Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 3e-21
seq16 111 1e-19
>seq5
Length=745199
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || ||||| || |||||| | || || | ||||| || || |||
Sbjct 622776 ATGCAAATTTTCGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAATCTTCT 622717
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | || | || |||||| || |||||||| |||||||| || ||
Sbjct 622716 GACACCATTGA-TAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATCA 622658
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||| || || |||||||||||||| | | | || || || |||||
Sbjct 622657 ACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACAA 622598
Query 25178 TATTCAAAAAGAATCCAC 25195
|||||||||||||| ||
Sbjct 622597 CATTCAAAAAGAATCTAC 622580
>seq16
Length=329187
Score = 111 bits (122), Expect = 1e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || || |||||| | || || | ||||| || || ||
Sbjct 297273 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 297332
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || || |||||| ||||||||||| |||||||| || |
Sbjct 297333 GACACCATTGA--CAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATC 297390
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || |||||||| ||||||| | | ||| || || ||||
Sbjct 297391 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 297450
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || ||||| ||||| ||
Sbjct 297451 ACATCCAAAAGGAATCTAC 297469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327207822250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |