | |||| | | ||||| || |||| Sbjct 1090474 TACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAA 1090533 Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305 || |||||||| || || || |||||||| || |||| |||||| |||| ||| Sbjct 1090534 AAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATG 1090593 Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365 | ||||||||||| |||||| | | || | ||||| || | | || |||||| Sbjct 1090594 ATTATTCTTCTATCATATGGGTTGGACTTTAATTTCTTAATGATATCTTGCAACTGATCA 1090653 Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 |||| |||| ||||| | | | ||| |||||| || ||||| || |||||| Sbjct 1090654 TAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCAT 1090713 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 ||||| |||||||| ||||| | || ||||| | || | || || | ||||||| Sbjct 1090714 TGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCT 1090773 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AGATGCTGCAAGCTCTT 97543 ||| | | ||||||||| | |||||||| | ||||| | || | || | || Sbjct 1090774 AAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACACCTTTGTTGGT-TAAAATTTT 1090832 Query 97544 TGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATA 97603 || || || ||||| |||||||| || ||||| | | | |||| | |||| | Sbjct 1090833 AGC-ATCGGTTGATCCAGCAATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGA 1090891 Query 97604 CTCTCTTAGTTGTTAAGAGAGGAAA 97628 || |||| || ||||| | ||||| Sbjct 1090892 CTTTCTTGGTAGTTAACAATGGAAA 1090916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783366035500