Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq5 109 1e-18 >seq5 Length=745199 Score = 109 bits (120), Expect = 1e-18 Identities = 138/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 135587 TTCCTATTTATACAGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTT 135646 ||| | ||| ||||||| || || ||||| || ||||||| || || |||||||||| Sbjct 540120 TTCGTGTTTGGACAGATATTGATGAATGGACAACTTGGAAAACAAGACTGGATCCTGTTT 540061 Query 135647 TGCATATAGAACTTAGGAGATGGGCGGATGTTTTTATTA-TAGCGCCCTTAACGGCAAAT 135705 | ||||| ||| | || |||||||| ||| | |||||| | || ||||| |||||| Sbjct 540060 TACATATTGAATTAAGAAGATGGGCTGAT-ATCTTATTAGTTTGTCCATTAACTGCAAAT 540002 Query 135706 ACGTTAGCAAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCC 135765 || || || ||||| || |||||||| ||||||||| | || | || | ||||| Sbjct 540001 ACTTTGGCTAAAATTTCTTTAGGTATATGTGATAATTTATTAACTAATGTTATCAGAGCT 539942 Query 135766 TGGGATA 135772 ||| ||| Sbjct 539941 TGGAATA 539935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923195069006000