Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 >seq1 Length=2377843 Score = 122 bits (134), Expect = 8e-23 Identities = 267/402 (66%), Gaps = 15/402 (4%) Strand=Plus/Plus Query 20197 GTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAG 20256 ||| ||||| |||| || |||||||| || || | | || |||||||||| Sbjct 1090344 GTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAAT 1090403 Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316 ||| | |||||| | | |||| |||||||| |||||||||||||||||||| || | Sbjct 1090404 CATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACA 1090463 Query 20317 CGACCTCTGATACAGCTGACAGGA------AAGCTCACCGTCAGCT---------ACATA 20361 || |||||||||| ||| || | | | | ||| || ||||| Sbjct 1090464 AGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATA 1090523 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 |||||||| || | ||||| || || | ||||| || || | || ||||| Sbjct 1090524 GAATTGACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCA 1090583 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 |||| ||| || ||||||||||| | || || |||| | | | || | Sbjct 1090584 GGCACTCATGATTATTCTTCTATCATATGGGTTGGACTTTAATTTCTTAATGATATCTTG 1090643 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 ||| || ||| | || || || ||||| |||||||| || || | || ||||| Sbjct 1090644 CAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAA 1090703 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 ||| ||||| |||||||| ||||| ||||||||||| || || Sbjct 1090704 GTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTC 1090745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371972426000