Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 232 8e-56
seq21 114 2e-20
seq3 98.7 1e-15
seq11 93.3 5e-14
>seq1
Length=2377843
Score = 232 bits (256), Expect = 8e-56
Identities = 1164/1817 (64%), Gaps = 63/1817 (3%)
Strand=Plus/Plus
Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655
|||||||| || ||||| | || | ||||| | || | ||||||| | | ||
Sbjct 1847385 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTA 1847444
Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCA 105715
||| |||||| || ||| || ||||| | |||| || |||||||| | |
Sbjct 1847445 CCCATAGTTGGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCT 1847504
Query 105716 CGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAGA 105773
| | || ||||||||||||| || || | ||| ||||||| || || ||| |
Sbjct 1847505 CTATCAGCAGCCATATCAATGATATGTTT--TTGTGAAATTTCCCAAACAGTCTTGTACA 1847562
Query 105774 GATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTG---A 105830
| |||||| ||||||||||| | || | | ||| || ||||| ||| |
Sbjct 1847563 AAGCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTG---TTGGAAA 1847619
Query 105831 CCATGAGATCCTTCATATCCTTGGACCAAAGACC--AATCTTCTTGAGATCATTGACGAG 105888
||| | ||||||| | | ||||| ||| |||| | | ||| || | |
Sbjct 1847620 TAATGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACC--AAATCCTTCA--AC 1847675
Query 105889 ATGCTTG--TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGT 105945
| | || |||||||| || || || || | |||||| ||| || ||||| |
Sbjct 1847676 AAGTATGGATTGACAATTTGGAATTCACCAGCCAAAACTCTTCT-AGAGTAAATGTTGGA 1847734
Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005
||||| ||||| || |||||||| |||||||||||||||| || || || ||||||||
Sbjct 1847735 AGTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCAT 1847794
Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATC 106065
||| || | ||| | ||| | | ||| | || || || || | | |||
Sbjct 1847795 TGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGCCATCTTTTGTTTCAAAGTATC 1847854
Query 106066 CCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG 106123
||| || || || || ||||||| |||| ||| |||||||| | | |||||
Sbjct 1847855 CCAATCCCATAATTCAG-TTGGTTTTCTGTTCC-ACAAGTCAAATTGTAATAAACCTTGA 1847912
Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183
|| | |||||||| | | |||||| ||||| | |||| ||||||
Sbjct 1847913 GAAGCTGGAGAACCTGGGTAACTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAA 1847972
Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243
| || | | || || || |||||||||||||| || || | || | |||||
Sbjct 1847973 GATTCAACAGCAGCATGGTAAATGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCT 1848032
Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303
| |||||||||| | | | | ||||| |||| || | ||||||||||||||||
Sbjct 1848033 TGAGAATCAAATGGCAATCTCAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAA 1848092
Query 106304 CCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCT-CAACGGGATAAAAATTTC 106361
|||| |||||||||| ||||||||| ||||| || ||| ||| || || | || |
Sbjct 1848093 GCAATTGGTCTGTGTCTCATATTAGATCTTTC-AGC-TTCTGGAACTGGGTAGTAGTTAC 1848150
Query 106362 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA- 106420
|| || |||| ||| | || || |||| || || | |||||| | |||||||
Sbjct 1848151 GATCGATAACTCTGTTCAAGTTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAA 1848210
Query 106421 --TAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGATTGATG 106472
| || |||| | | ||||| | ||| | ||| | || || || |
Sbjct 1848211 AGTTATACCAAGT---ATTGCTTTCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAG 1848267
Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532
|||| || |||||||| ||||| | | | || || | |||||| ||||||||
Sbjct 1848268 CCAAGTTACAAACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGT 1848327
Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592
||||| || || |||||||||||||||||| |||| |||| || ||||| || |
Sbjct 1848328 TGGAAGATTTGATGACACCCAAATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTAT 1848387
Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG-ACTTGAGAATTGCCTTCCACACATCG 106651
| | ||| | || || || || || || || | ||| || || || | ||| | |
Sbjct 1848388 ACAACATAAATGGAGTACCAGTTTCGGTTTGGGCACTCAAG-ATAGCGTACCATAATTTT 1848446
Query 106652 GCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709
||| || | || | | | || |||| ||||| | || || | |||
Sbjct 1848447 TGGGCTTTGATGGTTTGTC--TACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTT 1848504
Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769
|||| || ||||| | || || | |||||| || | | |||| |||| | || ||
Sbjct 1848505 CAAATTCATCACCGTAGACATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCC 1848564
Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829
| | ||| | ||||| | ||||||||| | ||||| ||||||| | || || |
Sbjct 1848565 AGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACA 1848624
Query 106830 GATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888
||||| | | || ||||| | ||| ||||| || | || | || || | |
Sbjct 1848625 AGTCTCTGGCTCTGA-TTTCTTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAG 1848683
Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 106944
||||| ||||||||| || | || | || | || || || | | ||| |
Sbjct 1848684 ATATCACTGTGCCATGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACC 1848742
Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004
||||| ||||| || || ||| ||| || || | | ||| ||||||||||| | ||
Sbjct 1848743 TTGATCAACATAACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGA 1848802
Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064
|||||| || || ||| || | ||| | | | |||||||||| ||
Sbjct 1848803 AGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACC 1848862
Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124
|||||| ||||| | ||| || ||| ||||| | | ||| | || ||||| |
Sbjct 1848863 AATACCACCAGCACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTC 1848922
Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC-TG--GACATCTGCGGTCTTGGTGT 107181
|| || || ||||| | || ||| ||| ||| || ||||| || |||||||| ||
Sbjct 1848923 AATGGAATCATCCTTCATAGC---AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGT 1848979
Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACATCTTGTCGT 107240
||| |||||||| | ||| | |||| |||| ||| | ||| |||||| | |
Sbjct 1848980 ACCGGCATTGAACAAACATGGGGAACCGTGTGTGAA-ATATCTTTGTGACATCAAATTAT 1849038
Query 107241 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACA 107300
| || || | || ||| |||| ||||| || || || || || | ||||| |
Sbjct 1849039 AAGTTTCAATAACTCTTGGAATATCTTTACCGTGAATACCAATAGCAACTCTCATAATTA 1849098
Query 107301 TGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGG 107359
| ||| ||| |||| | | || | || ||| | ||| | |||| || | |
Sbjct 1849099 AATGTTGTGGTCTTTCAGCAACTTTACCGTTGATACGTAACAAATATGATCTT-TCCATG 1849157
Query 107360 GTTTTGAGACCAAAGTA 107376
||||||| |||||||||
Sbjct 1849158 GTTTTGAAACCAAAGTA 1849174
Score = 84.2 bits (92), Expect = 3e-11
Identities = 197/289 (68%), Gaps = 15/289 (5%)
Strand=Plus/Plus
Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336
||||||| |||||||| || || | ||| || | || ||| ||||||||||| |
Sbjct 2272711 TATCAAACCCATCCATTTCAACTAACAATTGATTCAAGGTGGTTTCACGTTCATCATTAG 2272770
Query 9337 C-----TGGCA-TACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGA 9390
| | ||| | || || | ||||| || || | |||||||| ||||||| ||
Sbjct 2272771 CACCAGTTGCATTTCCTTTAGAA---CGTTGTTTACCAATAGCATCAATTTCATCAACGA 2272827
Query 9391 AGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGC 9450
| ||||| | || |||||| | || | | ||| | ||| ||||| ||| ||| |
Sbjct 2272828 AAACAATCGAAGGAGCATTTTCTCTAGCAGTCTTAAACAAATCACGAACTCTTGAGGCAC 2272887
Query 9451 CCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT-GAAGGGGACATT 9508
| |||||||| ||||| || ||||| | | |||| ||| | || ||| || |||
Sbjct 2272888 CTACACCAACGAACATTTCAACAAATTCAGAACCGGAGACA--GAATAGAATGGAACACC 2272945
Query 9509 AGATTCACCCGCA-ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556
