Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=2377843 Score = 98.7 bits (108), Expect = 1e-15 Identities = 305/472 (65%), Gaps = 0/472 (0%) Strand=Plus/Minus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 ||||||| || || ||||| ||||| |||||||| |||||| || | | | |||| Sbjct 1848993 TGTTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTTGCTATGAAGG 1848934 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 || ||||| || |||| ||| | | || ||||| || || || | Sbjct 1848933 ATGATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTG 1848874 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | ||||| || | ||| ||| ||| | ||||| |||| Sbjct 1848873 CTGGTGGTATTGGTTTGCACATCCACAACATTCGTTCCACTGGTGCTTACATTGCTGGTA 1848814 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | ||||| || |||||||| | | |||||| || | || ||||||||| | || || | Sbjct 1848813 CTAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACACTGCTCGTT 1848754 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 | || || || |||||| | ||| ||| |||| || | || | || || |||| Sbjct 1848753 ATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATACTTGGAACCATGGC 1848694 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 || || | | || ||||| | ||||||||||||| || || || | Sbjct 1848693 ACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAAGAAATCAGAG 1848634 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 |||||||| | ||| ||| | ||| | ||||| | || ||||| | || || ||| Sbjct 1848633 CCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAGAGTTGAACAAA 1848574 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 || | ||||| | | || | ||| |||||| ||| || |||| || || Sbjct 1848573 ACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGATGT 1848522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722272394000