Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 7e-22
seq16 116 2e-21
>seq5
Length=745199
Score = 118 bits (130), Expect = 7e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | ||| ||||| || | ||| || |||||||| ||||| |||||
Sbjct 622549 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGA 622608
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
||| | |||| ||||||||||| || || || || | | ||||||||| | ||
Sbjct 622609 CAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGG 622668
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| |||||||| || ||||| || || || | | || || | ||| ||
Sbjct 622669 AATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCGAC 622728
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct 622729 TTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACGAAAATTTGCAT 622776
Score = 91.5 bits (100), Expect = 1e-13
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | ||| ||||| || | ||| ||||||||||| ||||| ||||
Sbjct 622776 TACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGAATGTTGTAGTCAG 622835
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATC 38203
||||| | |||| ||||||||||| || ||||| || | | |||||||||
Sbjct 622836 ACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATC 622890
>seq16
Length=329187
Score = 116 bits (128), Expect = 2e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | ||| ||||| || | || |||||||| || ||||| |||||
Sbjct 297500 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 297441
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|||| | | || || |||||||| || ||||| || | | ||||||||| | ||
Sbjct 297440 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 297381
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||||||||| ||||| || ||||| | | || || ||| ||
Sbjct 297380 AATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGAC 297321
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
||| || |||||||||||||| || ||||| || ||||| || ||||| |||
Sbjct 297320 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTTT 297269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946587674650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |