Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 8e-41
>seq1
Length=2377843
Score = 181 bits (200), Expect = 8e-41
Identities = 474/718 (66%), Gaps = 39/718 (5%)
Strand=Plus/Minus
Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGG---AATGCAATCTCGATATAACT 20032
|||| ||||| ||||| ||||| ||| | |||| | |||| ||| | | |
Sbjct 1090990 CAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCACAATTAAGATTTGATT 1090931
Query 20033 TGAGAAATGA---ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTG 20089
| |||||| |||||| || |||||||| || || |||| ||||| | ||
Sbjct 1090930 TATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTTCTAAAGGTATCATTC 1090871
Query 20090 AAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAG---AAAAAG 20146
| || ||||||||||||||| |||||||| || ||| | || || | ||||
Sbjct 1090870 ATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTA---AAATTTTAACCAACAAAG 1090814
Query 20147 GAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA 20206
| ||||| |||||| | |||||||| | |||||| | | ||||| |||
Sbjct 1090813 GTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATT-GACT 1090755
Query 20207 -ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCT 20265
| |||| || || |||||||| || || ||||| || ||||||||||| ||||| |||
Sbjct 1090754 CATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCT 1090695
Query 20266 GAATATG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321
|||||| ||| ||| | ||||| ||||||||| ||||| || ||| |
Sbjct 1090694 GAATATAAAGATTGTGATG----CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGA 1090639
Query 20322 TGTTATTAATTTAATTAAAA-CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGA 20380
| | ||||| ||||||| | |||||| | || |||||||| || | | |||||||
Sbjct 1090638 TATCATTAAGA-AATTAAAGTCCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGA 1090580
Query 20381 ACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG 20440
| | |||| | | ||||||||| |||||||||||| | | || ||||| || |
Sbjct 1090579 ATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATG 1090520
Query 20441 TT---------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485
|| ||||| | |||| || ||| | ||||||| |||| ||
Sbjct 1090519 TTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTG 1090460
Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545
||||||| |||| ||||||||||| ||||| ||||| || | || | |||||||
Sbjct 1090459 ATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTG 1090400
Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605
| ||||| ||| | | ||||| || | || || || || || || || | |
Sbjct 1090399 CTCATGTGGTTGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGT 1090340
Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCC 20663
| | ||||| | || |||| ||| ||| | |||| ||||||||||| ||
Sbjct 1090339 ATTTGGATCATGTGGATGCTTTGAAAGAACAACTTGAACGAATTCCAAAACAATTTCC 1090282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183270241750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |