Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=2377843 Score = 118 bits (130), Expect = 1e-21 Identities = 409/620 (66%), Gaps = 35/620 (6%) Strand=Plus/Minus Query 104153 AAGGCGAAGATCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAAC 104209 |||| ||| | ||| || ||||||||| ||||||||| | |||| | || Sbjct 1091005 AAGGTGAACACCGTCCAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCAC 1090946 Query 104210 AATTAAAATTTAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTT 104266 |||||| |||| ||||| || || | ||||| || ||||||| || ||||| |||| Sbjct 1090945 AATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTT 1090886 Query 104267 GGAAAGGAGTTGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTA-CAGATGTTTCTGTA 104325 ||||| | | | ||| | |||||||||||| || ||| | | |||| | | Sbjct 1090885 CTAAAGGTATCATTCATGAATTATTATGGTTTATT-GCTGGATCAACCGATGCTAAAATT 1090827 Query 104326 TTAAATCAAAAAGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT---TTTATACACAA 104382 |||| | ||||| |||||||||||| | |||| | |||| ||| || | || Sbjct 1090826 TTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATC-TCGTGAGTTTTTAGATAA 1090768 Query 104383 CAAAA-------TCTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAG 104435 | || | | || |||||| ||||| |||||||||| || ||||| Sbjct 1090767 GTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAG 1090708 Query 104436 ACATTATGGTGAAAATTATATTGGGTGCGATAATAAATATGGTGG-------TATAGATC 104488 ||| | ||||| | |||| | || ||| | | ||| ||| ||| |||| Sbjct 1090707 ACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTAT-GATC 1090649 Query 104489 AACTCAAAAATATTATTACAACAATTCAAAATGAACCT-TGGGATAGAAGAATGAT-ATT 104546 | | || |||| |||| | |||| || |||| | ||||||||||| || || Sbjct 1090648 AGTTGCAAGATATCATTAAGA-AATTAAAGTCCAACCCATATGATAGAAGAATAATCATG 1090590 Query 104547 ATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCAT-TGTATAG 104605 | | || ||||| ||| ||| | ||||||||| | ||||| |||||| | | | | Sbjct 1090589 AGT-GCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTG 1090531 Query 104606 CACATTTTGATGT-AAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTT 104664 ||| | |||| || ||| | | ||| | |||| |||| || ||| || | | Sbjct 1090530 TCAATTCT-ATGTTAATTTCCCAGA-AAACGCTAAACCTAAATTATCATGTTTATTGTAT 1090473 Query 104665 CAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTA 104724 || |||||| |||||||| |||||||||||||| ||||| || ||||| || ||| Sbjct 1090472 CAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTA 1090413 Query 104725 ACACATATAATAGCTCATGT 104744 || | || || |||||||| Sbjct 1090412 ACTAAGATGATTGCTCATGT 1090393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679813125348000