Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 309 4e-79
seq21 156 5e-33
seq3 87.8 2e-12
>seq1
Length=2377843
Score = 309 bits (342), Expect = 4e-79
Identities = 1059/1626 (65%), Gaps = 45/1626 (3%)
Strand=Plus/Minus
Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788
||||| || ||||| |||||||| |||||||| |||||| | |||| | |||||
Sbjct 1848991 TTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTTGCTATGAAGGAT 1848932
Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848
||||| || | || ||||||| ||| | | |||||| ||| || ||| | |||
Sbjct 1848931 GATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTGCT 1848872
Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTAC 111907
|||||||| || |||||||||| | | | ||| | || || ||| |||||
Sbjct 1848871 GGTGGTATTGGTTTGCACATCCACAACATTCGTTCCA-CTGGTGCTTACATTGCTGGTAC 1848813
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|||||| || | ||||||||||| ||| | | || || ||| ||| || || ||
Sbjct 1848812 TAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACACTGCTCGTTA 1848753
Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATC------TATCGCAGTCTATCTTGAGCCATG 112021
||| | |||| ||| | |||| || | | | || | || | || |||||
Sbjct 1848752 TGTTGATCAAGGTGG---TAACAAGAGACCAGGTGCTTTTGCTTTATACTTGGAACCATG 1848696
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081
|||| |||||| | || || | || | | ||||| ||| | || || |
Sbjct 1848695 GCACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAAGAAAT-CA 1848637
Query 112082 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| ||| | || | ||| | ||| | ||||| |||||| | |||||||||||||||||
Sbjct 1848636 GAGCCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAGAGTTGAAC 1848577
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
| | || | ||| || | || | |||| | | || || ||| | || |||| | |
Sbjct 1848576 AAAACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGATGTCTACG 1848517
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260
|||| || ||||||| | || || | ||||| | || | || | | ||
Sbjct 1848516 GTGATGAATTTGAAGAATTATATACCAGATACGAAAAGGAGAACCGTGGTAGACAAACCA 1848457
Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGT-CTCAAACCGAGACTGGTACACCA 112319
| ||| | | ||| | ||||| || ||| | |||||||| |||||||| |||
Sbjct 1848456 TCAAAGCCCAAAAATTATGGTACGCTAT-CTTGAGTGCCCAAACCGAAACTGGTACTCCA 1848398
Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379
| |||| | || ||||| || |||||| |||| ||| ||||||||||||||||| |||
Sbjct 1848397 TTTATGTTGTATAAAGATGCTTGTAACACCAAGACTAACCAAAAGAATTTGGGTGTCATC 1848338
Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439
|| ||||||| | ||| ||||| | |||| | | | |||||| |||||
Sbjct 1848337 AAATCTTCCAACTTGTGTTGTGAAATTGTTGAATATTCTGCTCCAGATGAAGTTGCTGTT 1848278
Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGA 112498
|||||| | || || || || | || | ||| || | || || | | | |||
Sbjct 1848277 TGTAACTTGGCTTCCATTGCATTGCCATCTTTTGTTGAACACGATGAAAGCAATACTTGG 1848218
Query 112499 T-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553
| | ||||||| | || |||||||| ||| |||||| ||| | |||||||||
Sbjct 1848217 TATAACTTTGAAAAATTGCATGAAGTTACTAAAGTTGTCACTCGTAACTTGAACAGAGTT 1848158
Query 112554 ATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612
|| ||| | || | ||||| ||| ||| ||| | |||||||||||||||| | ||
Sbjct 1848157 ATCGATCGTAACTACTACCCAGTTCCAGAA-GCTGAAAGATCTAATATGAGACACAGACC 1848099
Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTG---TCGCCACGCAT 112668
||||| | | ||||| |||||| | || |||| || || |||||| | || |||
Sbjct 1848098 AATTGCTTTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGTCTTTGAGATTGC----CAT 1848043
Query 112669 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCG 112728
||||||| | ||||| | ||| | || | || ||||| || || || || || |
Sbjct 1848042 TTGATTCTCAAGAAGCTAGAGAATTAAACATTCAAATCTTTGAAACCATTTACCATGCTG 1847983
Query 112729 CTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788
|| |||| | | || || || | | || ||| ||||||| | ||||
Sbjct 1847982 CTGTTGAATCTTCTATTGAATTAGCTGCTGAAGAAGGTGTCTATGAAAGTTACCCAGGTT 1847923
Query 112789 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACT 112848
|||||||||| ||||| | | |||||||| ||| |||| | ||||| || | |
Sbjct 1847922 CTCCAGCTTCTCAAGGTTTATTACAATTTGACTTGT-GGAACAGAAAACCAA-CTGAATT 1847865
Query 112849 A--CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906
| || ||||| || | || || || | | ||| | | ||| | ||
Sbjct 1847864 ATGGGATTGGGATACTTTGAAACAAAAGATGGCCAAACATGGTTTGAGAAACTCCTTGTT 1847805
Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966
| | || ||||||||||| || || || |||||||||||||||| |||||||| || ||
Sbjct 1847804 GGTTGCTCCAATGCCAACTGCTTCTACTTCACAAATCTTGGGTAACAATGAATGTTTCGA 1847745
Query 112967 ACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 113025
||| ||||| | ||||| || ||| |||||| | || || || || |||||||
Sbjct 1847744 ACCTTACACTTCCAACATTTACTCT-AGAAGAGTTTTGGCTGGTGAATTCCAAATTGTCA 1847686
Query 113026 A--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083
| || | | | || | || | || | ||| | ||| | | |||||||
Sbjct 1847685 ATCCATACTTGT--TGAAGGATTTGGTTGATTTGGGTATTTGGAATGATGCTATGAAGAG 1847628
Query 113084 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAA 113143
| ||| | |||||| || ||| | | | || ||||||||||| ||
Sbjct 1847627 TAACATTATTTCCAACAATGGTTCGATCCAAGGTTTGCCAAACATCCCAGATGAAATCAA 1847568
Query 113144 GAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCA 113201
| |||||| || |||||||||| ||| | || || ||||||| ||||| ||
Sbjct 1847567 GGCTTTGTACAAGACTGTTTGGGAAATTTCACAA--AAACATATCATTGATATGGCTGCT 1847510
Query 113202 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACG 113261
||| | | | |||||||||||| |||| | ||||| | ||| || ||||||
Sbjct 1847509 GATAGAGCTGCTTTCATTGATCAATCTCAATCTTTGAATATTCACATTAAAGATCCAACT 1847450
Query 113262 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 113321
||| || | | |||||| | || |||||||||||||| | || || || |||
Sbjct 1847449 ATGGGTAAATTGACAAGTATGCATTTCTATGGTTGGAAGAAGGGTTTGAAGACTGGTATG 1847390
Query 113322 TATTAC 113327
|| |||
Sbjct 1847389 TACTAC 1847384
Score = 96.9 bits (106), Expect = 4e-15
Identities = 517/811 (64%), Gaps = 29/811 (4%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
|||||| |||||| || ||| | || |||||||| |||||||| | |||||
Sbjct 1804736 TGGACTTGTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAACAACAAATTAAAT 1804677
Query 101874 GAAAATGAAAAGAAATTCATAAAATACA-TCCTGGCATTCTTTGCTGGGTCCGATGGAAT 101932
|| ||||||| || ||| || | | | || || || |||| || ||||| ||
Sbjct 1804676 GACAATGAAA-GATATTTTGTTTCTAGAGTTTTAGCCTTTTTCGCTGCTTCTGATGGTAT 1804618
Query 101933 TGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATC 101992
|||| ||| || | | | | |||||| ||| || || ||| | ||||| | |||
Sbjct 1804617 TGTTGGTGAAAACTTGATTGAAAACTTTTCTGCCGAAGTCCAACTGCCAGAAGCTAAATC 1804558
Query 101993 TTTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||||| || || | |||| ||| ||| | ||| || | || | | | |
Sbjct 1804557 ATTCTATG-GTTTCCAAATCATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTAA 1804499
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-----TTGAAGCCATCCA 102106
| || | ||| |||| || | | ||||||| | | | || | ||||| |
Sbjct 1804498 TTGAAACTTATGTTAAAGA-----CCCACAAGAAGCTGATTTCTTGTTTAATGCCATTGA 1804444
Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGT 102165
|| ||||||||||| |||||||| || ||||| || || ||| || | | ||||
Sbjct 1804443 AAACATTCCATGTATTACCAAGAAAGCTGAATGGGCCATCAAATGGATTCAAGATAAAGA 1804384
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
|| || | |||||| || | | || ||||| | |||| ||||| |||||| ||
Sbjct 1804383 TGC-TTTATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTG 1804325
Query 102226 GTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284
|||| || ||| |||| | ||| | || ||| ||||| | ||||||||| | |||
Sbjct 1804324 GTTCATT-TGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTC 1804266
Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTT 102342
||||| || | |||| | | || || || | || || ||||| | | | ||
Sbjct 1804265 TCCAATGAATTGATCTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTC 1804206
Query 102343 TCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCG 102402
|| | |||| | |||| | | || | | || | ||| || ||||| |
Sbjct 1804205 TCCCA--CTTGCAACACAGACCATCTCCAGAAATTGTTGAAAAGATTATTGTTGAAGCTG 1804148
Query 102403 TTGAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATT 102462
|||| |||| || | || | ||||| |||||| || | | |||||||| |
Sbjct 1804147 TTGATGTTGAAAAAGAATATTTCACTGATGCTCTTCCAGTTTCTTTATTGGGTATGAACT 1804088
Query 102463 CTGAAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGG 102522
||| ||||| ||||| |||| ||||| |||||||||| || | | |||
Sbjct 1804087 GTGACTTGATGTGTCAATATGTTGAATATGTTGCTGATAGATTATT--ATTTGCCTTGGG 1804030
Query 102523 TGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGA 102580
| | || ||| || | || ||||| || |||||||| || ||| | | |
Sbjct 1804029 TAACAAGAAAGTTTACAATGTTACTAACCCATTCGATTTCATGGAAAATATTTCCTTGGC 1803970
Query 102581 CGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611
|| || || ||||| ||||||||||| |||
Sbjct 1803969 TGGTAAAACCAACTTTTTCGAAAAGAGAGTT 1803939
>seq21
Length=244291
Score = 156 bits (172), Expect = 5e-33
Identities = 643/993 (65%), Gaps = 47/993 (5%)
Strand=Plus/Minus
Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342
||| ||| | | || ||||| || || ||| |||||||||||||| ||||| |||||
Sbjct 8163 AGCAATTTTAGAATCACAAACTGAAACCGGTGGCCCATATATGCTTTATAAAGATGCCTG 8104
Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402
||| |||| ||||| || || | ||| |||||| || || | || ||
Sbjct 8103 TAATGAAAAATCAAATCAGAAAAACCTTGGTACAATCAAGTCGTCAAATTTGTGCTGTGA 8044
Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462
||| | |||| | || ||| || || ||||||||||| |||| || | || |
Sbjct 8043 AATTGTTGAATATTCATCACCAGAAGAAACAGCTGTGTGTAATCTCGGGTCCCTTGCATT 7984
Query 112463 CCCCAAGTATGTGGATCCA---GA-GACAAAGACAT-----TTGATTATGAAAAACTCCA 112513
|| | |||| || | || || || ||| || |||||| || ||||| ||
Sbjct 7983 ACCGACGTATTTGAAAACATCCGATGATGAAGTAATAGAGTTTGATTTCGAGAAACTACA 7924
Query 112514 CGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 112573
|| || || | | |||||| | |||| ||| || ||| || || || ||
Sbjct 7923 TTCTGTCACCAAGGTGTTGGCTAAAAACTTGAACAAAGTGATCGATGTAACATTATATCC 7864
Query 112574 CGTTGAGACTGCTCGTAAA-TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632
|||||||| || || | | || |||| | |||||||||||| | ||||| ||||
Sbjct 7863 TGTTGAGACAGC-CGAATACTCAAATAAACGTAACCGTCCAATTGCCTTGGGTGTTCAAG 7805
Query 112633 GTCTCGCGGATGTATT---CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 112689
| | || ||| |||| | ||| | || || ||||||| || || | || | |
Sbjct 7804 GGTTAGCAGATTTATTTGCCGAACTTAG--GCTAC-CATTTGAATCAGAAGCTGCTAGGA 7748
Query 112690 AAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCG--AGTTCGGA 112747
|| | ||| | |||||||| ||||| || || || |||||||| || |||| ||
Sbjct 7747 AATTAAATATTCAGATATTTGAAACAATCTACCATGCGGCTCTTGAAGCTTCAGTT--GA 7690
Query 112748 GTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGT 112807
|| | || || ||||||||||| ||| | || || || || || |||| |
Sbjct 7689 ATTATCTATTCAAGACGGACCATATGAAACTTTTCAAGGATCACCTGCATCTGAAGGTAT 7630
Query 112808 GCTTCAATTTGATATGTGG---GAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCT 112864
|| ||||||||||||||| | | | | ||| | ||||||||| | ||
Sbjct 7629 TCTACAATTTGATATGTGGAATCATACTCCGTCTAAGAT---GTACGACTGGAATAAACT 7573
Query 112865 CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 112923
||| ||| ||| |||| | |||| | | || |||||| | ||||||||||| |
Sbjct 7572 CAAAGAAAGCATTCAAAAATTTGGGT-TAAGAAATTCCCTTTTGGTTGCACCAATGCCTA 7514
Query 112924 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACA 112983
|||| |||||| ||||||| || || ||||||||| |||||||| || || | ||
Sbjct 7513 CAGCTTCCACCTCACAAATTTTAGGATTTAATGAATGTTTTGAACCTTATACATCAAATT 7454
Query 112984 TCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATG 113043
| ||| | || | | |||||||| | | || || ||| || | | | |
Sbjct 7453 TATATAACCGTAGGGTGTTGTCAGGAGAGTTCCAGGTGGTTAATAAGTATTTAATTAAAG 7394
Query 113044 ACCTCAAAGAGATTGGTCTCTGG---TC--CAAGGATATGAAGGATCTCATGGTGAAAGC 113098
|| | | || | ||| | ||| || ||| || | || | ||||| || ||
Sbjct 7393 ACTTGATGGATTTGGGTATTTGGAATTCAGCAATGAGA--AATAAAATCATGATGGAA-- 7338
Query 113099 GGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCAC 113158
||| |||||||||||||| | ||||| | || || || | ||||| ||
Sbjct 7337 -AATGGCTCCATTCAAAATATACAGAGCATTCCCAAAGACATCAAAGAATTGTATAAAAC 7279
Query 113159 AGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 113215
||| |||||||| | | | ||| | | ||||| ||||| || ||| | ||| ||
Sbjct 7278 AGTGTGGGAAATTTCCCAAA--AAGTA-ATAATTGATATGGCAGCTGATAGAGGTAAATT 7222
Query 113216 CATTGATCAAAGTCAAAGTATGAATCTATTCAT 113248
||||||||| ||||||||||| |||||||
Sbjct 7221 TATTGATCAACTGCAAAGTATGAA--TATTCAT 7191
>seq3
Length=1232947
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 163547 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCG 163606
||||| | ||||| ||||| ||||| | ||||| ||||| ||||| ||||||
Sbjct 1215398 TATGGTAGAGTTGCTCCACGTTCTGGATTAGCTGTTAAACATGGTATTTCTACTGGTGCT 1215457
Query 163607 GGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGAC 163666
|||||||||||| | || || |||||||| ||||| ||| | || |||||| | ||
Sbjct 1215458 GGTGTTATTGATGCTGATTATCGTGGTGAAGTTAAAGTTGTTTTATTTAATCATAGTGAA 1215517
Query 163667 AAAGACTTTGA 163677
||||| |||||
Sbjct 1215518 AAAGATTTTGA 1215528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741236108000
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