Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 181 8e-41 >seq1 Length=2377843 Score = 181 bits (200), Expect = 8e-41 Identities = 474/718 (66%), Gaps = 39/718 (5%) Strand=Plus/Minus Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGG---AATGCAATCTCGATATAACT 20032 |||| ||||| ||||| ||||| ||| | |||| | |||| ||| | | | Sbjct 1090990 CAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCACAATTAAGATTTGATT 1090931 Query 20033 TGAGAAATGA---ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTG 20089 | |||||| |||||| || |||||||| || || |||| ||||| | || Sbjct 1090930 TATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTTCTAAAGGTATCATTC 1090871 Query 20090 AAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAG---AAAAAG 20146 | || ||||||||||||||| |||||||| || ||| | || || | |||| Sbjct 1090870 ATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTA---AAATTTTAACCAACAAAG 1090814 Query 20147 GAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA 20206 | ||||| |||||| | |||||||| | |||||| | | ||||| ||| Sbjct 1090813 GTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATT-GACT 1090755 Query 20207 -ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCT 20265 | |||| || || |||||||| || || ||||| || ||||||||||| ||||| ||| Sbjct 1090754 CATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCT 1090695 Query 20266 GAATATG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321 |||||| ||| ||| | ||||| ||||||||| ||||| || ||| | Sbjct 1090694 GAATATAAAGATTGTGATG----CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGA 1090639 Query 20322 TGTTATTAATTTAATTAAAA-CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGA 20380 | | ||||| ||||||| | |||||| | || |||||||| || | | ||||||| Sbjct 1090638 TATCATTAAGA-AATTAAAGTCCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGA 1090580 Query 20381 ACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG 20440 | | |||| | | ||||||||| |||||||||||| | | || ||||| || | Sbjct 1090579 ATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATG 1090520 Query 20441 TT---------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||||| | |||| || ||| | ||||||| |||| || Sbjct 1090519 TTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTG 1090460 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||| |||| ||||||||||| ||||| ||||| || | || | ||||||| Sbjct 1090459 ATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTG 1090400 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| ||| | | ||||| || | || || || || || || || | | Sbjct 1090399 CTCATGTGGTTGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGT 1090340 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCC 20663 | | ||||| | || |||| ||| ||| | |||| ||||||||||| || Sbjct 1090339 ATTTGGATCATGTGGATGCTTTGAAAGAACAACTTGAACGAATTCCAAAACAATTTCC 1090282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183270241750