Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 277 2e-69 >seq1 Length=2377843 Score = 277 bits (306), Expect = 2e-69 Identities = 1082/1671 (65%), Gaps = 59/1671 (4%) Strand=Plus/Plus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 |||| || ||||| ||||| ||||| | | | |||||| ||||| || |||||| Sbjct 1847472 TTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGT 1847531 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 ||||| ||||||||| ||||||||||||||| |||||| ||||| || |||| Sbjct 1847532 TTTTGTGAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGC 1847591 Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTC---ACCATGAGATCCTTCATCTCTTTCGACCAG 109677 | ||| || || |||| || | ||| | |||||| | | ||| Sbjct 1847592 AAACCTTGGATCGA---ACCATTGTTGGAAATAATGTTACTCTTCATAGCATCATTCCAA 1847648 Query 109678 AGACCGACCTTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCAG 109735 | ||| | | | ||| | ||||||| ||| | |||| | |||||||||| Sbjct 1847649 ATACCCAAATCAACCAAATCCTTCAACAAGTATGGAT--TGACAATTTGGAATTCACCAG 1847706 Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795 | | | || ||| ||||| | ||||| ||||||||||| |||||||| || | Sbjct 1847707 CCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCA 1847766 Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT 109855 |||||||| ||| ||||| || ||||| ||||| | | | ||||| | ||| | Sbjct 1847767 AGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCAT 1847826 Query 109856 TCGTCTTTACCCGCTCACG---CATTGCGTCCCAATC--ATAACGACCACTAAATTTAGT 109910 || || || || | || | |||||||| |||| || | ||| | Sbjct 1847827 --GT-TTGGCCATCTTTTGTTTCAAAGTATCCCAATCCCATAATT--CAGTTGGTTT--T 1847879 Query 109911 CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACT 109970 || | ||||| || ||| | || ||| | || ||| |||||||| | |||| Sbjct 1847880 CTG----TTCCACAAGTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGTAACT 1847935 Query 109971 CTCGTACGACCCCT-CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACA 110029 || || ||| ||| | | | || || || |||| || | || ||||| || | Sbjct 1847936 TTCATA-GACACCTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAA 1847994 Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCAC 110089 | || ||||| || ||| || | | || |||| | | || || || | | | | Sbjct 1847995 TGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCA-ATCTC 1848053 Query 110090 AAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATG 110148 ||||| ||||| |||| |||| ||| |||||||| | | |||| || | || |||| Sbjct 1848054 AAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATA 1848113 Query 110149 TTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205 ||||| | | ||| |||| || ||||| |||| || ||||| || | || | Sbjct 1848114 TTAGATCTTTCAGC---TTCTGGAACTGGGTAGTAGTTACGATCGATAACTCTGTTCAAG 1848170 Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTC---GTAATCGAACGTTTTCGTC 110262 || || ||| || || | |||||| | ||| || || || | || || | Sbjct 1848171 TTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTTATACCAAGTATTGCTT 1848230 Query 110263 TCCT--TATTGA-CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCG 110319 || | | || | || | || | ||||| || || | || || |||| | || Sbjct 1848231 TCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGTTACAAACAGCAACTTCA 1848290 Query 110320 TCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAG 110379 ||| | | ||||| | |||||| ||||||||||||| || ||||||||||| Sbjct 1848291 TCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTGATGACACCCAAA 1848350 Query 110380 TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTT 110439 ||||| || || | |||| ||| || ||||| ||||| | ||| |||| ||||||||| Sbjct 1848351 TTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACATAAATGGAGTACCAGTT 1848410 Query 110440 TCCGTCTGTG-ACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGC 110498 || || || | ||| ||| | || | ||||| | ||| || ||| || | Sbjct 1848411 TCGGTTTGGGCACTCAAGA-TAGCGTACCATAATTTTTGGGCTTTGATGGTTTGTCTACC 1848469 Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558 | |||| ||||| |||| || || || |||||||| | ||||| ||||| || Sbjct 1848470 ACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTCATCACCGTAGACATCTGA 1848529 Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618 | ||| || | | ||| |||| | | ||| | || | ||||| ||||| Sbjct 1848530 CAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTT 1848589 Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCAT 110677 |||||||| || || ||||||| || | ||| | ||| | ||| || ||||| | Sbjct 1848590 CATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTGGCTCTGATT-TCTTCTT 1848648 Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737 ||| ||||| | | || | |||||| | |||||| |||||||||||| | | Sbjct 1848649 TACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACTGTGCCATGGTTCCAAGT 1848708 Query 110738 AGACAGCGA-------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTG 110790 | | ||| | ||| || ||| || ||| || | |||||| || || ||| Sbjct 1848709 ATAAAGCAAAAGCACCTGG-TCTCTTGTTACCACCT---TGATCAACATAACGAGCAGTG 1848764 Query 110791 GCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT- 110849 ||||| || |||| |||||||||||| || | ||| |||||| ||||| ||| Sbjct 1848765 TTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACCAGCAATG 1848824 Query 110850 TCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACT 110909 | | || | ||| |||||||| |||||| |||| |||||||||||| || | ||| Sbjct 1848825 TAAGCACC-AGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGA 1848883 Query 110910 AATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGC 110969 |||| ||||| | | | ||| | |||||||| ||||| ||||| |||| | || Sbjct 1848884 AATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTTCATAGC 1848943 Query 110970 AATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGT 111029 || | || || |||||||| || || | || || || |||||||| | || | Sbjct 1848944 AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAACAAACATGGGGA 1849003 Query 111030 CGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATC 111089 | || |||| | ||| |||||| || || || || | | || | ||| Sbjct 1849004 ACCGTGTGTGAAATATCTTTGTGACATCAAATTATAAGTTTCAATAACTCTTGGAATATC 1849063 Query 111090 TTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTC 111140 |||||||||||||||||| ||||||| ||| | | || ||| || |||| Sbjct 1849064 TTTACCGTGAATACCAATAGCAACTCTCATAATTAAATGTTGTGGTCTTTC 1849114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974895670000