Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 5e-18
seq16 98.7 2e-15
>seq5
Length=745199
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || || ||||| | | || | ||||||||||||||||| || |||||
Sbjct 622585 TTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAA 622644
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | |||||| ||| || ||||||||||| |||||||| | ||| |||||
Sbjct 622645 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTT 622704
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || ||||| ||||| | || || || || || || | ||| || ||
Sbjct 622705 ATCAATGGTGTCAGAAGATTCGACTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAAC 622764
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 622765 GAAAATTTGCAT 622776
>seq16
Length=329187
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||| | | || | || ||||| |||||||| || || ||
Sbjct 297464 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 297405
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | |||||| ||| || |||||||| || |||||||| | ||| || ||
Sbjct 297404 GATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTAGATTTGACATT 297345
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||||| ||||| | || || || || || || | ||||||||
Sbjct 297344 GTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGAC 297285
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 297284 GAAAATTTGCAT 297273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652132851700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |