Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 107 5e-18 seq16 98.7 2e-15 >seq5 Length=745199 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || | ||||||||||||||||| || ||||| Sbjct 622585 TTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAA 622644 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | |||||| ||| || ||||||||||| |||||||| | ||| ||||| Sbjct 622645 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTT 622704 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| ||||| | || || || || || || | ||| || || Sbjct 622705 ATCAATGGTGTCAGAAGATTCGACTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAAC 622764 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 622765 GAAAATTTGCAT 622776 >seq16 Length=329187 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | || ||||| |||||||| || || || Sbjct 297464 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 297405 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | |||||| ||| || |||||||| || |||||||| | ||| || || Sbjct 297404 GATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTAGATTTGACATT 297345 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || || || || || | |||||||| Sbjct 297344 GTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGAC 297285 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 297284 GAAAATTTGCAT 297273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652132851700