Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq5 154 1e-32 seq16 138 8e-28 >seq5 Length=745199 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | || || |||||||| |||||||| || Sbjct 622550 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 622609 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| |||||||||||||||| |||||| | ||||| | |||||| || |||| Sbjct 622610 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 622669 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || |||||| || || | || ||||| || | ||| || Sbjct 622670 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCGACT 622729 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||||||||| |||||||| || | |||||| || |||||||||||| Sbjct 622730 TCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACGAAAATTTGCATA 622777 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | || || || ||||| |||||||| || Sbjct 622778 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 622837 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTC 15249 | | |||| |||||||||||||||| ||||| | ||||| | |||||| || Sbjct 622838 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATC 622890 >seq16 Length=329187 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | ||| || || ||||| |||||||| || Sbjct 297499 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 297440 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||| |||||||| ||||| | ||||| | |||||| || |||| Sbjct 297439 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 297380 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||| || ||| | || ||||| ||| ||| || Sbjct 297379 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACT 297320 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || |||||||| |||||||| || | || || || ||||||||||| ||| Sbjct 297319 TCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTTT 297269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178537891150