Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 1e-21
>seq1
Length=2377843
Score = 118 bits (130), Expect = 1e-21
Identities = 409/620 (66%), Gaps = 35/620 (6%)
Strand=Plus/Minus
Query 104153 AAGGCGAAGATCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAAC 104209
|||| ||| | ||| || ||||||||| ||||||||| | |||| | ||
Sbjct 1091005 AAGGTGAACACCGTCCAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCAC 1090946
Query 104210 AATTAAAATTTAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTT 104266
|||||| |||| ||||| || || | ||||| || ||||||| || ||||| ||||
Sbjct 1090945 AATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTT 1090886
Query 104267 GGAAAGGAGTTGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTA-CAGATGTTTCTGTA 104325
||||| | | | ||| | |||||||||||| || ||| | | |||| | |
Sbjct 1090885 CTAAAGGTATCATTCATGAATTATTATGGTTTATT-GCTGGATCAACCGATGCTAAAATT 1090827
Query 104326 TTAAATCAAAAAGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT---TTTATACACAA 104382
|||| | ||||| |||||||||||| | |||| | |||| ||| || | ||
Sbjct 1090826 TTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATC-TCGTGAGTTTTTAGATAA 1090768
Query 104383 CAAAA-------TCTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAG 104435
| || | | || |||||| ||||| |||||||||| || |||||
Sbjct 1090767 GTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAG 1090708
Query 104436 ACATTATGGTGAAAATTATATTGGGTGCGATAATAAATATGGTGG-------TATAGATC 104488
||| | ||||| | |||| | || ||| | | ||| ||| ||| ||||
Sbjct 1090707 ACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTAT-GATC 1090649
Query 104489 AACTCAAAAATATTATTACAACAATTCAAAATGAACCT-TGGGATAGAAGAATGAT-ATT 104546
| | || |||| |||| | |||| || |||| | ||||||||||| || ||
Sbjct 1090648 AGTTGCAAGATATCATTAAGA-AATTAAAGTCCAACCCATATGATAGAAGAATAATCATG 1090590
Query 104547 ATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCAT-TGTATAG 104605
| | || ||||| ||| ||| | ||||||||| | ||||| |||||| | | | |
Sbjct 1090589 AGT-GCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTG 1090531
Query 104606 CACATTTTGATGT-AAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTT 104664
||| | |||| || ||| | | ||| | |||| |||| || ||| || | |
Sbjct 1090530 TCAATTCT-ATGTTAATTTCCCAGA-AAACGCTAAACCTAAATTATCATGTTTATTGTAT 1090473
Query 104665 CAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTA 104724
|| |||||| |||||||| |||||||||||||| ||||| || ||||| || |||
Sbjct 1090472 CAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTA 1090413
Query 104725 ACACATATAATAGCTCATGT 104744
|| | || || ||||||||
Sbjct 1090412 ACTAAGATGATTGCTCATGT 1090393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679813125348000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |