Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 277 2e-69
>seq1
Length=2377843
Score = 277 bits (306), Expect = 2e-69
Identities = 1082/1671 (65%), Gaps = 59/1671 (4%)
Strand=Plus/Plus
Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560
|||| || ||||| ||||| ||||| | | | |||||| ||||| || ||||||
Sbjct 1847472 TTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGT 1847531
Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620
||||| ||||||||| ||||||||||||||| |||||| ||||| || ||||
Sbjct 1847532 TTTTGTGAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGC 1847591
Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTC---ACCATGAGATCCTTCATCTCTTTCGACCAG 109677
| ||| || || |||| || | ||| | |||||| | | |||
Sbjct 1847592 AAACCTTGGATCGA---ACCATTGTTGGAAATAATGTTACTCTTCATAGCATCATTCCAA 1847648
Query 109678 AGACCGACCTTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCAG 109735
| ||| | | | ||| | ||||||| ||| | |||| | ||||||||||
Sbjct 1847649 ATACCCAAATCAACCAAATCCTTCAACAAGTATGGAT--TGACAATTTGGAATTCACCAG 1847706
Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795
| | | || ||| ||||| | ||||| ||||||||||| |||||||| || |
Sbjct 1847707 CCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCA 1847766
Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT 109855
|||||||| ||| ||||| || ||||| ||||| | | | ||||| | ||| |
Sbjct 1847767 AGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCAT 1847826
Query 109856 TCGTCTTTACCCGCTCACG---CATTGCGTCCCAATC--ATAACGACCACTAAATTTAGT 109910
|| || || || | || | |||||||| |||| || | ||| |
Sbjct 1847827 --GT-TTGGCCATCTTTTGTTTCAAAGTATCCCAATCCCATAATT--CAGTTGGTTT--T 1847879
Query 109911 CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACT 109970
|| | ||||| || ||| | || ||| | || ||| |||||||| | ||||
Sbjct 1847880 CTG----TTCCACAAGTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGTAACT 1847935
Query 109971 CTCGTACGACCCCT-CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACA 110029
|| || ||| ||| | | | || || || |||| || | || ||||| || |
Sbjct 1847936 TTCATA-GACACCTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAA 1847994
Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCAC 110089
| || ||||| || ||| || | | || |||| | | || || || | | | |
Sbjct 1847995 TGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCA-ATCTC 1848053
Query 110090 AAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATG 110148
||||| ||||| |||| |||| ||| |||||||| | | |||| || | || ||||
Sbjct 1848054 AAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATA 1848113
Query 110149 TTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205
||||| | | ||| |||| || ||||| |||| || ||||| || | || |
Sbjct 1848114 TTAGATCTTTCAGC---TTCTGGAACTGGGTAGTAGTTACGATCGATAACTCTGTTCAAG 1848170
Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTC---GTAATCGAACGTTTTCGTC 110262
|| || ||| || || | |||||| | ||| || || || | || || |
Sbjct 1848171 TTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTTATACCAAGTATTGCTT 1848230
Query 110263 TCCT--TATTGA-CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCG 110319
|| | | || | || | || | ||||| || || | || || |||| | ||
Sbjct 1848231 TCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGTTACAAACAGCAACTTCA 1848290
Query 110320 TCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAG 110379
||| | | ||||| | |||||| ||||||||||||| || |||||||||||
Sbjct 1848291 TCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTGATGACACCCAAA 1848350
Query 110380 TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTT 110439
||||| || || | |||| ||| || ||||| ||||| | ||| |||| |||||||||
Sbjct 1848351 TTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACATAAATGGAGTACCAGTT 1848410
Query 110440 TCCGTCTGTG-ACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGC 110498
|| || || | ||| ||| | || | ||||| | ||| || ||| || |
Sbjct 1848411 TCGGTTTGGGCACTCAAGA-TAGCGTACCATAATTTTTGGGCTTTGATGGTTTGTCTACC 1848469
Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558
| |||| ||||| |||| || || || |||||||| | ||||| ||||| ||
Sbjct 1848470 ACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTCATCACCGTAGACATCTGA 1848529
Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618
| ||| || | | ||| |||| | | ||| | || | ||||| |||||
Sbjct 1848530 CAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTT 1848589
Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCAT 110677
|||||||| || || ||||||| || | ||| | ||| | ||| || ||||| |
Sbjct 1848590 CATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTGGCTCTGATT-TCTTCTT 1848648
Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737
||| ||||| | | || | |||||| | |||||| |||||||||||| | |
Sbjct 1848649 TACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACTGTGCCATGGTTCCAAGT 1848708
Query 110738 AGACAGCGA-------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTG 110790
| | ||| | ||| || ||| || ||| || | |||||| || || |||
Sbjct 1848709 ATAAAGCAAAAGCACCTGG-TCTCTTGTTACCACCT---TGATCAACATAACGAGCAGTG 1848764
Query 110791 GCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT- 110849
||||| || |||| |||||||||||| || | ||| |||||| ||||| |||
Sbjct 1848765 TTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAGTACCAGCAATG 1848824
Query 110850 TCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACT 110909
| | || | ||| |||||||| |||||| |||| |||||||||||| || | |||
Sbjct 1848825 TAAGCACC-AGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGA 1848883
Query 110910 AATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGC 110969
|||| ||||| | | | ||| | |||||||| ||||| ||||| |||| | ||
Sbjct 1848884 AATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCATCCTTCATAGC 1848943
Query 110970 AATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGT 111029
|| | || || |||||||| || || | || || || |||||||| | || |
Sbjct 1848944 AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGAACAAACATGGGGA 1849003
Query 111030 CGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATC 111089
| || |||| | ||| |||||| || || || || | | || | |||
Sbjct 1849004 ACCGTGTGTGAAATATCTTTGTGACATCAAATTATAAGTTTCAATAACTCTTGGAATATC 1849063
Query 111090 TTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTC 111140
|||||||||||||||||| ||||||| ||| | | || ||| || ||||
Sbjct 1849064 TTTACCGTGAATACCAATAGCAACTCTCATAATTAAATGTTGTGGTCTTTC 1849114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974895670000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |