Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq16 159 3e-34
seq5 150 2e-31
>seq16
Length=329187
Score = 159 bits (176), Expect = 3e-34
Identities = 175/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273
|||||||||||||||| || || || ||||| |||||||| | || | ||||| |||
Sbjct 297268 TAAAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAAT 297327
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
|| |||| ||| | ||| || ||||| ||||| |||||||| || ||||||||||| |
Sbjct 297328 CCTCCGACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAG 297387
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
|||||||| | | || ||||| || ||||| || || ||| | || | || || |
Sbjct 297388 ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 297447
Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||| ||||| ||||| ||| | || || || ||| ||||| | || |||
Sbjct 297448 ACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 297500
>seq5
Length=745199
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| |||||||||||||| |||||||| | || | ||||| ||| | |
Sbjct 622776 ATGCAAATTTTCGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAATCTTCT 622717
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | ||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct 622716 GACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 622657
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || ||||| ||||| || | ||| | || || ||||||
Sbjct 622656 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACAAC 622597
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||||||||||| || | || || || ||| ||||| | || ||||||
Sbjct 622596 ATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTTTT 622546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727232684750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |