Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 3e-21
seq21 100 7e-16
>seq1
Length=2377843
Score = 118 bits (130), Expect = 3e-21
Identities = 241/347 (69%), Gaps = 12/347 (3%)
Strand=Plus/Minus
Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAA--TGTAAAAATTT 111429
||||||||| ||| || |||| || || || | ||| ||| ||| |||||||
Sbjct 1090859 TGGTTTATTGCTGGATCAACCGATGCTAA--AATTTTAACCAACAAAGGTGTTAAAATTT 1090802
Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAG--A 111487
|||| || |||||||| ||||| ||| ||||| |||| | ||| | || || | |
Sbjct 1090801 GGGAAGGTAATGGATCTCGTGAGTTTTTAGATA-AGTTAGGATTGACT-CATCGTCGTGA 1090744
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA-A 111546
||||||| | ||||||||||| || || |||||| | ||||||||||| || || ||| |
Sbjct 1090743 AGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGA 1090684
Query 111547 CCATGCACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAA 111605
|| | | || | ||| | ||| || |||||| || || || ||||| | ||
Sbjct 1090683 TTGTG-ATG-CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAA 1090626
Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665
| ||| ||||||| | | | | || || |||||||| ||||| ||| | ||
Sbjct 1090625 TTAAAGTCCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTT 1090566
Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
|| |||||||| | || ||||||||| | | || || || |||||
Sbjct 1090565 GATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 1090519
Score = 104 bits (114), Expect = 6e-17
Identities = 303/465 (65%), Gaps = 29/465 (6%)
Strand=Plus/Plus
Query 22501 GCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTa 22560
|||||||||| |||||||||||||||| ||| |||| | | || || ||| |
Sbjct 1025293 GCATTTGCTGCTATTGAAGGCATTTTCTTCAGTGGGTCATTCGCTTCCATTTTCTGGTTG 1025352
Query 22561 aaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAG 22620
|||||| | | | ||||| ||| |||| || |||||||| || || | | || ||
Sbjct 1025353 AAAAAAAGAGGGTTGATGCCAGGTTTAACTTTCTCAAATGAATTGATCTGTAGGGACGAA 1025412
Query 22621 GGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA---------TCATTCAT 22671
||| |||| ||||||| ||| ||| | |||| | ||||| | | |
Sbjct 1025413 GGTATTCACACCGATTATGCTTGTTTACTATTT-----TCATACTTGGAGAATAAGCCGG 1025467
Query 22672 AAACTTCCAT-AT-GAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTC 22729
| ||||||| || |||| | ||||| || | || ||| |||||
Sbjct 1025468 ATCCTTCCATTATAGAAA---------AGATTATCACTGAAGCTGTTAGTATTGAAAAG- 1025517
Query 22730 TATTTATTT--GCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAG 22787
| || || | || ||| | ||||| | | | ||||| ||| || | ||| |
Sbjct 1025518 -AAGTACTTCAGTGATGCGCTTCCAGTTTCTTTGTTGGGTATGAATTGTGATTTGATGTG 1025576
Query 22788 TACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTA 22847
| |||| | ||| | ||| ||| | | || || | | ||| ||| ||| ||||
Sbjct 1025577 TCAATATGTGGAATATTGTGCCGATAGATTGTTGGTTGCTTTTGGTAATGATAAGTATTA 1025636
Query 22848 TAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTT 22907
|||||| |||||||||||| | |||||| ||| || | | || || ||||||||
Sbjct 1025637 TAACGTGACTAATCCATTTGATTTCATGGAAAATATATCCTTGGCCGGTAAAACCAATTT 1025696
Query 22908 CTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952
||| ||||| ||||| ||| ||||||| ||| ||||| |||||
Sbjct 1025697 CTTTGAAAAGAGAGTGTCTGATTACCAAAGAGCTGGTGTCATGGA 1025741
>seq21
Length=244291
Score = 100 bits (110), Expect = 7e-16
Identities = 252/371 (68%), Gaps = 14/371 (4%)
Strand=Plus/Minus
Query 363599 TGTCTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACA 363657
||||||| || |||||| || ||||| || ||||| || || || |||| | | ||
Sbjct 8689 TGTCTTCCTG-TTTCTTGATAGCTATGAAAGATGATTCAATAGATGGAATCTATAAAACC 8631
Query 363658 CTTAAGAATTGTGCTCTTATTTCCAA-GAATGCAGGCGGAATTGGTGTATCGATCCACA- 363715
||| | | | || | |||||||| | || |||| ||||||||| ||| || |||
Sbjct 8630 CTTCACGAATCAGCATTAATTTCCAAAGCAT-CAGGGGGAATTGGT--ATCCATGTACAT 8574
Query 363716 -ATGTTCGTGCACA--GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTG 363771
| |||||| | | | || || ||| || || | ||||| | ||||| |
Sbjct 8573 GAAGTTCGTTCCAATGGTTCA--TATATTGCTGGTACCAATGGGATTG-CAAATGGATTA 8517
Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831
||||| ||| | ||||| ||| |||| ||||| | || |||||||||||||| || ||
Sbjct 8516 GTTCCAATGTTACGTGTTTTTAACAACACTGCACGATATGTCGACCAGGGTGGTGGTAAA 8457
Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891
|| || || ||||| || ||| | || ||| |||| |||||||||||| || |
Sbjct 8456 CGTCCTGGTGCTTTTGCGATTTATATTGAACCTTGGCATGGCGATATTTTTGACATTTTA 8397
Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951
||| | | ||||| |||| || ||||| | | | ||| | ||||||| | |
Sbjct 8396 GAGATGAGAAAAAATCATGGAAGTGAAGAATTAAGAACTAGAGATTTATTCTATGGATTA 8337
Query 363952 TGGGTTTCTGA 363962
||| || ||||
Sbjct 8336 TGGATTCCTGA 8326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351095117300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |