Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq16 102 8e-17
seq5 87.8 2e-12
>seq16
Length=329187
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | | || |||||||| ||||||||||| |
Sbjct 297499 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 297440
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || | ||||||||| | | |||| | | ||||| || || ||
Sbjct 297439 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 297380
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||||||||| |||||| ||| | ||||| | | |||||||| || || ||
Sbjct 297379 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGT-CAATGGTGTCGGAGGATTCGAC 297321
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||||||||| | || || || ||||| |||||
Sbjct 297320 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 297273
>seq5
Length=745199
Score = 87.8 bits (96), Expect = 2e-12
Identities = 168/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 138370 CATAAACTGTAGCCGCAG--CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCT 138427
|||| |||||||| | || |||| ||| | ||| || || || | | || || |
Sbjct 622530 CATATACTGTAGCTTAAAAACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTT 622589
Query 138428 TTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTA 138487
|||||||||||||||| || || | ||| || | ||||||||| | | || |
Sbjct 622590 TTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCA 622649
Query 138488 GACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCA 138547
| ||||| || || || ||||||||||| || |||||| ||| | | || |
Sbjct 622650 ATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAA 622709
Query 138548 CGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAA 138607
|||||| | || || || || | || | ||||||||||| | |||||| || ||||
Sbjct 622710 TGGTGTCAGAAGATTCGACTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACGAAAA 622769
Query 138608 TCTGCAT 138614
| |||||
Sbjct 622770 TTTGCAT 622776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261469508000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |