Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 1e-45
>seq1
Length=2377843
Score = 197 bits (218), Expect = 1e-45
Identities = 420/625 (67%), Gaps = 19/625 (3%)
Strand=Plus/Plus
Query 97021 GGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCT 97080
||| |||| ||| || ||| | | |||||| | |||| || ||| | |||||||||
Sbjct 1090294 GGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCA 1090353
Query 97081 CCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTT 97140
|| | ||| ||||||||||| ||| | | | |||| ||||| || ||||| ||||
Sbjct 1090354 CCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAATCATCTTAGTT 1090413
Query 97141 AATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGA 97200
|| | || |||| ||||||||| ||||| || || | ||||||||| ||||| |||
Sbjct 1090414 AACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGA 1090473
Query 97201 TATAACTGACAGGAAA-------------GCTTTCCATCACAC--ACATAAAACTGACTC 97245
|| || ||| || | | |||| | | ||||| || ||||
Sbjct 1090474 TACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAA 1090533
Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305
|| |||||||| || || || |||||||| || |||| |||||| |||| |||
Sbjct 1090534 AAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATG 1090593
Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365
| ||||||||||| |||||| | | || | ||||| || | | || ||||||
Sbjct 1090594 ATTATTCTTCTATCATATGGGTTGGACTTTAATTTCTTAATGATATCTTGCAACTGATCA 1090653
Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425
|||| |||| ||||| | | | ||| |||||| || ||||| || ||||||
Sbjct 1090654 TAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCAT 1090713
Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485
||||| |||||||| ||||| | || ||||| | || | || || | |||||||
Sbjct 1090714 TGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCT 1090773
Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AGATGCTGCAAGCTCTT 97543
||| | | ||||||||| | |||||||| | ||||| | || | || | ||
Sbjct 1090774 AAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACACCTTTGTTGGT-TAAAATTTT 1090832
Query 97544 TGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATA 97603
|| || || ||||| |||||||| || ||||| | | | |||| | |||| |
Sbjct 1090833 AGC-ATCGGTTGATCCAGCAATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGA 1090891
Query 97604 CTCTCTTAGTTGTTAAGAGAGGAAA 97628
|| |||| || ||||| | |||||
Sbjct 1090892 CTTTCTTGGTAGTTAACAATGGAAA 1090916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346783366035500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |