Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 8e-15 seq5 87.8 4e-12 >seq16 Length=329187 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | || || |||||||||| ||||||||||| |||||| || || Sbjct 297488 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 297429 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || || ||||| | | || || || || ||| |||||| Sbjct 297428 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 297369 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || || || | |||||| | | ||| || ||||| || || Sbjct 297368 GTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 297309 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | || || || |||||||| Sbjct 297308 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTG 297276 >seq5 Length=745199 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 622561 TCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 622620 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| | || || || ||||| || | | || || || || ||| |||||| Sbjct 622621 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 622680 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || ||| || | |||||| | | ||| || || || || || Sbjct 622681 ATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCGACTTCTAAGGTAAT 622740 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | |||||| || |||||||| Sbjct 622741 AGTTTTACCAGTTAAAGTTTTAACGAAAATTTG 622773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919334260050