|| |||||| ||| || || | | | ||| || ||||| ||||||||
Sbjct 2272946 AGCTTCACCAGCAGTTGCCTTAGCCAACAAG-GTTTTACCAGTACCTGG 2272993
>seq21
Length=244291
Score = 114 bits (126), Expect = 2e-20
Identities = 328/495 (66%), Gaps = 26/495 (5%)
Strand=Plus/Plus
Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006
|| || |||||||| ||||||||| || || ||||||| |||||| ||||| ||||||
Sbjct 7462 GTATAAGGTTCAAAACATTCATTAAATCCTAAAATTTGTGAGGTGGAAGCTGTAGGCATT 7521
Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG-ATGCGTTCCTTGAGAACATC 106065
||||| | |||||| || | | |||| | ||| |||| ||| ||||| ||
Sbjct 7522 GGTGCAACCAAAAGGGAATTTCTTA-ACCCAAATTTTTGAATGCTTTCTTTGAGTTTATT 7580
Query 106066 CCAGTCGTA---GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122
||||||||| || | || | | | ||||||||||||||| || | ||||
Sbjct 7581 CCAGTCGTACATCTTAGACGGAGTATGA---TTCCACATATCAAATTGTAGAATACCTTC 7637
Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT---CAGCCAATTCACA 106179
|| | || || || | ||| || ||||| | || | ||| || ||||||
Sbjct 7638 AGATGCAGGTGATCCTTGAAAAGTTTCATATGGTCC---GTCTTGAATAGATAATTCAAC 7694
Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239
|| || || | || || || || |||||||| || || ||| | | | | ||
Sbjct 7695 TGAAGCTTCAAGAGCCGCATGGTAGATTGTTTCAAATATCTGAATATTTAATTTCCTAGC 7754
Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAAAT-----AAATACATCCGCGAGACCTTGA 106294
| ||||| ||||||| ||||| | || | ||||| ||| || | ||||||
Sbjct 7755 AGCTTCTGATTCAAATG-GTAGC----CTAAGTTCGGCAAATAAATCTGCTAACCCTTGA 7809
Query 106295 ACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT-TTCGCGCAGTCTCAACGGGATA 106353
|||||||| |||| || | || || |||| || | |||| || |||||||| |||||
Sbjct 7810 ACACCCAAGGCAATTGGACGGTTACGTTTATTTGAGTATTCG-GCTGTCTCAACAGGATA 7868
Query 106354 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 106413
|| || || || ||| ||| | ||||| | | | ||| |||| ||| ||
Sbjct 7869 TAATGTTACATCGATCACTTTGTTCAAGTTTTTAGCCAACACCTTGGTGACAGAATGTAG 7928
Query 106414 TTTTTCATAATCAAA 106428
||| || |||||||
Sbjct 7929 TTTCTCGAAATCAAA 7943
>seq3
Length=1232947
Score = 98.7 bits (108), Expect = 1e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
|||||| | ||||| ||||| || || | ||||| || ||||||||| ||||||
Sbjct 1215398 TATGGTAGAGTTGCTCCACGTTCTGGATTAGCTGTTAAACATGGTATTTCTACTGGTGCT 1215457
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163
|||||||||||| | || ||| |||||||| ||||| ||| | || ||||| | ||
Sbjct 1215458 GGTGTTATTGATGCTGATTATCGTGGTGAAGTTAAAGTTGTTTTATTTAATCATAGTGAA 1215517
Query 155164 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202
||||| ||||| | || |||| ||| | || || |||
Sbjct 1215518 AAAGATTTTGAAATTAAACAAGGTGATAGAATTGCTCAA 1215556
>seq11
Length=485753
Score = 93.3 bits (102), Expect = 5e-14
Identities = 192/283 (68%), Gaps = 6/283 (2%)
Strand=Plus/Plus
Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336
|||||||||||||||| || || | ||| || | ||| | ||| |||||||||||
Sbjct 332799 TATCAAAACCATCCATTTCAACTAATAATTGATTCAAAGTATTTTCACGTTCATCATTTC 332858
Query 9337 CTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAA 9396
| || |||| || | || || || | ||||||||| ||||||| || | ||
Sbjct 332859 CACCAATTTTACCATTACCTCTTTCTTTACCAATGGCATCAATTTCATCAACAAAAATAA 332918
Query 9397 TACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACAC 9456
| |||| |||| | ||| ||| ||| | ||| ||||| ||| || || ||||
Sbjct 332919 TTGATGGGGCCATTTCTCTAGCGGTTTTAAATAAATCACGAACTCTTGAAGCACCAACAC 332978
Query 9457 CAACAAACATCTCCACAAAGTTTGCGGC-GGAACATTGGAT--GAAGGGGACATTAGATT 9513
|||||||||| || ||||| | | | | |||| ||| || || ||| || ||
Sbjct 332979 CAACAAACATTTCTACAAATTCAGAACCAGAAACA---GATAAAAATGGAACACCAGCTT 333035
Query 9514 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556
|||| ||| | ||| || | | ||| ||||| ||||||||
Sbjct 333036 CACCAGCAGTTGCTTTAGCTAATAAAGTTTTACCAGTACCTGG 333078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979693786000
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