Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 5e-27
>seq2
Length=1666313
Score = 136 bits (150), Expect = 5e-27
Identities = 273/394 (69%), Gaps = 18/394 (5%)
Strand=Plus/Minus
Query 154702 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAG 154759
|||| |||||||| | |||||||| |||| ||| || ||||| |||||||| |||
Sbjct 1326375 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 1326318
Query 154760 TGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819
||||| ||| | || |||||||||| || || ||| | ||||| || ||
Sbjct 1326317 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 1326258
Query 154820 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 154875
| ||||| || | ||||| | | || |||| || |||| || | |||||
Sbjct 1326257 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 1326202
Query 154876 TGATTACATACCCATCTACACATGGTGTATTTGAAAC---TAACATTAGACAGATATGTA 154932
||||||| || |||||||| ||||| |||||||| | | || ||| || ||| |
Sbjct 1326201 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCA--AGAGAGCTAT-TG 1326145
Query 154933 AGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGG 154992
| || |||||||| |||||||| || ||||||||||| || ||| | ||||| || |
Sbjct 1326144 ATATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAG 1326085
Query 154993 TAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAA 155052
| || || | ||| |||| | ||||| ||||| |||||| | || | |||||||
Sbjct 1326084 TTGGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAA 1326025
Query 155053 CATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 155086
| || | | ||||||||||| ||||| ||
Sbjct 1326024 CTTTTGCTTTGAGTCATGGAGGTGGTGGTCCAGG 1325991
Score = 134 bits (148), Expect = 2e-26
Identities = 194/274 (71%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805
||||||||| | |||| | ||||| |||||| |||| | || ||||| ||||| ||
Sbjct 1327349 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 1327290
Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865
||||||||| || ||||| || || ||| ||||| || || || |||||||| ||
Sbjct 1327289 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 1327230
Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925
| || |||||| ||| || ||| | | ||||| |||| |||||||| ||
Sbjct 1327229 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 1327170
Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985
||||| | ||||| ||||| || ||| ||||| || || || ||| || |||||||
Sbjct 1327169 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 1327110
Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019
|| |||| ||||| | ||||||||| ||
Sbjct 1327109 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 1327076
Score = 93.3 bits (102), Expect = 5e-14
Identities = 180/262 (69%), Gaps = 3/262 (1%)
Strand=Plus/Minus
Query 153168 AAAAATATAGCAAAAGCAAACAAAGTAAAACCTAGTCTT-ATAGGTCAAGGATACTATGG 153226
|||||| |||| || ||| ||| ||||| | ||| || ||| |||| || ||
Sbjct 1327941 AAAAAT-TAGCTAATAAAAATAAAATAAAAAA-ATCCTTCATTGGTAAAGGTTATGCCGG 1327884
Query 153227 AACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATC 153286
|||||| ||| || || || || |||| ||||||| ||| ||||| || ||
Sbjct 1327883 TACCATTTTACCACCTGTTATTCAAAGAAATCTTCTTGAATCTCCAGAATGGTATACTTC 1327824
Query 153287 TTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCA 153346
|||||| || |||||| | || || ||||| || ||||| | | || || || |||||
Sbjct 1327823 TTACACACCATATCAACCAGAAATTTCTCAAGGTAGATTAAATTCCTTGTTGAACTACCA 1327764
Query 153347 AACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGC 153406
||| | || || |||||||| || || || || || ||| ||||||||||||
Sbjct 1327763 AACTTTAATTACTTCCCTTACAGGTTTGGACATGGCTAATGCTTCTTTATTAGATGAAGG 1327704
Query 153407 AACTGCAGCAGCAGAAGCAATG 153428
|| || || | ||||| |||
Sbjct 1327703 TACCGCTGCTGGGGAAGCCATG 1327682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211713976000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |