Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq16 102 8e-17 seq5 87.8 2e-12 >seq16 Length=329187 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | | || |||||||| ||||||||||| | Sbjct 297499 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 297440 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||||||||| | | |||| | | ||||| || || || Sbjct 297439 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 297380 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| |||||| ||| | ||||| | | |||||||| || || || Sbjct 297379 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGT-CAATGGTGTCGGAGGATTCGAC 297321 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | || || || ||||| ||||| Sbjct 297320 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 297273 >seq5 Length=745199 Score = 87.8 bits (96), Expect = 2e-12 Identities = 168/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 138370 CATAAACTGTAGCCGCAG--CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCT 138427 |||| |||||||| | || |||| ||| | ||| || || || | | || || | Sbjct 622530 CATATACTGTAGCTTAAAAACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTT 622589 Query 138428 TTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTA 138487 |||||||||||||||| || || | ||| || | ||||||||| | | || | Sbjct 622590 TTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCA 622649 Query 138488 GACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCA 138547 | ||||| || || || ||||||||||| || |||||| ||| | | || | Sbjct 622650 ATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAA 622709 Query 138548 CGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAA 138607 |||||| | || || || || | || | ||||||||||| | |||||| || |||| Sbjct 622710 TGGTGTCAGAAGATTCGACTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACGAAAA 622769 Query 138608 TCTGCAT 138614 | ||||| Sbjct 622770 TTTGCAT 622776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261469508000